Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 RNU6-106P-201ENST00000384405 107 ntBASIC1.2□□□□□ -2.22
VPS53Q5VIR6 PDCD5P2-201ENST00000507570 312 ntBASIC1.2□□□□□ -2.22
VPS53Q5VIR6 AC103810.9-201ENST00000606688 112 ntBASIC1.2□□□□□ -2.22
VPS53Q5VIR6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
VPS53Q5VIR6 RNU6-1313P-201ENST00000362622 102 ntBASIC1.19□□□□□ -2.22
VPS53Q5VIR6 RNU6-934P-201ENST00000365154 107 ntBASIC1.19□□□□□ -2.22
VPS53Q5VIR6 Y_RNA.448-201ENST00000384185 108 ntBASIC1.19□□□□□ -2.22
VPS53Q5VIR6 MIR200A-201ENST00000384875 90 ntBASIC1.19□□□□□ -2.22
VPS53Q5VIR6 RNU6-1321P-201ENST00000390905 107 ntBASIC1.19□□□□□ -2.22
VPS53Q5VIR6 RNU6-679P-201ENST00000391003 106 ntBASIC1.19□□□□□ -2.22
VPS53Q5VIR6 MIR1302-5-201ENST00000408164 150 ntBASIC1.19□□□□□ -2.22
VPS53Q5VIR6 SNORA7.5-201ENST00000410672 110 ntBASIC1.19□□□□□ -2.22
VPS53Q5VIR6 AL353813.1-201ENST00000440700 253 ntBASIC1.19□□□□□ -2.22
VPS53Q5VIR6 snoU13.21-201ENST00000459368 105 ntBASIC1.19□□□□□ -2.22
VPS53Q5VIR6 AC133485.1-201ENST00000567176 124 ntBASIC1.19□□□□□ -2.22
VPS53Q5VIR6 MIR4694-201ENST00000578534 80 ntBASIC1.19□□□□□ -2.22
VPS53Q5VIR6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.19□□□□□ -2.22
VPS53Q5VIR6 SNORA63.4-201ENST00000362763 126 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 Y_RNA.78-201ENST00000362970 110 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 Y_RNA.98-201ENST00000363109 102 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 RNU6-865P-201ENST00000364772 107 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 RNY1P2-201ENST00000364820 117 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 SNORD114-24-201ENST00000365029 72 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 Y_RNA.328-201ENST00000365208 113 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 Y_RNA.360-201ENST00000365512 102 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 Y_RNA.377-201ENST00000365644 108 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 RNU6-1307P-201ENST00000391012 103 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 RNU6-554P-201ENST00000410466 106 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 AC096949.1-201ENST00000412047 152 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 RNU7-48P-201ENST00000458875 63 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 RNU7-185P-201ENST00000459215 60 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 UBL5P1-201ENST00000507979 193 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 uc_338.28-201ENST00000612082 187 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 AC105081.1-201ENST00000617727 106 ntBASIC1.18□□□□□ -2.22
VPS53Q5VIR6 MIR605-201ENST00000385078 83 ntBASIC1.17□□□□□ -2.22
VPS53Q5VIR6 MIR1257-201ENST00000408490 117 ntBASIC1.17□□□□□ -2.22
VPS53Q5VIR6 MIR1276-201ENST00000408707 83 ntBASIC1.17□□□□□ -2.22
VPS53Q5VIR6 RNU6-994P-201ENST00000410507 111 ntBASIC1.17□□□□□ -2.22
VPS53Q5VIR6 SNORD83.1-201ENST00000411362 77 ntBASIC1.17□□□□□ -2.22
VPS53Q5VIR6 RPS26P5-201ENST00000418544 335 ntBASIC1.17□□□□□ -2.22
VPS53Q5VIR6 MIR4661-201ENST00000582720 75 ntBASIC1.17□□□□□ -2.22
VPS53Q5VIR6 RNY3P2-201ENST00000362918 102 ntBASIC1.16□□□□□ -2.22
VPS53Q5VIR6 RNU1-36P-201ENST00000365130 165 ntBASIC1.16□□□□□ -2.22
VPS53Q5VIR6 RNU6-1113P-201ENST00000384348 107 ntBASIC1.16□□□□□ -2.22
VPS53Q5VIR6 SNORD93-201ENST00000408813 74 ntBASIC1.16□□□□□ -2.22
VPS53Q5VIR6 AL031737.1-201ENST00000450125 223 ntBASIC1.16□□□□□ -2.22
VPS53Q5VIR6 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.16□□□□□ -2.22
VPS53Q5VIR6 AP001362.1-201ENST00000625165 124 ntBASIC1.16□□□□□ -2.22
VPS53Q5VIR6 AC023934.1-201ENST00000574529 2389 ntBASIC1.16□□□□□ -2.22
VPS53Q5VIR6 RNU6-1201P-201ENST00000384227 107 ntBASIC1.15□□□□□ -2.23
VPS53Q5VIR6 MIR577-201ENST00000385196 96 ntBASIC1.15□□□□□ -2.23
VPS53Q5VIR6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
VPS53Q5VIR6 AC138749.4-201ENST00000563970 127 ntBASIC1.15□□□□□ -2.23
VPS53Q5VIR6 MIR4771-2-201ENST00000577758 74 ntBASIC1.15□□□□□ -2.23
VPS53Q5VIR6 MIR4771-1-201ENST00000582617 74 ntBASIC1.15□□□□□ -2.23
VPS53Q5VIR6 MIR376B-201ENST00000614515 100 ntBASIC1.15□□□□□ -2.23
VPS53Q5VIR6 AL512310.12-203ENST00000640543 90 ntBASIC1.15□□□□□ -2.23
VPS53Q5VIR6 RNU6-766P-201ENST00000362478 107 ntBASIC1.14□□□□□ -2.23
VPS53Q5VIR6 RNU6-369P-201ENST00000362515 102 ntBASIC1.14□□□□□ -2.23
VPS53Q5VIR6 RNU6-832P-201ENST00000363319 107 ntBASIC1.14□□□□□ -2.23
VPS53Q5VIR6 RNU6-1099P-201ENST00000363533 107 ntBASIC1.14□□□□□ -2.23
VPS53Q5VIR6 RNU6-153P-201ENST00000364422 104 ntBASIC1.14□□□□□ -2.23
VPS53Q5VIR6 MIR125B2-201ENST00000385128 89 ntBASIC1.14□□□□□ -2.23
VPS53Q5VIR6 Y_RNA.588-201ENST00000391254 102 ntBASIC1.14□□□□□ -2.23
VPS53Q5VIR6 AC067940.1-201ENST00000458411 300 ntBASIC1.14□□□□□ -2.23
VPS53Q5VIR6 MIR3973-201ENST00000579824 107 ntBASIC1.14□□□□□ -2.23
VPS53Q5VIR6 MIR4491-201ENST00000581087 68 ntBASIC1.14□□□□□ -2.23
VPS53Q5VIR6 AL442128.1-201ENST00000615151 90 ntBASIC1.14□□□□□ -2.23
VPS53Q5VIR6 MIR373-201ENST00000362273 69 ntBASIC1.13□□□□□ -2.23
VPS53Q5VIR6 Y_RNA.10-201ENST00000362371 110 ntBASIC1.13□□□□□ -2.23
VPS53Q5VIR6 RNA5SP133-201ENST00000363368 119 ntBASIC1.13□□□□□ -2.23
VPS53Q5VIR6 RNU4-36P-201ENST00000364294 144 ntBASIC1.13□□□□□ -2.23
VPS53Q5VIR6 RNU1-93P-201ENST00000364704 169 ntBASIC1.13□□□□□ -2.23
VPS53Q5VIR6 MIR34C-201ENST00000384831 77 ntBASIC1.13□□□□□ -2.23
VPS53Q5VIR6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.13□□□□□ -2.23
VPS53Q5VIR6 MTATP6P29-201ENST00000415057 132 ntBASIC1.13□□□□□ -2.23
VPS53Q5VIR6 RNU6-904P-201ENST00000516206 101 ntBASIC1.13□□□□□ -2.23
VPS53Q5VIR6 RNU6-1006P-201ENST00000516998 103 ntBASIC1.13□□□□□ -2.23
VPS53Q5VIR6 AC141557.1-201ENST00000540982 400 ntBASIC1.13□□□□□ -2.23
VPS53Q5VIR6 MIR4676-201ENST00000583078 72 ntBASIC1.13□□□□□ -2.23
VPS53Q5VIR6 AC020891.4-201ENST00000605745 93 ntBASIC1.13□□□□□ -2.23
VPS53Q5VIR6 U6.109-201ENST00000636749 87 ntBASIC1.13□□□□□ -2.23
VPS53Q5VIR6 MIR1-1-201ENST00000362147 71 ntBASIC1.12□□□□□ -2.23
VPS53Q5VIR6 SNORD38.1-201ENST00000363863 68 ntBASIC1.12□□□□□ -2.23
VPS53Q5VIR6 Y_RNA.224-201ENST00000364308 111 ntBASIC1.12□□□□□ -2.23
VPS53Q5VIR6 RNU6-147P-201ENST00000383983 107 ntBASIC1.12□□□□□ -2.23
VPS53Q5VIR6 RNU6-756P-201ENST00000383997 107 ntBASIC1.12□□□□□ -2.23
VPS53Q5VIR6 SNORA51.5-201ENST00000384126 131 ntBASIC1.12□□□□□ -2.23
VPS53Q5VIR6 MIR499A-201ENST00000384903 122 ntBASIC1.12□□□□□ -2.23
VPS53Q5VIR6 MIR1827-201ENST00000408549 66 ntBASIC1.12□□□□□ -2.23
VPS53Q5VIR6 RNU4-83P-201ENST00000410863 133 ntBASIC1.12□□□□□ -2.23
VPS53Q5VIR6 RNA5SP247-201ENST00000411181 105 ntBASIC1.12□□□□□ -2.23
VPS53Q5VIR6 FABP5P4-201ENST00000437203 171 ntBASIC1.12□□□□□ -2.23
VPS53Q5VIR6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS53Q5VIR6 SNORD124-201ENST00000459577 104 ntBASIC1.12□□□□□ -2.23
VPS53Q5VIR6 DEFB131E-201ENST00000532329 154 ntBASIC1.12□□□□□ -2.23
VPS53Q5VIR6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.12□□□□□ -2.23
VPS53Q5VIR6 Y_RNA.191-201ENST00000363972 113 ntBASIC1.11□□□□□ -2.23
VPS53Q5VIR6 SNORD38.2-201ENST00000384470 69 ntBASIC1.11□□□□□ -2.23
VPS53Q5VIR6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms