Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 RNU6-1234P-201ENST00000516877 103 ntBASIC0.71□□□□□ -2.3
RUNDC3AQ59EK9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.71□□□□□ -2.3
RUNDC3AQ59EK9 SNORD115-19-201ENST00000363098 82 ntBASIC0.7□□□□□ -2.3
RUNDC3AQ59EK9 SNORD115-18-201ENST00000363293 82 ntBASIC0.7□□□□□ -2.3
RUNDC3AQ59EK9 SNORD115-17-201ENST00000364612 82 ntBASIC0.7□□□□□ -2.3
RUNDC3AQ59EK9 SNORA36.2-201ENST00000384004 127 ntBASIC0.7□□□□□ -2.3
RUNDC3AQ59EK9 Y_RNA.448-201ENST00000384185 108 ntBASIC0.7□□□□□ -2.3
RUNDC3AQ59EK9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.7□□□□□ -2.3
RUNDC3AQ59EK9 RNU7-107P-201ENST00000459121 61 ntBASIC0.7□□□□□ -2.3
RUNDC3AQ59EK9 MTND5P34-201ENST00000568888 325 ntBASIC0.7□□□□□ -2.3
RUNDC3AQ59EK9 AC025166.1-201ENST00000612411 163 ntBASIC0.7□□□□□ -2.3
RUNDC3AQ59EK9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.7□□□□□ -2.3
RUNDC3AQ59EK9 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
RUNDC3AQ59EK9 Y_RNA.218-201ENST00000364218 104 ntBASIC0.69□□□□□ -2.3
RUNDC3AQ59EK9 Y_RNA.525-201ENST00000384570 113 ntBASIC0.69□□□□□ -2.3
RUNDC3AQ59EK9 Y_RNA.630-201ENST00000411370 108 ntBASIC0.69□□□□□ -2.3
RUNDC3AQ59EK9 RNU7-2P-201ENST00000516096 62 ntBASIC0.69□□□□□ -2.3
RUNDC3AQ59EK9 DEFB131E-201ENST00000532329 154 ntBASIC0.69□□□□□ -2.3
RUNDC3AQ59EK9 Y_RNA.773-201ENST00000607168 90 ntBASIC0.69□□□□□ -2.3
RUNDC3AQ59EK9 Y_RNA.32-201ENST00000362589 110 ntBASIC0.68□□□□□ -2.3
RUNDC3AQ59EK9 RNU4-58P-201ENST00000363192 141 ntBASIC0.68□□□□□ -2.3
RUNDC3AQ59EK9 Y_RNA.119-201ENST00000363301 96 ntBASIC0.68□□□□□ -2.3
RUNDC3AQ59EK9 RNY1P2-201ENST00000364820 117 ntBASIC0.68□□□□□ -2.3
RUNDC3AQ59EK9 RNU4-45P-201ENST00000365469 141 ntBASIC0.68□□□□□ -2.3
RUNDC3AQ59EK9 RNU6-291P-201ENST00000384720 107 ntBASIC0.68□□□□□ -2.3
RUNDC3AQ59EK9 MIR548M-201ENST00000408260 86 ntBASIC0.68□□□□□ -2.3
RUNDC3AQ59EK9 Y_RNA.697-201ENST00000516776 113 ntBASIC0.68□□□□□ -2.3
RUNDC3AQ59EK9 AL078603.1-201ENST00000603824 313 ntBASIC0.68□□□□□ -2.3
RUNDC3AQ59EK9 MTND5P18-201ENST00000445624 1801 ntBASIC0.68□□□□□ -2.3
RUNDC3AQ59EK9 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
RUNDC3AQ59EK9 RNA5SP117-201ENST00000365294 118 ntBASIC0.67□□□□□ -2.3
RUNDC3AQ59EK9 Y_RNA.536-201ENST00000384621 113 ntBASIC0.67□□□□□ -2.3
RUNDC3AQ59EK9 MIR140-201ENST00000385282 100 ntBASIC0.67□□□□□ -2.3
RUNDC3AQ59EK9 RNU7-48P-201ENST00000458875 63 ntBASIC0.67□□□□□ -2.3
RUNDC3AQ59EK9 RNU6-1194P-201ENST00000516208 104 ntBASIC0.67□□□□□ -2.3
RUNDC3AQ59EK9 uc_338.16-201ENST00000621804 95 ntBASIC0.67□□□□□ -2.3
RUNDC3AQ59EK9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
RUNDC3AQ59EK9 SNORD115-35-201ENST00000365122 82 ntBASIC0.66□□□□□ -2.3
RUNDC3AQ59EK9 MIR548D2-201ENST00000384955 97 ntBASIC0.66□□□□□ -2.3
RUNDC3AQ59EK9 MIR759-201ENST00000390224 91 ntBASIC0.66□□□□□ -2.3
RUNDC3AQ59EK9 SUMO1P3-201ENST00000439961 304 ntBASIC0.66□□□□□ -2.3
RUNDC3AQ59EK9 SNORA31.14-201ENST00000516728 116 ntBASIC0.66□□□□□ -2.3
RUNDC3AQ59EK9 MIR6734-201ENST00000621166 68 ntBASIC0.66□□□□□ -2.3
RUNDC3AQ59EK9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.66□□□□□ -2.3
RUNDC3AQ59EK9 MIR1255B1-201ENST00000636325 63 ntBASIC0.66□□□□□ -2.3
RUNDC3AQ59EK9 AL157777.2-201ENST00000258070 137 ntBASIC0.65□□□□□ -2.31
RUNDC3AQ59EK9 RNU6-80P-201ENST00000384195 107 ntBASIC0.65□□□□□ -2.31
RUNDC3AQ59EK9 RNU6-535P-201ENST00000384722 107 ntBASIC0.65□□□□□ -2.31
RUNDC3AQ59EK9 MIR548J-201ENST00000408833 112 ntBASIC0.65□□□□□ -2.31
RUNDC3AQ59EK9 MIR3678-201ENST00000578455 94 ntBASIC0.65□□□□□ -2.31
RUNDC3AQ59EK9 MIR644A-201ENST00000385262 94 ntBASIC0.64□□□□□ -2.31
RUNDC3AQ59EK9 AC004941.2-201ENST00000427009 228 ntBASIC0.64□□□□□ -2.31
RUNDC3AQ59EK9 CYP3A137P-201ENST00000562436 69 ntBASIC0.64□□□□□ -2.31
RUNDC3AQ59EK9 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
RUNDC3AQ59EK9 MIR376B-201ENST00000614515 100 ntBASIC0.64□□□□□ -2.31
RUNDC3AQ59EK9 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
RUNDC3AQ59EK9 Y_RNA.71-201ENST00000362892 104 ntBASIC0.63□□□□□ -2.31
RUNDC3AQ59EK9 Y_RNA.98-201ENST00000363109 102 ntBASIC0.63□□□□□ -2.31
RUNDC3AQ59EK9 Y_RNA.127-201ENST00000363386 109 ntBASIC0.63□□□□□ -2.31
RUNDC3AQ59EK9 RNU6-865P-201ENST00000364772 107 ntBASIC0.63□□□□□ -2.31
RUNDC3AQ59EK9 Y_RNA.328-201ENST00000365208 113 ntBASIC0.63□□□□□ -2.31
RUNDC3AQ59EK9 Y_RNA.346-201ENST00000365385 112 ntBASIC0.63□□□□□ -2.31
RUNDC3AQ59EK9 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
RUNDC3AQ59EK9 Y_RNA.712-201ENST00000517011 92 ntBASIC0.63□□□□□ -2.31
RUNDC3AQ59EK9 AP001362.1-201ENST00000625165 124 ntBASIC0.63□□□□□ -2.31
RUNDC3AQ59EK9 MIR3914-2-201ENST00000637339 95 ntBASIC0.63□□□□□ -2.31
RUNDC3AQ59EK9 Y_RNA.174-201ENST00000363781 105 ntBASIC0.62□□□□□ -2.31
RUNDC3AQ59EK9 Y_RNA.344-201ENST00000365381 112 ntBASIC0.62□□□□□ -2.31
RUNDC3AQ59EK9 RNU6-429P-201ENST00000384582 108 ntBASIC0.62□□□□□ -2.31
RUNDC3AQ59EK9 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
RUNDC3AQ59EK9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.62□□□□□ -2.31
RUNDC3AQ59EK9 RNU6-659P-201ENST00000516454 104 ntBASIC0.62□□□□□ -2.31
RUNDC3AQ59EK9 RNU6-521P-201ENST00000516663 105 ntBASIC0.62□□□□□ -2.31
RUNDC3AQ59EK9 RNA5SP94-201ENST00000516917 108 ntBASIC0.62□□□□□ -2.31
RUNDC3AQ59EK9 MIR6788-201ENST00000618842 66 ntBASIC0.62□□□□□ -2.31
RUNDC3AQ59EK9 RNA5SP245-201ENST00000364239 121 ntBASIC0.61□□□□□ -2.31
RUNDC3AQ59EK9 RNU6-679P-201ENST00000391003 106 ntBASIC0.61□□□□□ -2.31
RUNDC3AQ59EK9 RNA5SP220-201ENST00000516298 104 ntBASIC0.61□□□□□ -2.31
RUNDC3AQ59EK9 AC138907.6-201ENST00000568401 126 ntBASIC0.61□□□□□ -2.31
RUNDC3AQ59EK9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
RUNDC3AQ59EK9 MIR101-2-201ENST00000362195 79 ntBASIC0.6□□□□□ -2.31
RUNDC3AQ59EK9 SNORA63.5-201ENST00000363548 123 ntBASIC0.6□□□□□ -2.31
RUNDC3AQ59EK9 RNY4P6-201ENST00000363667 96 ntBASIC0.6□□□□□ -2.31
RUNDC3AQ59EK9 SNORD18A-201ENST00000363753 72 ntBASIC0.6□□□□□ -2.31
RUNDC3AQ59EK9 SNORD116-14-201ENST00000383894 92 ntBASIC0.6□□□□□ -2.31
RUNDC3AQ59EK9 SNORD116-17-201ENST00000383929 92 ntBASIC0.6□□□□□ -2.31
RUNDC3AQ59EK9 SNORD116-15-201ENST00000384445 92 ntBASIC0.6□□□□□ -2.31
RUNDC3AQ59EK9 SNORD116-19-201ENST00000384729 92 ntBASIC0.6□□□□□ -2.31
RUNDC3AQ59EK9 MIR34C-201ENST00000384831 77 ntBASIC0.6□□□□□ -2.31
RUNDC3AQ59EK9 RNU6-469P-201ENST00000516253 101 ntBASIC0.6□□□□□ -2.31
RUNDC3AQ59EK9 MIR4500-201ENST00000579472 76 ntBASIC0.6□□□□□ -2.31
RUNDC3AQ59EK9 MIR151B-201ENST00000584249 96 ntBASIC0.6□□□□□ -2.31
RUNDC3AQ59EK9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
RUNDC3AQ59EK9 Y_RNA.56-201ENST00000362798 112 ntBASIC0.59□□□□□ -2.31
RUNDC3AQ59EK9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.59□□□□□ -2.31
RUNDC3AQ59EK9 TMSB4XP3-201ENST00000445144 114 ntBASIC0.59□□□□□ -2.31
RUNDC3AQ59EK9 SNORD33.1-201ENST00000516213 88 ntBASIC0.59□□□□□ -2.31
RUNDC3AQ59EK9 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
RUNDC3AQ59EK9 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
RUNDC3AQ59EK9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms