Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.93□□□□□ -2.56
ACTBP60709 AC098614.3-201ENST00000438957 440 ntBASIC-0.93□□□□□ -2.56
ACTBP60709 AL445193.1-201ENST00000441183 141 ntBASIC-0.93□□□□□ -2.56
ACTBP60709 MIR1270-201ENST00000459320 83 ntBASIC-0.93□□□□□ -2.56
ACTBP60709 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.93□□□□□ -2.56
ACTBP60709 MIR548AG2-201ENST00000581228 64 ntBASIC-0.93□□□□□ -2.56
ACTBP60709 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.93□□□□□ -2.56
ACTBP60709 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.94□□□□□ -2.56
ACTBP60709 RNU6-728P-201ENST00000365375 104 ntBASIC-0.94□□□□□ -2.56
ACTBP60709 MIR519E-201ENST00000385075 84 ntBASIC-0.94□□□□□ -2.56
ACTBP60709 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.94□□□□□ -2.56
ACTBP60709 RNU6-381P-201ENST00000391259 108 ntBASIC-0.94□□□□□ -2.56
ACTBP60709 SNORD2.1-201ENST00000458762 69 ntBASIC-0.94□□□□□ -2.56
ACTBP60709 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.94□□□□□ -2.56
ACTBP60709 RNU6-881P-201ENST00000516813 102 ntBASIC-0.94□□□□□ -2.56
ACTBP60709 RNU6-86P-201ENST00000606534 107 ntBASIC-0.94□□□□□ -2.56
ACTBP60709 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.95□□□□□ -2.56
ACTBP60709 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.95□□□□□ -2.56
ACTBP60709 MIR617-201ENST00000385030 97 ntBASIC-0.95□□□□□ -2.56
ACTBP60709 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.95□□□□□ -2.56
ACTBP60709 MIR1252-201ENST00000408861 65 ntBASIC-0.95□□□□□ -2.56
ACTBP60709 RNA5SP266-201ENST00000410273 108 ntBASIC-0.95□□□□□ -2.56
ACTBP60709 RNU7-195P-201ENST00000458793 62 ntBASIC-0.95□□□□□ -2.56
ACTBP60709 SNORD116-25-201ENST00000516517 92 ntBASIC-0.95□□□□□ -2.56
ACTBP60709 SNORD38.3-201ENST00000516599 73 ntBASIC-0.95□□□□□ -2.56
ACTBP60709 RNY1P9-201ENST00000532431 109 ntBASIC-0.95□□□□□ -2.56
ACTBP60709 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.95□□□□□ -2.56
ACTBP60709 MIR4500-201ENST00000579472 76 ntBASIC-0.95□□□□□ -2.56
ACTBP60709 YWHAEP2-201ENST00000580066 112 ntBASIC-0.95□□□□□ -2.56
ACTBP60709 MIR6851-201ENST00000617060 67 ntBASIC-0.95□□□□□ -2.56
ACTBP60709 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.96□□□□□ -2.56
ACTBP60709 RNU6-900P-201ENST00000384498 102 ntBASIC-0.96□□□□□ -2.56
ACTBP60709 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.96□□□□□ -2.56
ACTBP60709 MIR196A1-201ENST00000388006 70 ntBASIC-0.96□□□□□ -2.56
ACTBP60709 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.96□□□□□ -2.56
ACTBP60709 RNU6-721P-201ENST00000410155 105 ntBASIC-0.96□□□□□ -2.56
ACTBP60709 SNORD63B-201ENST00000411005 70 ntBASIC-0.96□□□□□ -2.56
ACTBP60709 SNORD57-201ENST00000448188 72 ntBASIC-0.96□□□□□ -2.56
ACTBP60709 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.96□□□□□ -2.56
ACTBP60709 FGF7P4-201ENST00000509595 295 ntBASIC-0.96□□□□□ -2.56
ACTBP60709 SERF1AP1-201ENST00000514575 187 ntBASIC-0.96□□□□□ -2.56
ACTBP60709 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.96□□□□□ -2.56
ACTBP60709 U4.1-201ENST00000620349 87 ntBASIC-0.96□□□□□ -2.56
ACTBP60709 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
ACTBP60709 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.97□□□□□ -2.56
ACTBP60709 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.97□□□□□ -2.56
ACTBP60709 RNY1P7-201ENST00000384743 110 ntBASIC-0.97□□□□□ -2.56
ACTBP60709 MIR204-201ENST00000385200 110 ntBASIC-0.97□□□□□ -2.56
ACTBP60709 RNU6-823P-201ENST00000391042 103 ntBASIC-0.97□□□□□ -2.56
ACTBP60709 RNU7-48P-201ENST00000458875 63 ntBASIC-0.97□□□□□ -2.56
ACTBP60709 AC145423.2-201ENST00000610631 239 ntBASIC-0.97□□□□□ -2.56
ACTBP60709 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.97□□□□□ -2.56
ACTBP60709 RNU6-170P-201ENST00000362832 104 ntBASIC-0.98□□□□□ -2.57
ACTBP60709 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.98□□□□□ -2.57
ACTBP60709 SNORD115-44-201ENST00000365391 82 ntBASIC-0.98□□□□□ -2.57
ACTBP60709 RNU6-524P-201ENST00000384270 107 ntBASIC-0.98□□□□□ -2.57
ACTBP60709 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.98□□□□□ -2.57
ACTBP60709 AC021146.6-201ENST00000514659 117 ntBASIC-0.98□□□□□ -2.57
ACTBP60709 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.99□□□□□ -2.57
ACTBP60709 RNU4-36P-201ENST00000364294 144 ntBASIC-0.99□□□□□ -2.57
ACTBP60709 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.99□□□□□ -2.57
ACTBP60709 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.99□□□□□ -2.57
ACTBP60709 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.99□□□□□ -2.57
ACTBP60709 RNU6-154P-201ENST00000384306 106 ntBASIC-0.99□□□□□ -2.57
ACTBP60709 MIR206-201ENST00000384872 86 ntBASIC-0.99□□□□□ -2.57
ACTBP60709 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.99□□□□□ -2.57
ACTBP60709 AC138393.2-201ENST00000414742 246 ntBASIC-0.99□□□□□ -2.57
ACTBP60709 AL627230.5-201ENST00000619807 58 ntBASIC-0.99□□□□□ -2.57
ACTBP60709 Y_RNA.82-201ENST00000363000 102 ntBASIC-1□□□□□ -2.57
ACTBP60709 Y_RNA.92-201ENST00000363043 102 ntBASIC-1□□□□□ -2.57
ACTBP60709 Y_RNA.235-201ENST00000364412 102 ntBASIC-1□□□□□ -2.57
ACTBP60709 Y_RNA.306-201ENST00000365015 102 ntBASIC-1□□□□□ -2.57
ACTBP60709 Y_RNA.312-201ENST00000365089 102 ntBASIC-1□□□□□ -2.57
ACTBP60709 Y_RNA.322-201ENST00000365151 102 ntBASIC-1□□□□□ -2.57
ACTBP60709 Y_RNA.416-201ENST00000384014 113 ntBASIC-1□□□□□ -2.57
ACTBP60709 ELOCP20-201ENST00000422460 345 ntBASIC-1□□□□□ -2.57
ACTBP60709 Y_RNA.650-201ENST00000459002 102 ntBASIC-1□□□□□ -2.57
ACTBP60709 RNU2-35P-201ENST00000516446 142 ntBASIC-1□□□□□ -2.57
ACTBP60709 Y_RNA.777-201ENST00000516982 102 ntBASIC-1□□□□□ -2.57
ACTBP60709 Y_RNA.771-201ENST00000598668 102 ntBASIC-1□□□□□ -2.57
ACTBP60709 AC011603.4-201ENST00000611325 277 ntBASIC-1□□□□□ -2.57
ACTBP60709 Y_RNA.789-201ENST00000622480 102 ntBASIC-1□□□□□ -2.57
ACTBP60709 AP001362.1-201ENST00000625165 124 ntBASIC-1□□□□□ -2.57
ACTBP60709 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.01□□□□□ -2.57
ACTBP60709 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.01□□□□□ -2.57
ACTBP60709 RNU6-770P-201ENST00000363929 105 ntBASIC-1.01□□□□□ -2.57
ACTBP60709 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.01□□□□□ -2.57
ACTBP60709 RNA5SP331-201ENST00000364986 107 ntBASIC-1.01□□□□□ -2.57
ACTBP60709 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.01□□□□□ -2.57
ACTBP60709 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.01□□□□□ -2.57
ACTBP60709 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.01□□□□□ -2.57
ACTBP60709 SNORA49-201ENST00000386157 136 ntBASIC-1.01□□□□□ -2.57
ACTBP60709 RNU7-55P-201ENST00000459426 62 ntBASIC-1.01□□□□□ -2.57
ACTBP60709 RNA5SP236-201ENST00000516169 116 ntBASIC-1.01□□□□□ -2.57
ACTBP60709 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.01□□□□□ -2.57
ACTBP60709 AP000676.1-201ENST00000533307 52 ntBASIC-1.01□□□□□ -2.57
ACTBP60709 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.02□□□□□ -2.57
ACTBP60709 RNU6-450P-201ENST00000364654 107 ntBASIC-1.02□□□□□ -2.57
ACTBP60709 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.02□□□□□ -2.57
ACTBP60709 RNU6-571P-201ENST00000384128 107 ntBASIC-1.02□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 359.1 ms