Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNA5SP133-201ENST00000363368 119 ntBASIC0.33□□□□□ -2.36
RHBDL3P58872 RNA5SP62-201ENST00000363457 110 ntBASIC0.33□□□□□ -2.36
RHBDL3P58872 RNU6-1135P-201ENST00000411083 103 ntBASIC0.33□□□□□ -2.36
RHBDL3P58872 RNU7-164P-201ENST00000459221 62 ntBASIC0.33□□□□□ -2.36
RHBDL3P58872 AC108740.1-201ENST00000498629 225 ntBASIC0.33□□□□□ -2.36
RHBDL3P58872 SNORA62.5-201ENST00000516634 120 ntBASIC0.33□□□□□ -2.36
RHBDL3P58872 AC022559.1-201ENST00000520905 205 ntBASIC0.33□□□□□ -2.36
RHBDL3P58872 MIR548AE2-201ENST00000583456 67 ntBASIC0.33□□□□□ -2.36
RHBDL3P58872 AC023932.2-201ENST00000603176 175 ntBASIC0.33□□□□□ -2.36
RHBDL3P58872 Y_RNA.662-201ENST00000516028 97 ntBASIC0.32□□□□□ -2.36
RHBDL3P58872 RNA5SP227-201ENST00000516184 113 ntBASIC0.32□□□□□ -2.36
RHBDL3P58872 RNU7-137P-201ENST00000516788 62 ntBASIC0.32□□□□□ -2.36
RHBDL3P58872 MTND5P34-201ENST00000568888 325 ntBASIC0.32□□□□□ -2.36
RHBDL3P58872 MIR6828-201ENST00000636181 60 ntBASIC0.32□□□□□ -2.36
RHBDL3P58872 U6.109-201ENST00000636749 87 ntBASIC0.32□□□□□ -2.36
RHBDL3P58872 SNORA36.1-201ENST00000363424 132 ntBASIC0.31□□□□□ -2.36
RHBDL3P58872 RNU4-69P-201ENST00000410677 143 ntBASIC0.31□□□□□ -2.36
RHBDL3P58872 RNU7-120P-201ENST00000459334 63 ntBASIC0.31□□□□□ -2.36
RHBDL3P58872 RNU2-35P-201ENST00000516446 142 ntBASIC0.31□□□□□ -2.36
RHBDL3P58872 RNU6-531P-201ENST00000516694 104 ntBASIC0.31□□□□□ -2.36
RHBDL3P58872 MIR103A1-201ENST00000362165 78 ntBASIC0.3□□□□□ -2.36
RHBDL3P58872 Y_RNA.29-201ENST00000362570 113 ntBASIC0.3□□□□□ -2.36
RHBDL3P58872 RNU6-379P-201ENST00000363813 104 ntBASIC0.3□□□□□ -2.36
RHBDL3P58872 SNORD77B-201ENST00000391112 67 ntBASIC0.3□□□□□ -2.36
RHBDL3P58872 AL603914.1-201ENST00000401964 204 ntBASIC0.3□□□□□ -2.36
RHBDL3P58872 RNA5SP47-201ENST00000517230 109 ntBASIC0.3□□□□□ -2.36
RHBDL3P58872 RNU7-10P-201ENST00000607194 63 ntBASIC0.3□□□□□ -2.36
RHBDL3P58872 MIR6718-201ENST00000616153 80 ntBASIC0.3□□□□□ -2.36
RHBDL3P58872 SNORD28-201ENST00000384706 75 ntBASIC0.29□□□□□ -2.36
RHBDL3P58872 SNORD67.1-201ENST00000516618 108 ntBASIC0.29□□□□□ -2.36
RHBDL3P58872 Y_RNA.441-201ENST00000384123 112 ntBASIC0.28□□□□□ -2.36
RHBDL3P58872 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
RHBDL3P58872 AC073261.1-201ENST00000429409 121 ntBASIC0.28□□□□□ -2.36
RHBDL3P58872 Y_RNA.690-201ENST00000516603 95 ntBASIC0.28□□□□□ -2.36
RHBDL3P58872 AC112693.2-201ENST00000556538 232 ntBASIC0.28□□□□□ -2.36
RHBDL3P58872 MIR5093-201ENST00000583199 100 ntBASIC0.28□□□□□ -2.36
RHBDL3P58872 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.28□□□□□ -2.36
RHBDL3P58872 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.36
RHBDL3P58872 Y_RNA.56-201ENST00000362798 112 ntBASIC0.27□□□□□ -2.37
RHBDL3P58872 RNY1P2-201ENST00000364820 117 ntBASIC0.27□□□□□ -2.37
RHBDL3P58872 SUMO1P3-201ENST00000439961 304 ntBASIC0.27□□□□□ -2.37
RHBDL3P58872 RNU6-848P-201ENST00000515948 107 ntBASIC0.27□□□□□ -2.37
RHBDL3P58872 RNU6-617P-201ENST00000516147 107 ntBASIC0.27□□□□□ -2.37
RHBDL3P58872 RNU6-473P-201ENST00000516164 107 ntBASIC0.27□□□□□ -2.37
RHBDL3P58872 RNU6-1049P-201ENST00000516414 107 ntBASIC0.27□□□□□ -2.37
RHBDL3P58872 Y_RNA.681-201ENST00000516445 113 ntBASIC0.27□□□□□ -2.37
RHBDL3P58872 MIR4315-1-201ENST00000636800 73 ntBASIC0.27□□□□□ -2.37
RHBDL3P58872 MIR4315-2-201ENST00000640925 73 ntBASIC0.27□□□□□ -2.37
RHBDL3P58872 RNA5SP63-201ENST00000391225 112 ntBASIC0.26□□□□□ -2.37
RHBDL3P58872 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.26□□□□□ -2.37
RHBDL3P58872 RNU2-60P-201ENST00000517290 128 ntBASIC0.26□□□□□ -2.37
RHBDL3P58872 AC138749.4-201ENST00000563970 127 ntBASIC0.26□□□□□ -2.37
RHBDL3P58872 MIR548H5-201ENST00000580314 60 ntBASIC0.26□□□□□ -2.37
RHBDL3P58872 Y_RNA.68-201ENST00000362881 102 ntBASIC0.25□□□□□ -2.37
RHBDL3P58872 Y_RNA.119-201ENST00000363301 96 ntBASIC0.25□□□□□ -2.37
RHBDL3P58872 RNU4-67P-201ENST00000364569 141 ntBASIC0.25□□□□□ -2.37
RHBDL3P58872 Y_RNA.298-201ENST00000364960 107 ntBASIC0.25□□□□□ -2.37
RHBDL3P58872 RNU6-429P-201ENST00000384582 108 ntBASIC0.25□□□□□ -2.37
RHBDL3P58872 RNU7-123P-201ENST00000515911 60 ntBASIC0.25□□□□□ -2.37
RHBDL3P58872 AC138869.1-201ENST00000568623 124 ntBASIC0.25□□□□□ -2.37
RHBDL3P58872 MIR7107-201ENST00000611489 80 ntBASIC0.25□□□□□ -2.37
RHBDL3P58872 MIR3658-201ENST00000636291 56 ntBASIC0.25□□□□□ -2.37
RHBDL3P58872 RNU6-138P-201ENST00000515952 107 ntBASIC0.24□□□□□ -2.37
RHBDL3P58872 RNU6-388P-201ENST00000517012 105 ntBASIC0.24□□□□□ -2.37
RHBDL3P58872 RNU6-389P-201ENST00000517048 105 ntBASIC0.24□□□□□ -2.37
RHBDL3P58872 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.24□□□□□ -2.37
RHBDL3P58872 AC244669.1-204ENST00000621564 178 ntBASIC0.24□□□□□ -2.37
RHBDL3P58872 Y_RNA.785-201ENST00000384290 109 ntBASIC0.23□□□□□ -2.37
RHBDL3P58872 RNU6-861P-201ENST00000516745 106 ntBASIC0.23□□□□□ -2.37
RHBDL3P58872 AC069113.3-201ENST00000521019 150 ntBASIC0.23□□□□□ -2.37
RHBDL3P58872 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
RHBDL3P58872 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.23□□□□□ -2.37
RHBDL3P58872 Y_RNA.272-201ENST00000364696 102 ntBASIC0.22□□□□□ -2.37
RHBDL3P58872 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.22□□□□□ -2.37
RHBDL3P58872 SNORA81.3-201ENST00000517283 198 ntBASIC0.22□□□□□ -2.37
RHBDL3P58872 Y_RNA.366-201ENST00000365540 102 ntBASIC0.21□□□□□ -2.38
RHBDL3P58872 Y_RNA.651-201ENST00000459380 103 ntBASIC0.21□□□□□ -2.38
RHBDL3P58872 AL359881.1-201ENST00000602916 267 ntBASIC0.21□□□□□ -2.38
RHBDL3P58872 AL137067.1-201ENST00000615933 120 ntBASIC0.21□□□□□ -2.38
RHBDL3P58872 SNORA9.1-201ENST00000362412 131 ntBASIC0.2□□□□□ -2.38
RHBDL3P58872 Y_RNA.98-201ENST00000363109 102 ntBASIC0.2□□□□□ -2.38
RHBDL3P58872 Y_RNA.280-201ENST00000364765 112 ntBASIC0.2□□□□□ -2.38
RHBDL3P58872 RNU6-1126P-201ENST00000384002 107 ntBASIC0.2□□□□□ -2.38
RHBDL3P58872 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.2□□□□□ -2.38
RHBDL3P58872 AC105081.1-201ENST00000617727 106 ntBASIC0.2□□□□□ -2.38
RHBDL3P58872 TUG1_4.1-201ENST00000619464 181 ntBASIC0.2□□□□□ -2.38
RHBDL3P58872 Y_RNA.178-201ENST00000363832 102 ntBASIC0.19□□□□□ -2.38
RHBDL3P58872 RNU6-682P-201ENST00000363843 106 ntBASIC0.19□□□□□ -2.38
RHBDL3P58872 RNU6-309P-201ENST00000364573 106 ntBASIC0.19□□□□□ -2.38
RHBDL3P58872 AC244505.6-201ENST00000452829 130 ntBASIC0.19□□□□□ -2.38
RHBDL3P58872 Y_RNA.257-201ENST00000364596 102 ntBASIC0.18□□□□□ -2.38
RHBDL3P58872 RNU4-11P-201ENST00000365287 132 ntBASIC0.18□□□□□ -2.38
RHBDL3P58872 RNU7-48P-201ENST00000458875 63 ntBASIC0.18□□□□□ -2.38
RHBDL3P58872 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.18□□□□□ -2.38
RHBDL3P58872 RNU6-449P-201ENST00000383914 107 ntBASIC0.17□□□□□ -2.38
RHBDL3P58872 RNU6-815P-201ENST00000384080 113 ntBASIC0.17□□□□□ -2.38
RHBDL3P58872 RNU5E-3P-201ENST00000515913 68 ntBASIC0.17□□□□□ -2.38
RHBDL3P58872 SNORD115-24-201ENST00000363528 82 ntBASIC0.16□□□□□ -2.38
RHBDL3P58872 SNORA63.5-201ENST00000363548 123 ntBASIC0.16□□□□□ -2.38
RHBDL3P58872 MIR513C-201ENST00000401352 84 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 207 ms