Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC011603.4-201ENST00000611325 277 ntBASIC-0.14□□□□□ -2.43
RAB40BQ12829 RNU6-161P-201ENST00000363051 106 ntBASIC-0.15□□□□□ -2.43
RAB40BQ12829 RNY1P2-201ENST00000364820 117 ntBASIC-0.15□□□□□ -2.43
RAB40BQ12829 RNU6-818P-201ENST00000364837 108 ntBASIC-0.15□□□□□ -2.43
RAB40BQ12829 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.15□□□□□ -2.43
RAB40BQ12829 SNORD58.1-201ENST00000391313 66 ntBASIC-0.15□□□□□ -2.43
RAB40BQ12829 MTATP6P21-201ENST00000440681 189 ntBASIC-0.15□□□□□ -2.43
RAB40BQ12829 RNU6-782P-201ENST00000516852 104 ntBASIC-0.15□□□□□ -2.43
RAB40BQ12829 RNU7-161P-201ENST00000517289 62 ntBASIC-0.15□□□□□ -2.43
RAB40BQ12829 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
RAB40BQ12829 MIR4743-201ENST00000584576 69 ntBASIC-0.15□□□□□ -2.43
RAB40BQ12829 AL162376.1-201ENST00000624117 175 ntBASIC-0.15□□□□□ -2.43
RAB40BQ12829 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.16□□□□□ -2.44
RAB40BQ12829 RNU6-302P-201ENST00000365249 107 ntBASIC-0.16□□□□□ -2.44
RAB40BQ12829 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.16□□□□□ -2.44
RAB40BQ12829 RNU6-738P-201ENST00000384531 106 ntBASIC-0.16□□□□□ -2.44
RAB40BQ12829 RNU6-429P-201ENST00000384582 108 ntBASIC-0.16□□□□□ -2.44
RAB40BQ12829 MIR1302-3-201ENST00000408128 138 ntBASIC-0.16□□□□□ -2.44
RAB40BQ12829 AC108059.2-201ENST00000434626 151 ntBASIC-0.16□□□□□ -2.44
RAB40BQ12829 RNU6-240P-201ENST00000516098 97 ntBASIC-0.16□□□□□ -2.44
RAB40BQ12829 RNU4-71P-201ENST00000516258 113 ntBASIC-0.16□□□□□ -2.44
RAB40BQ12829 AC138907.4-201ENST00000570107 226 ntBASIC-0.16□□□□□ -2.44
RAB40BQ12829 AC021443.1-201ENST00000604478 211 ntBASIC-0.16□□□□□ -2.44
RAB40BQ12829 RNU7-10P-201ENST00000607194 63 ntBASIC-0.16□□□□□ -2.44
RAB40BQ12829 AC067863.3-201ENST00000624172 122 ntBASIC-0.16□□□□□ -2.44
RAB40BQ12829 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.17□□□□□ -2.44
RAB40BQ12829 RNU6-652P-201ENST00000365488 107 ntBASIC-0.17□□□□□ -2.44
RAB40BQ12829 AC107027.2-201ENST00000512197 115 ntBASIC-0.17□□□□□ -2.44
RAB40BQ12829 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.17□□□□□ -2.44
RAB40BQ12829 RNA5SP257-201ENST00000363023 116 ntBASIC-0.18□□□□□ -2.44
RAB40BQ12829 MIR501-201ENST00000390204 84 ntBASIC-0.18□□□□□ -2.44
RAB40BQ12829 SNORA75.5-201ENST00000391291 81 ntBASIC-0.18□□□□□ -2.44
RAB40BQ12829 MTCYBP9-201ENST00000431021 303 ntBASIC-0.18□□□□□ -2.44
RAB40BQ12829 RNU7-164P-201ENST00000459221 62 ntBASIC-0.18□□□□□ -2.44
RAB40BQ12829 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.18□□□□□ -2.44
RAB40BQ12829 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.18□□□□□ -2.44
RAB40BQ12829 U7.6-201ENST00000610841 64 ntBASIC-0.18□□□□□ -2.44
RAB40BQ12829 SNORA70.25-201ENST00000612741 95 ntBASIC-0.18□□□□□ -2.44
RAB40BQ12829 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.18□□□□□ -2.44
RAB40BQ12829 RNU6-918P-201ENST00000391219 106 ntBASIC-0.19□□□□□ -2.44
RAB40BQ12829 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.19□□□□□ -2.44
RAB40BQ12829 MIR5706-201ENST00000579841 80 ntBASIC-0.19□□□□□ -2.44
RAB40BQ12829 MIR3128-201ENST00000581957 66 ntBASIC-0.19□□□□□ -2.44
RAB40BQ12829 RNA5SP403-201ENST00000363598 108 ntBASIC-0.2□□□□□ -2.44
RAB40BQ12829 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.2□□□□□ -2.44
RAB40BQ12829 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.2□□□□□ -2.44
RAB40BQ12829 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.2□□□□□ -2.44
RAB40BQ12829 MIR635-201ENST00000384830 98 ntBASIC-0.2□□□□□ -2.44
RAB40BQ12829 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.2□□□□□ -2.44
RAB40BQ12829 RNU4-69P-201ENST00000410677 143 ntBASIC-0.2□□□□□ -2.44
RAB40BQ12829 RNU7-165P-201ENST00000458864 60 ntBASIC-0.2□□□□□ -2.44
RAB40BQ12829 RNU7-159P-201ENST00000459284 62 ntBASIC-0.2□□□□□ -2.44
RAB40BQ12829 MIR1270-201ENST00000459320 83 ntBASIC-0.2□□□□□ -2.44
RAB40BQ12829 RNU7-123P-201ENST00000515911 60 ntBASIC-0.2□□□□□ -2.44
RAB40BQ12829 MIR4500-201ENST00000579472 76 ntBASIC-0.2□□□□□ -2.44
RAB40BQ12829 MIR3149-201ENST00000584629 83 ntBASIC-0.2□□□□□ -2.44
RAB40BQ12829 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.2□□□□□ -2.44
RAB40BQ12829 MIR1295B-201ENST00000636144 60 ntBASIC-0.2□□□□□ -2.44
RAB40BQ12829 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.21□□□□□ -2.44
RAB40BQ12829 RNU6V-201ENST00000384105 107 ntBASIC-0.21□□□□□ -2.44
RAB40BQ12829 RNU6-929P-201ENST00000384429 107 ntBASIC-0.21□□□□□ -2.44
RAB40BQ12829 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.21□□□□□ -2.44
RAB40BQ12829 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.21□□□□□ -2.44
RAB40BQ12829 MIR548AD-201ENST00000584780 82 ntBASIC-0.21□□□□□ -2.44
RAB40BQ12829 MIR6844-201ENST00000637122 62 ntBASIC-0.21□□□□□ -2.44
RAB40BQ12829 AC073869.9-201ENST00000641610 120 ntBASIC-0.21□□□□□ -2.44
RAB40BQ12829 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.22□□□□□ -2.44
RAB40BQ12829 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.22□□□□□ -2.44
RAB40BQ12829 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.22□□□□□ -2.44
RAB40BQ12829 MIR206-201ENST00000384872 86 ntBASIC-0.22□□□□□ -2.44
RAB40BQ12829 MIR599-201ENST00000385069 95 ntBASIC-0.22□□□□□ -2.44
RAB40BQ12829 SNORD77B-201ENST00000391112 67 ntBASIC-0.22□□□□□ -2.44
RAB40BQ12829 RNU7-48P-201ENST00000458875 63 ntBASIC-0.22□□□□□ -2.44
RAB40BQ12829 AC062037.2-201ENST00000610137 73 ntBASIC-0.22□□□□□ -2.44
RAB40BQ12829 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.23□□□□□ -2.45
RAB40BQ12829 RNU6-312P-201ENST00000364629 107 ntBASIC-0.23□□□□□ -2.45
RAB40BQ12829 SNORA20.1-201ENST00000364790 130 ntBASIC-0.23□□□□□ -2.45
RAB40BQ12829 RNU6-449P-201ENST00000383914 107 ntBASIC-0.23□□□□□ -2.45
RAB40BQ12829 SNORD41.1-201ENST00000391000 69 ntBASIC-0.23□□□□□ -2.45
RAB40BQ12829 RNU6-269P-201ENST00000391077 97 ntBASIC-0.23□□□□□ -2.45
RAB40BQ12829 RNU6-588P-201ENST00000410281 105 ntBASIC-0.23□□□□□ -2.45
RAB40BQ12829 AC097635.1-201ENST00000450678 155 ntBASIC-0.23□□□□□ -2.45
RAB40BQ12829 TRAJ51-201ENST00000504127 63 ntBASIC-0.23□□□□□ -2.45
RAB40BQ12829 RNU6-111P-201ENST00000517179 105 ntBASIC-0.23□□□□□ -2.45
RAB40BQ12829 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.24□□□□□ -2.45
RAB40BQ12829 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.24□□□□□ -2.45
RAB40BQ12829 SNORD18B-201ENST00000365659 72 ntBASIC-0.24□□□□□ -2.45
RAB40BQ12829 RNU6-47P-201ENST00000383866 107 ntBASIC-0.24□□□□□ -2.45
RAB40BQ12829 MIR329-2-201ENST00000385029 84 ntBASIC-0.24□□□□□ -2.45
RAB40BQ12829 MIR568-201ENST00000385036 95 ntBASIC-0.24□□□□□ -2.45
RAB40BQ12829 RNA5SP163-201ENST00000410304 99 ntBASIC-0.24□□□□□ -2.45
RAB40BQ12829 SNORD4A-201ENST00000459174 72 ntBASIC-0.24□□□□□ -2.45
RAB40BQ12829 AC104692.1-201ENST00000472406 90 ntBASIC-0.24□□□□□ -2.45
RAB40BQ12829 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.24□□□□□ -2.45
RAB40BQ12829 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.24□□□□□ -2.45
RAB40BQ12829 RNU2-60P-201ENST00000517290 128 ntBASIC-0.24□□□□□ -2.45
RAB40BQ12829 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.25□□□□□ -2.45
RAB40BQ12829 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.25□□□□□ -2.45
RAB40BQ12829 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.25□□□□□ -2.45
RAB40BQ12829 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 353.3 ms