Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.87□□□□□ -2.87
CCDC58Q4VC31 RNU6-695P-201ENST00000391157 104 ntBASIC-2.87□□□□□ -2.87
CCDC58Q4VC31 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.87□□□□□ -2.87
CCDC58Q4VC31 FGF7P4-201ENST00000509595 295 ntBASIC-2.87□□□□□ -2.87
CCDC58Q4VC31 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-2.87□□□□□ -2.87
CCDC58Q4VC31 U6.96-201ENST00000636425 70 ntBASIC-2.87□□□□□ -2.87
CCDC58Q4VC31 Y_RNA.2-201ENST00000362330 96 ntBASIC-2.88□□□□□ -2.87
CCDC58Q4VC31 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.88□□□□□ -2.87
CCDC58Q4VC31 Y_RNA.481-201ENST00000384373 102 ntBASIC-2.88□□□□□ -2.87
CCDC58Q4VC31 MIR496-201ENST00000385226 102 ntBASIC-2.88□□□□□ -2.87
CCDC58Q4VC31 SNORA69.1-201ENST00000390904 137 ntBASIC-2.88□□□□□ -2.87
CCDC58Q4VC31 RNU7-113P-201ENST00000459273 62 ntBASIC-2.88□□□□□ -2.87
CCDC58Q4VC31 MIR3942-201ENST00000585264 109 ntBASIC-2.88□□□□□ -2.87
CCDC58Q4VC31 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.89□□□□□ -2.87
CCDC58Q4VC31 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.89□□□□□ -2.87
CCDC58Q4VC31 RNU6-1248P-201ENST00000391096 64 ntBASIC-2.89□□□□□ -2.87
CCDC58Q4VC31 SNORD19-201ENST00000391191 68 ntBASIC-2.89□□□□□ -2.87
CCDC58Q4VC31 AC107399.1-201ENST00000451226 265 ntBASIC-2.89□□□□□ -2.87
CCDC58Q4VC31 RNU6-850P-201ENST00000516934 103 ntBASIC-2.89□□□□□ -2.87
CCDC58Q4VC31 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.89□□□□□ -2.87
CCDC58Q4VC31 Y_RNA.127-201ENST00000363386 109 ntBASIC-2.9□□□□□ -2.87
CCDC58Q4VC31 RNU6-194P-201ENST00000363862 105 ntBASIC-2.9□□□□□ -2.87
CCDC58Q4VC31 Y_RNA.296-201ENST00000364930 108 ntBASIC-2.9□□□□□ -2.87
CCDC58Q4VC31 RNU6-232P-201ENST00000517144 64 ntBASIC-2.9□□□□□ -2.87
CCDC58Q4VC31 MRPS36P3-201ENST00000519284 130 ntBASIC-2.9□□□□□ -2.87
CCDC58Q4VC31 AC133104.2-201ENST00000615272 193 ntBASIC-2.9□□□□□ -2.87
CCDC58Q4VC31 MIR3662-201ENST00000637030 95 ntBASIC-2.9□□□□□ -2.87
CCDC58Q4VC31 RNU6-841P-201ENST00000383872 107 ntBASIC-2.91□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.618-201ENST00000410949 107 ntBASIC-2.91□□□□□ -2.88
CCDC58Q4VC31 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.91□□□□□ -2.88
CCDC58Q4VC31 MIR4724-201ENST00000579485 89 ntBASIC-2.91□□□□□ -2.88
CCDC58Q4VC31 MIR548AM-201ENST00000584298 74 ntBASIC-2.91□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.804-201ENST00000615262 101 ntBASIC-2.91□□□□□ -2.88
CCDC58Q4VC31 AP001362.1-201ENST00000625165 124 ntBASIC-2.91□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.98-201ENST00000363109 102 ntBASIC-2.92□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.448-201ENST00000384185 108 ntBASIC-2.92□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.577-201ENST00000384794 101 ntBASIC-2.92□□□□□ -2.88
CCDC58Q4VC31 RNU6-1156P-201ENST00000410365 100 ntBASIC-2.92□□□□□ -2.88
CCDC58Q4VC31 MIR1270-201ENST00000459320 83 ntBASIC-2.92□□□□□ -2.88
CCDC58Q4VC31 RNU6-1129P-201ENST00000515964 104 ntBASIC-2.92□□□□□ -2.88
CCDC58Q4VC31 MIR548AE2-201ENST00000583456 67 ntBASIC-2.92□□□□□ -2.88
CCDC58Q4VC31 AC097639.2-201ENST00000603159 172 ntBASIC-2.92□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.105-201ENST00000363182 111 ntBASIC-2.93□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.383-201ENST00000383855 97 ntBASIC-2.93□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.432-201ENST00000384087 111 ntBASIC-2.93□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.93□□□□□ -2.88
CCDC58Q4VC31 MT-TH-201ENST00000387441 69 ntBASIC-2.93□□□□□ -2.88
CCDC58Q4VC31 RNU6-1057P-201ENST00000517162 102 ntBASIC-2.93□□□□□ -2.88
CCDC58Q4VC31 AC087741.2-201ENST00000619415 172 ntBASIC-2.93□□□□□ -2.88
CCDC58Q4VC31 RNU6-774P-201ENST00000363238 107 ntBASIC-2.94□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.473-201ENST00000384333 102 ntBASIC-2.94□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.542-201ENST00000384641 111 ntBASIC-2.94□□□□□ -2.88
CCDC58Q4VC31 RNU6-1307P-201ENST00000391012 103 ntBASIC-2.94□□□□□ -2.88
CCDC58Q4VC31 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.94□□□□□ -2.88
CCDC58Q4VC31 RNA5SP144-201ENST00000410846 116 ntBASIC-2.94□□□□□ -2.88
CCDC58Q4VC31 ELOCP20-201ENST00000422460 345 ntBASIC-2.94□□□□□ -2.88
CCDC58Q4VC31 RNU7-125P-201ENST00000458760 62 ntBASIC-2.94□□□□□ -2.88
CCDC58Q4VC31 MIR4528-201ENST00000577763 90 ntBASIC-2.94□□□□□ -2.88
CCDC58Q4VC31 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.94□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.95□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.521-201ENST00000384560 114 ntBASIC-2.95□□□□□ -2.88
CCDC58Q4VC31 MIR206-201ENST00000384872 86 ntBASIC-2.95□□□□□ -2.88
CCDC58Q4VC31 AC009161.1-201ENST00000417306 376 ntBASIC-2.95□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.95□□□□□ -2.88
CCDC58Q4VC31 RNU6-273P-201ENST00000516937 96 ntBASIC-2.95□□□□□ -2.88
CCDC58Q4VC31 MIR3123-201ENST00000583417 75 ntBASIC-2.95□□□□□ -2.88
CCDC58Q4VC31 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.95□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.120-201ENST00000363304 110 ntBASIC-2.96□□□□□ -2.88
CCDC58Q4VC31 MT-TM-201ENST00000387377 68 ntBASIC-2.96□□□□□ -2.88
CCDC58Q4VC31 RNU4-88P-201ENST00000411220 86 ntBASIC-2.96□□□□□ -2.88
CCDC58Q4VC31 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-2.96□□□□□ -2.88
CCDC58Q4VC31 RNU6-1299P-201ENST00000516316 100 ntBASIC-2.96□□□□□ -2.88
CCDC58Q4VC31 MIR4696-201ENST00000581431 70 ntBASIC-2.96□□□□□ -2.88
CCDC58Q4VC31 TPTEP1-208ENST00000636884 213 ntBASIC-2.96□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.409-201ENST00000383990 98 ntBASIC-2.97□□□□□ -2.88
CCDC58Q4VC31 SNORA26.8-201ENST00000391306 124 ntBASIC-2.97□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.594-201ENST00000410373 140 ntBASIC-2.97□□□□□ -2.88
CCDC58Q4VC31 RNA5SP153-201ENST00000516498 76 ntBASIC-2.97□□□□□ -2.88
CCDC58Q4VC31 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.97□□□□□ -2.88
CCDC58Q4VC31 MIR3129-201ENST00000581095 76 ntBASIC-2.97□□□□□ -2.88
CCDC58Q4VC31 Z69908.1-201ENST00000622603 247 ntBASIC-2.97□□□□□ -2.88
CCDC58Q4VC31 RNU6-957P-201ENST00000363652 99 ntBASIC-2.98□□□□□ -2.89
CCDC58Q4VC31 SNORD101-201ENST00000384027 73 ntBASIC-2.98□□□□□ -2.89
CCDC58Q4VC31 RNU6-763P-201ENST00000390865 106 ntBASIC-2.98□□□□□ -2.89
CCDC58Q4VC31 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.98□□□□□ -2.89
CCDC58Q4VC31 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.98□□□□□ -2.89
CCDC58Q4VC31 SEPT14P3-201ENST00000439401 183 ntBASIC-2.98□□□□□ -2.89
CCDC58Q4VC31 AL732372.2-207ENST00000445840 183 ntBASIC-2.98□□□□□ -2.89
CCDC58Q4VC31 SEPT14P2-201ENST00000453405 183 ntBASIC-2.98□□□□□ -2.89
CCDC58Q4VC31 Y_RNA.677-201ENST00000516401 85 ntBASIC-2.98□□□□□ -2.89
CCDC58Q4VC31 FO082796.1-201ENST00000523795 183 ntBASIC-2.98□□□□□ -2.89
CCDC58Q4VC31 MIR3915-201ENST00000578518 97 ntBASIC-2.98□□□□□ -2.89
CCDC58Q4VC31 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.98□□□□□ -2.89
CCDC58Q4VC31 RNU6-99P-201ENST00000364721 107 ntBASIC-2.99□□□□□ -2.89
CCDC58Q4VC31 Y_RNA.462-201ENST00000384268 102 ntBASIC-2.99□□□□□ -2.89
CCDC58Q4VC31 RNU6-1254P-201ENST00000391266 104 ntBASIC-2.99□□□□□ -2.89
CCDC58Q4VC31 MIR1255B2-201ENST00000408618 67 ntBASIC-2.99□□□□□ -2.89
CCDC58Q4VC31 RNU6-864P-201ENST00000516256 108 ntBASIC-2.99□□□□□ -2.89
CCDC58Q4VC31 RNU6-1088P-201ENST00000516850 104 ntBASIC-2.99□□□□□ -2.89
CCDC58Q4VC31 AC103591.3-201ENST00000608684 209 ntBASIC-2.99□□□□□ -2.89
Retrieved 100 of 98,524 protein–RNA pairs in 230.8 ms