Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.27□□□□□ -2.45
IRX3P78415 RNU7-137P-201ENST00000516788 62 ntBASIC-0.27□□□□□ -2.45
IRX3P78415 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.27□□□□□ -2.45
IRX3P78415 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.28□□□□□ -2.45
IRX3P78415 RNU6-867P-201ENST00000364956 107 ntBASIC-0.28□□□□□ -2.45
IRX3P78415 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.28□□□□□ -2.45
IRX3P78415 SNORA75.1-201ENST00000391130 148 ntBASIC-0.28□□□□□ -2.45
IRX3P78415 RNU6-320P-201ENST00000516511 106 ntBASIC-0.28□□□□□ -2.45
IRX3P78415 RNU6-635P-201ENST00000516651 102 ntBASIC-0.28□□□□□ -2.45
IRX3P78415 U4.1-201ENST00000620349 87 ntBASIC-0.28□□□□□ -2.45
IRX3P78415 RNU6-509P-201ENST00000363519 107 ntBASIC-0.29□□□□□ -2.46
IRX3P78415 RNA5SP403-201ENST00000363598 108 ntBASIC-0.29□□□□□ -2.46
IRX3P78415 RNU6-275P-201ENST00000364910 107 ntBASIC-0.29□□□□□ -2.46
IRX3P78415 RNU6-449P-201ENST00000383914 107 ntBASIC-0.29□□□□□ -2.46
IRX3P78415 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.29□□□□□ -2.46
IRX3P78415 MIR635-201ENST00000384830 98 ntBASIC-0.29□□□□□ -2.46
IRX3P78415 AC244250.2-201ENST00000418731 148 ntBASIC-0.29□□□□□ -2.46
IRX3P78415 AC096531.1-201ENST00000419107 107 ntBASIC-0.29□□□□□ -2.46
IRX3P78415 RNU7-74P-201ENST00000459104 62 ntBASIC-0.29□□□□□ -2.46
IRX3P78415 SNORD4A-201ENST00000459174 72 ntBASIC-0.29□□□□□ -2.46
IRX3P78415 RNU6-180P-201ENST00000516697 61 ntBASIC-0.29□□□□□ -2.46
IRX3P78415 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.29□□□□□ -2.46
IRX3P78415 RNU6-797P-201ENST00000363101 109 ntBASIC-0.3□□□□□ -2.46
IRX3P78415 SNORA63.5-201ENST00000363548 123 ntBASIC-0.3□□□□□ -2.46
IRX3P78415 RNA5SP275-201ENST00000363936 118 ntBASIC-0.3□□□□□ -2.46
IRX3P78415 RNY4P28-201ENST00000365281 93 ntBASIC-0.3□□□□□ -2.46
IRX3P78415 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.3□□□□□ -2.46
IRX3P78415 MIR548I2-201ENST00000408348 149 ntBASIC-0.3□□□□□ -2.46
IRX3P78415 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.3□□□□□ -2.46
IRX3P78415 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.3□□□□□ -2.46
IRX3P78415 RNU2-60P-201ENST00000517290 128 ntBASIC-0.3□□□□□ -2.46
IRX3P78415 MIR6507-201ENST00000613630 70 ntBASIC-0.3□□□□□ -2.46
IRX3P78415 MIR6514-201ENST00000622549 70 ntBASIC-0.3□□□□□ -2.46
IRX3P78415 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.31□□□□□ -2.46
IRX3P78415 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.31□□□□□ -2.46
IRX3P78415 RNA5SP205-201ENST00000364653 136 ntBASIC-0.31□□□□□ -2.46
IRX3P78415 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.31□□□□□ -2.46
IRX3P78415 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.31□□□□□ -2.46
IRX3P78415 MT-TW-201ENST00000387382 68 ntBASIC-0.31□□□□□ -2.46
IRX3P78415 SNORD67.1-201ENST00000516618 108 ntBASIC-0.31□□□□□ -2.46
IRX3P78415 RNU7-161P-201ENST00000517289 62 ntBASIC-0.31□□□□□ -2.46
IRX3P78415 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.31□□□□□ -2.46
IRX3P78415 uc_338.28-201ENST00000612082 187 ntBASIC-0.31□□□□□ -2.46
IRX3P78415 RNU6-690P-201ENST00000365242 106 ntBASIC-0.32□□□□□ -2.46
IRX3P78415 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.32□□□□□ -2.46
IRX3P78415 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.32□□□□□ -2.46
IRX3P78415 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.32□□□□□ -2.46
IRX3P78415 MIR519A1-201ENST00000385257 85 ntBASIC-0.32□□□□□ -2.46
IRX3P78415 SNORD75.1-201ENST00000408373 60 ntBASIC-0.32□□□□□ -2.46
IRX3P78415 RPS29P8-201ENST00000445109 171 ntBASIC-0.32□□□□□ -2.46
IRX3P78415 AC097635.1-201ENST00000450678 155 ntBASIC-0.32□□□□□ -2.46
IRX3P78415 AC114755.3-201ENST00000481111 251 ntBASIC-0.32□□□□□ -2.46
IRX3P78415 RNA5SP236-201ENST00000516169 116 ntBASIC-0.32□□□□□ -2.46
IRX3P78415 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.32□□□□□ -2.46
IRX3P78415 MIR4677-201ENST00000584153 80 ntBASIC-0.32□□□□□ -2.46
IRX3P78415 AC006504.6-201ENST00000590142 199 ntBASIC-0.32□□□□□ -2.46
IRX3P78415 AL590491.3-201ENST00000610731 82 ntBASIC-0.32□□□□□ -2.46
IRX3P78415 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.32□□□□□ -2.46
IRX3P78415 RN7SL660P-201ENST00000614852 299 ntBASIC-0.32□□□□□ -2.46
IRX3P78415 MIR4788-201ENST00000639104 80 ntBASIC-0.32□□□□□ -2.46
IRX3P78415 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.33□□□□□ -2.46
IRX3P78415 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.33□□□□□ -2.46
IRX3P78415 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.33□□□□□ -2.46
IRX3P78415 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.33□□□□□ -2.46
IRX3P78415 RNA5SP300-201ENST00000391197 107 ntBASIC-0.33□□□□□ -2.46
IRX3P78415 SNORD58.1-201ENST00000391313 66 ntBASIC-0.33□□□□□ -2.46
IRX3P78415 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.33□□□□□ -2.46
IRX3P78415 HMGN2P22-201ENST00000427588 175 ntBASIC-0.33□□□□□ -2.46
IRX3P78415 RNU7-104P-201ENST00000459398 79 ntBASIC-0.33□□□□□ -2.46
IRX3P78415 SNORD126-201ENST00000459475 77 ntBASIC-0.33□□□□□ -2.46
IRX3P78415 CR383656.4-201ENST00000546909 122 ntBASIC-0.33□□□□□ -2.46
IRX3P78415 MIR4645-201ENST00000583158 77 ntBASIC-0.33□□□□□ -2.46
IRX3P78415 AP001180.6-201ENST00000584918 159 ntBASIC-0.33□□□□□ -2.46
IRX3P78415 RNU2-4P-201ENST00000606190 192 ntBASIC-0.33□□□□□ -2.46
IRX3P78415 MIR548AZ-201ENST00000616567 95 ntBASIC-0.33□□□□□ -2.46
IRX3P78415 MIR148A-201ENST00000362215 68 ntBASIC-0.34□□□□□ -2.46
IRX3P78415 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.34□□□□□ -2.46
IRX3P78415 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.34□□□□□ -2.46
IRX3P78415 RNA5SP98-201ENST00000363158 137 ntBASIC-0.34□□□□□ -2.46
IRX3P78415 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.34□□□□□ -2.46
IRX3P78415 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.34□□□□□ -2.46
IRX3P78415 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.34□□□□□ -2.46
IRX3P78415 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.34□□□□□ -2.46
IRX3P78415 SNORA32-201ENST00000384072 121 ntBASIC-0.34□□□□□ -2.46
IRX3P78415 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.34□□□□□ -2.46
IRX3P78415 RNU4-69P-201ENST00000410677 143 ntBASIC-0.34□□□□□ -2.46
IRX3P78415 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
IRX3P78415 MIR4643-201ENST00000577473 78 ntBASIC-0.34□□□□□ -2.46
IRX3P78415 MIR548AE2-201ENST00000583456 67 ntBASIC-0.34□□□□□ -2.46
IRX3P78415 AC105081.1-201ENST00000617727 106 ntBASIC-0.34□□□□□ -2.46
IRX3P78415 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.35□□□□□ -2.46
IRX3P78415 RNU6-238P-201ENST00000363313 106 ntBASIC-0.35□□□□□ -2.47
IRX3P78415 U8.6-201ENST00000364939 135 ntBASIC-0.35□□□□□ -2.47
IRX3P78415 SNORD49B-201ENST00000365172 72 ntBASIC-0.35□□□□□ -2.47
IRX3P78415 RNU6-811P-201ENST00000384069 107 ntBASIC-0.35□□□□□ -2.47
IRX3P78415 RNU6-472P-201ENST00000384299 107 ntBASIC-0.35□□□□□ -2.47
IRX3P78415 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.35□□□□□ -2.47
IRX3P78415 SNORD77B-201ENST00000391112 67 ntBASIC-0.35□□□□□ -2.47
IRX3P78415 AC109327.2-201ENST00000448339 378 ntBASIC-0.35□□□□□ -2.47
IRX3P78415 MIR4493-201ENST00000584016 73 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 231.6 ms