Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
ATP2B3Q16720 RNU6-363P-201ENST00000362895 105 ntBASIC1.24□□□□□ -2.21
ATP2B3Q16720 Y_RNA.116-201ENST00000363292 103 ntBASIC1.24□□□□□ -2.21
ATP2B3Q16720 SNORD114-10-201ENST00000363409 72 ntBASIC1.24□□□□□ -2.21
ATP2B3Q16720 Y_RNA.224-201ENST00000364308 111 ntBASIC1.24□□□□□ -2.21
ATP2B3Q16720 RNU4-38P-201ENST00000364472 129 ntBASIC1.24□□□□□ -2.21
ATP2B3Q16720 MIR34C-201ENST00000384831 77 ntBASIC1.24□□□□□ -2.21
ATP2B3Q16720 RNU6-554P-201ENST00000410466 106 ntBASIC1.24□□□□□ -2.21
ATP2B3Q16720 UBL5P1-201ENST00000507979 193 ntBASIC1.24□□□□□ -2.21
ATP2B3Q16720 RNA5SP404-201ENST00000517118 132 ntBASIC1.24□□□□□ -2.21
ATP2B3Q16720 MIR5009-201ENST00000578736 100 ntBASIC1.24□□□□□ -2.21
ATP2B3Q16720 U6.109-201ENST00000636749 87 ntBASIC1.24□□□□□ -2.21
ATP2B3Q16720 RNU6-403P-201ENST00000363163 104 ntBASIC1.23□□□□□ -2.21
ATP2B3Q16720 RNU1-36P-201ENST00000365130 165 ntBASIC1.23□□□□□ -2.21
ATP2B3Q16720 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
ATP2B3Q16720 RNU6-1014P-201ENST00000383940 103 ntBASIC1.23□□□□□ -2.21
ATP2B3Q16720 RNU6-409P-201ENST00000384114 104 ntBASIC1.23□□□□□ -2.21
ATP2B3Q16720 RNU6-106P-201ENST00000384405 107 ntBASIC1.23□□□□□ -2.21
ATP2B3Q16720 Y_RNA.507-201ENST00000384500 99 ntBASIC1.23□□□□□ -2.21
ATP2B3Q16720 MIR19B1-201ENST00000384829 87 ntBASIC1.23□□□□□ -2.21
ATP2B3Q16720 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
ATP2B3Q16720 Y_RNA.588-201ENST00000391254 102 ntBASIC1.23□□□□□ -2.21
ATP2B3Q16720 MIR18B-201ENST00000454574 71 ntBASIC1.23□□□□□ -2.21
ATP2B3Q16720 SNORA25.16-201ENST00000516741 121 ntBASIC1.23□□□□□ -2.21
ATP2B3Q16720 AC138749.4-201ENST00000563970 127 ntBASIC1.23□□□□□ -2.21
ATP2B3Q16720 MIR4491-201ENST00000581087 68 ntBASIC1.23□□□□□ -2.21
ATP2B3Q16720 MIR376B-201ENST00000614515 100 ntBASIC1.23□□□□□ -2.21
ATP2B3Q16720 MIR450A1-201ENST00000362262 91 ntBASIC1.22□□□□□ -2.21
ATP2B3Q16720 RNA5SP133-201ENST00000363368 119 ntBASIC1.22□□□□□ -2.21
ATP2B3Q16720 Y_RNA.247-201ENST00000364500 92 ntBASIC1.22□□□□□ -2.21
ATP2B3Q16720 Y_RNA.309-201ENST00000365046 111 ntBASIC1.22□□□□□ -2.21
ATP2B3Q16720 Y_RNA.360-201ENST00000365512 102 ntBASIC1.22□□□□□ -2.21
ATP2B3Q16720 SNORA72.6-201ENST00000384520 129 ntBASIC1.22□□□□□ -2.21
ATP2B3Q16720 MIR1257-201ENST00000408490 117 ntBASIC1.22□□□□□ -2.21
ATP2B3Q16720 RNU6-733P-201ENST00000410759 104 ntBASIC1.22□□□□□ -2.21
ATP2B3Q16720 RPS26P5-201ENST00000418544 335 ntBASIC1.22□□□□□ -2.21
ATP2B3Q16720 RNU7-48P-201ENST00000458875 63 ntBASIC1.22□□□□□ -2.21
ATP2B3Q16720 RNU6-412P-201ENST00000516434 106 ntBASIC1.22□□□□□ -2.21
ATP2B3Q16720 AC133485.1-201ENST00000567176 124 ntBASIC1.22□□□□□ -2.21
ATP2B3Q16720 MIR3613-201ENST00000579844 87 ntBASIC1.22□□□□□ -2.21
ATP2B3Q16720 MIR4676-201ENST00000583078 72 ntBASIC1.22□□□□□ -2.21
ATP2B3Q16720 MIR100-201ENST00000385259 80 ntBASIC1.21□□□□□ -2.22
ATP2B3Q16720 Y_RNA.49-201ENST00000362714 112 ntBASIC1.2□□□□□ -2.22
ATP2B3Q16720 Y_RNA.163-201ENST00000363702 113 ntBASIC1.2□□□□□ -2.22
ATP2B3Q16720 RNU6-865P-201ENST00000364772 107 ntBASIC1.2□□□□□ -2.22
ATP2B3Q16720 Y_RNA.323-201ENST00000365157 109 ntBASIC1.2□□□□□ -2.22
ATP2B3Q16720 Y_RNA.328-201ENST00000365208 113 ntBASIC1.2□□□□□ -2.22
ATP2B3Q16720 RNU6-1335P-201ENST00000365426 107 ntBASIC1.2□□□□□ -2.22
ATP2B3Q16720 MIR520E-201ENST00000384867 87 ntBASIC1.2□□□□□ -2.22
ATP2B3Q16720 MIR577-201ENST00000385196 96 ntBASIC1.2□□□□□ -2.22
ATP2B3Q16720 SNORD89-201ENST00000390981 114 ntBASIC1.2□□□□□ -2.22
ATP2B3Q16720 MIR1912-201ENST00000410389 80 ntBASIC1.2□□□□□ -2.22
ATP2B3Q16720 RNU4-83P-201ENST00000410863 133 ntBASIC1.2□□□□□ -2.22
ATP2B3Q16720 PDCD5P2-201ENST00000507570 312 ntBASIC1.2□□□□□ -2.22
ATP2B3Q16720 AC141557.1-201ENST00000540982 400 ntBASIC1.2□□□□□ -2.22
ATP2B3Q16720 AC103810.9-201ENST00000606688 112 ntBASIC1.2□□□□□ -2.22
ATP2B3Q16720 AL512310.12-203ENST00000640543 90 ntBASIC1.2□□□□□ -2.22
ATP2B3Q16720 Y_RNA.81-201ENST00000362997 102 ntBASIC1.19□□□□□ -2.22
ATP2B3Q16720 RNU6-1187P-201ENST00000364771 110 ntBASIC1.19□□□□□ -2.22
ATP2B3Q16720 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
ATP2B3Q16720 RNU6-531P-201ENST00000516694 104 ntBASIC1.19□□□□□ -2.22
ATP2B3Q16720 AC008608.1-201ENST00000603910 127 ntBASIC1.19□□□□□ -2.22
ATP2B3Q16720 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.19□□□□□ -2.22
ATP2B3Q16720 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
ATP2B3Q16720 Y_RNA.13-201ENST00000362403 112 ntBASIC1.18□□□□□ -2.22
ATP2B3Q16720 MIR200A-201ENST00000384875 90 ntBASIC1.18□□□□□ -2.22
ATP2B3Q16720 MIR125B2-201ENST00000385128 89 ntBASIC1.18□□□□□ -2.22
ATP2B3Q16720 MIR942-201ENST00000401111 86 ntBASIC1.18□□□□□ -2.22
ATP2B3Q16720 RNU6-977P-201ENST00000516411 103 ntBASIC1.18□□□□□ -2.22
ATP2B3Q16720 AC090897.1-201ENST00000580909 226 ntBASIC1.18□□□□□ -2.22
ATP2B3Q16720 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
ATP2B3Q16720 MIR373-201ENST00000362273 69 ntBASIC1.17□□□□□ -2.22
ATP2B3Q16720 Y_RNA.119-201ENST00000363301 96 ntBASIC1.17□□□□□ -2.22
ATP2B3Q16720 RNU6-1201P-201ENST00000384227 107 ntBASIC1.17□□□□□ -2.22
ATP2B3Q16720 MIR520F-201ENST00000384824 87 ntBASIC1.17□□□□□ -2.22
ATP2B3Q16720 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.17□□□□□ -2.22
ATP2B3Q16720 RNU6-1006P-201ENST00000516998 103 ntBASIC1.17□□□□□ -2.22
ATP2B3Q16720 RNU7-156P-201ENST00000517214 74 ntBASIC1.17□□□□□ -2.22
ATP2B3Q16720 DEFB131E-201ENST00000532329 154 ntBASIC1.17□□□□□ -2.22
ATP2B3Q16720 MIR4804-201ENST00000581683 73 ntBASIC1.17□□□□□ -2.22
ATP2B3Q16720 MIR8066-201ENST00000617280 78 ntBASIC1.17□□□□□ -2.22
ATP2B3Q16720 MIR1-1-201ENST00000362147 71 ntBASIC1.16□□□□□ -2.22
ATP2B3Q16720 RNU6-1313P-201ENST00000362622 102 ntBASIC1.16□□□□□ -2.22
ATP2B3Q16720 MIR532-201ENST00000385025 91 ntBASIC1.16□□□□□ -2.22
ATP2B3Q16720 MIR1827-201ENST00000408549 66 ntBASIC1.16□□□□□ -2.22
ATP2B3Q16720 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.16□□□□□ -2.22
ATP2B3Q16720 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.16□□□□□ -2.22
ATP2B3Q16720 MIR4500-201ENST00000579472 76 ntBASIC1.16□□□□□ -2.22
ATP2B3Q16720 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.16□□□□□ -2.22
ATP2B3Q16720 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
ATP2B3Q16720 RNU6-755P-201ENST00000364400 103 ntBASIC1.15□□□□□ -2.23
ATP2B3Q16720 RNY1P2-201ENST00000364820 117 ntBASIC1.15□□□□□ -2.23
ATP2B3Q16720 MIR590-201ENST00000385008 97 ntBASIC1.15□□□□□ -2.23
ATP2B3Q16720 BX276092.1-201ENST00000427368 251 ntBASIC1.15□□□□□ -2.23
ATP2B3Q16720 AC067940.1-201ENST00000458411 300 ntBASIC1.15□□□□□ -2.23
ATP2B3Q16720 RNU7-102P-201ENST00000458948 62 ntBASIC1.15□□□□□ -2.23
ATP2B3Q16720 RPS29P1-201ENST00000465274 159 ntBASIC1.15□□□□□ -2.23
ATP2B3Q16720 RNU6-109P-201ENST00000516364 107 ntBASIC1.15□□□□□ -2.23
ATP2B3Q16720 RNU6-184P-201ENST00000516514 107 ntBASIC1.15□□□□□ -2.23
ATP2B3Q16720 MIR548Z-201ENST00000584743 97 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms