Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 RNU6-1194P-201ENST00000516208 104 ntBASIC0.42□□□□□ -2.34
SRPXP78539 Y_RNA.676-201ENST00000516393 96 ntBASIC0.42□□□□□ -2.34
SRPXP78539 AC018659.1-201ENST00000551083 169 ntBASIC0.42□□□□□ -2.34
SRPXP78539 U7.2-201ENST00000607576 63 ntBASIC0.42□□□□□ -2.34
SRPXP78539 MIR6788-201ENST00000618842 66 ntBASIC0.42□□□□□ -2.34
SRPXP78539 AC092634.7-201ENST00000621022 103 ntBASIC0.42□□□□□ -2.34
SRPXP78539 RNU6-235P-201ENST00000362644 107 ntBASIC0.41□□□□□ -2.34
SRPXP78539 RNU4-58P-201ENST00000363192 141 ntBASIC0.41□□□□□ -2.34
SRPXP78539 SNORA36.1-201ENST00000363424 132 ntBASIC0.41□□□□□ -2.34
SRPXP78539 SNORA63.5-201ENST00000363548 123 ntBASIC0.41□□□□□ -2.34
SRPXP78539 RNA5SP245-201ENST00000364239 121 ntBASIC0.41□□□□□ -2.34
SRPXP78539 RNU6-209P-201ENST00000384118 107 ntBASIC0.41□□□□□ -2.34
SRPXP78539 Y_RNA.506-201ENST00000384494 102 ntBASIC0.41□□□□□ -2.34
SRPXP78539 Y_RNA.567-201ENST00000384736 106 ntBASIC0.41□□□□□ -2.34
SRPXP78539 MT-TR-201ENST00000387439 65 ntBASIC0.41□□□□□ -2.34
SRPXP78539 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.41□□□□□ -2.34
SRPXP78539 RPS29P1-201ENST00000465274 159 ntBASIC0.41□□□□□ -2.34
SRPXP78539 RNU6-781P-201ENST00000516377 101 ntBASIC0.41□□□□□ -2.34
SRPXP78539 SNORA25.18-201ENST00000607153 114 ntBASIC0.41□□□□□ -2.34
SRPXP78539 RNY1P2-201ENST00000364820 117 ntBASIC0.4□□□□□ -2.35
SRPXP78539 SNORD77B-201ENST00000391112 67 ntBASIC0.4□□□□□ -2.35
SRPXP78539 MIR548I1-201ENST00000408810 149 ntBASIC0.4□□□□□ -2.35
SRPXP78539 RNU6-735P-201ENST00000410612 107 ntBASIC0.4□□□□□ -2.35
SRPXP78539 MTND4LP9-201ENST00000427694 174 ntBASIC0.4□□□□□ -2.35
SRPXP78539 AL158147.1-201ENST00000443970 75 ntBASIC0.4□□□□□ -2.35
SRPXP78539 RNU7-6P-201ENST00000516845 62 ntBASIC0.4□□□□□ -2.35
SRPXP78539 MIR151B-201ENST00000584249 96 ntBASIC0.4□□□□□ -2.35
SRPXP78539 RNU6-647P-201ENST00000364243 107 ntBASIC0.39□□□□□ -2.35
SRPXP78539 MIR548J-201ENST00000408833 112 ntBASIC0.39□□□□□ -2.35
SRPXP78539 RNU6-469P-201ENST00000516253 101 ntBASIC0.39□□□□□ -2.35
SRPXP78539 RN7SKP12-201ENST00000516275 143 ntBASIC0.39□□□□□ -2.35
SRPXP78539 AC087741.2-201ENST00000619415 172 ntBASIC0.39□□□□□ -2.35
SRPXP78539 RNU6-257P-201ENST00000410238 98 ntBASIC0.38□□□□□ -2.35
SRPXP78539 RNU7-48P-201ENST00000458875 63 ntBASIC0.38□□□□□ -2.35
SRPXP78539 RNU7-2P-201ENST00000516096 62 ntBASIC0.38□□□□□ -2.35
SRPXP78539 Y_RNA.773-201ENST00000607168 90 ntBASIC0.38□□□□□ -2.35
SRPXP78539 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.38□□□□□ -2.35
SRPXP78539 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.38□□□□□ -2.35
SRPXP78539 MIR101-2-201ENST00000362195 79 ntBASIC0.37□□□□□ -2.35
SRPXP78539 Y_RNA.174-201ENST00000363781 105 ntBASIC0.37□□□□□ -2.35
SRPXP78539 Y_RNA.224-201ENST00000364308 111 ntBASIC0.37□□□□□ -2.35
SRPXP78539 SNORA8.2-201ENST00000384372 139 ntBASIC0.37□□□□□ -2.35
SRPXP78539 Y_RNA.568-201ENST00000384742 113 ntBASIC0.37□□□□□ -2.35
SRPXP78539 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.37□□□□□ -2.35
SRPXP78539 SUMO1P3-201ENST00000439961 304 ntBASIC0.37□□□□□ -2.35
SRPXP78539 MIR4714-201ENST00000580728 77 ntBASIC0.37□□□□□ -2.35
SRPXP78539 MIR1255B1-201ENST00000636325 63 ntBASIC0.37□□□□□ -2.35
SRPXP78539 MIR518A1-201ENST00000385068 85 ntBASIC0.36□□□□□ -2.35
SRPXP78539 SNORA40.8-201ENST00000411034 126 ntBASIC0.36□□□□□ -2.35
SRPXP78539 RNU6-1223P-201ENST00000517124 104 ntBASIC0.36□□□□□ -2.35
SRPXP78539 MIR5000-201ENST00000577717 103 ntBASIC0.36□□□□□ -2.35
SRPXP78539 MIR4500-201ENST00000579472 76 ntBASIC0.36□□□□□ -2.35
SRPXP78539 MIR103A1-201ENST00000362165 78 ntBASIC0.35□□□□□ -2.35
SRPXP78539 MIRLET7D-201ENST00000362263 87 ntBASIC0.35□□□□□ -2.35
SRPXP78539 Y_RNA.226-201ENST00000364337 114 ntBASIC0.35□□□□□ -2.35
SRPXP78539 SNORD115-35-201ENST00000365122 82 ntBASIC0.35□□□□□ -2.35
SRPXP78539 Y_RNA.343-201ENST00000365354 112 ntBASIC0.35□□□□□ -2.35
SRPXP78539 RNY1P5-201ENST00000383890 115 ntBASIC0.35□□□□□ -2.35
SRPXP78539 Y_RNA.528-201ENST00000384575 108 ntBASIC0.35□□□□□ -2.35
SRPXP78539 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
SRPXP78539 RNU6-1061P-201ENST00000516530 99 ntBASIC0.35□□□□□ -2.35
SRPXP78539 RNU6-1234P-201ENST00000516877 103 ntBASIC0.35□□□□□ -2.35
SRPXP78539 MIR3163-201ENST00000581592 73 ntBASIC0.35□□□□□ -2.35
SRPXP78539 AL078603.1-201ENST00000603824 313 ntBASIC0.35□□□□□ -2.35
SRPXP78539 MIR376B-201ENST00000614515 100 ntBASIC0.35□□□□□ -2.35
SRPXP78539 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.35□□□□□ -2.35
SRPXP78539 RNA5SP347-201ENST00000362445 119 ntBASIC0.34□□□□□ -2.36
SRPXP78539 RNU6-774P-201ENST00000363238 107 ntBASIC0.34□□□□□ -2.36
SRPXP78539 SNORD118-201ENST00000363593 134 ntBASIC0.34□□□□□ -2.36
SRPXP78539 Y_RNA.198-201ENST00000364013 98 ntBASIC0.34□□□□□ -2.36
SRPXP78539 Y_RNA.213-201ENST00000364178 111 ntBASIC0.34□□□□□ -2.36
SRPXP78539 Y_RNA.328-201ENST00000365208 113 ntBASIC0.34□□□□□ -2.36
SRPXP78539 RNU6-429P-201ENST00000384582 108 ntBASIC0.34□□□□□ -2.36
SRPXP78539 SNORD28-201ENST00000384706 75 ntBASIC0.34□□□□□ -2.36
SRPXP78539 MIRLET7F2-201ENST00000385277 83 ntBASIC0.34□□□□□ -2.36
SRPXP78539 SNORA40-201ENST00000388090 126 ntBASIC0.34□□□□□ -2.36
SRPXP78539 MIR1287-201ENST00000408492 90 ntBASIC0.34□□□□□ -2.36
SRPXP78539 RNA5SP136-201ENST00000410906 107 ntBASIC0.34□□□□□ -2.36
SRPXP78539 SNORD71-201ENST00000411292 86 ntBASIC0.34□□□□□ -2.36
SRPXP78539 BX276092.1-201ENST00000427368 251 ntBASIC0.34□□□□□ -2.36
SRPXP78539 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.34□□□□□ -2.36
SRPXP78539 RNA5SP268-201ENST00000516828 124 ntBASIC0.34□□□□□ -2.36
SRPXP78539 RNA5SP47-201ENST00000517230 109 ntBASIC0.34□□□□□ -2.36
SRPXP78539 TUG1_4.1-201ENST00000619464 181 ntBASIC0.34□□□□□ -2.36
SRPXP78539 AP001362.1-201ENST00000625165 124 ntBASIC0.34□□□□□ -2.36
SRPXP78539 Y_RNA.98-201ENST00000363109 102 ntBASIC0.33□□□□□ -2.36
SRPXP78539 Y_RNA.127-201ENST00000363386 109 ntBASIC0.33□□□□□ -2.36
SRPXP78539 RNU6-865P-201ENST00000364772 107 ntBASIC0.33□□□□□ -2.36
SRPXP78539 SNORD58C-201ENST00000365223 64 ntBASIC0.33□□□□□ -2.36
SRPXP78539 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
SRPXP78539 Y_RNA.525-201ENST00000384570 113 ntBASIC0.33□□□□□ -2.36
SRPXP78539 MIR34C-201ENST00000384831 77 ntBASIC0.33□□□□□ -2.36
SRPXP78539 Y_RNA.630-201ENST00000411370 108 ntBASIC0.33□□□□□ -2.36
SRPXP78539 AC098934.3-201ENST00000430450 190 ntBASIC0.33□□□□□ -2.36
SRPXP78539 AC092628.1-201ENST00000436250 252 ntBASIC0.33□□□□□ -2.36
SRPXP78539 RNU6-1211P-201ENST00000459179 105 ntBASIC0.33□□□□□ -2.36
SRPXP78539 RNU6-521P-201ENST00000516663 105 ntBASIC0.33□□□□□ -2.36
SRPXP78539 MIR7107-201ENST00000611489 80 ntBASIC0.33□□□□□ -2.36
SRPXP78539 AC244669.1-204ENST00000621564 178 ntBASIC0.33□□□□□ -2.36
SRPXP78539 Y_RNA.49-201ENST00000362714 112 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 254.8 ms