Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 SNORD67.1-201ENST00000516618 108 ntBASIC0.25□□□□□ -2.37
LIG4P49917 RNU6-531P-201ENST00000516694 104 ntBASIC0.25□□□□□ -2.37
LIG4P49917 AC108081.1-201ENST00000604358 221 ntBASIC0.25□□□□□ -2.37
LIG4P49917 RNU4-58P-201ENST00000363192 141 ntBASIC0.24□□□□□ -2.37
LIG4P49917 RNU6-1307P-201ENST00000391012 103 ntBASIC0.24□□□□□ -2.37
LIG4P49917 RNU6-1135P-201ENST00000411083 103 ntBASIC0.24□□□□□ -2.37
LIG4P49917 SCARNA16.5-201ENST00000517114 183 ntBASIC0.24□□□□□ -2.37
LIG4P49917 AP002392.1-201ENST00000537692 208 ntBASIC0.24□□□□□ -2.37
LIG4P49917 AC138907.4-201ENST00000570107 226 ntBASIC0.24□□□□□ -2.37
LIG4P49917 U6.109-201ENST00000636749 87 ntBASIC0.24□□□□□ -2.37
LIG4P49917 RNU6-1104P-201ENST00000384723 104 ntBASIC0.23□□□□□ -2.37
LIG4P49917 RNU2-59P-201ENST00000410482 191 ntBASIC0.23□□□□□ -2.37
LIG4P49917 RNA5SP47-201ENST00000517230 109 ntBASIC0.23□□□□□ -2.37
LIG4P49917 IGKV1-22-201ENST00000524313 326 ntBASIC0.23□□□□□ -2.37
LIG4P49917 DNAJC19P2-201ENST00000593340 302 ntBASIC0.23□□□□□ -2.37
LIG4P49917 AC021443.1-201ENST00000604478 211 ntBASIC0.23□□□□□ -2.37
LIG4P49917 MIR7107-201ENST00000611489 80 ntBASIC0.23□□□□□ -2.37
LIG4P49917 MIR8087-201ENST00000612745 78 ntBASIC0.23□□□□□ -2.37
LIG4P49917 MIR6755-201ENST00000619993 66 ntBASIC0.23□□□□□ -2.37
LIG4P49917 RNU6-1099P-201ENST00000363533 107 ntBASIC0.22□□□□□ -2.37
LIG4P49917 SNORA63.5-201ENST00000363548 123 ntBASIC0.22□□□□□ -2.37
LIG4P49917 RNU6-716P-201ENST00000365621 103 ntBASIC0.22□□□□□ -2.37
LIG4P49917 SNORD28-201ENST00000384706 75 ntBASIC0.22□□□□□ -2.37
LIG4P49917 AC073261.1-201ENST00000429409 121 ntBASIC0.22□□□□□ -2.37
LIG4P49917 RNA5SP227-201ENST00000516184 113 ntBASIC0.22□□□□□ -2.37
LIG4P49917 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
LIG4P49917 MIR4639-201ENST00000584938 69 ntBASIC0.22□□□□□ -2.37
LIG4P49917 RNU1-29P-201ENST00000606574 126 ntBASIC0.22□□□□□ -2.37
LIG4P49917 RNU6-1318P-201ENST00000365389 103 ntBASIC0.21□□□□□ -2.38
LIG4P49917 AC108059.2-201ENST00000434626 151 ntBASIC0.21□□□□□ -2.38
LIG4P49917 RNU7-164P-201ENST00000459221 62 ntBASIC0.21□□□□□ -2.38
LIG4P49917 MIR4514-201ENST00000581410 57 ntBASIC0.21□□□□□ -2.38
LIG4P49917 AC105081.1-201ENST00000617727 106 ntBASIC0.21□□□□□ -2.38
LIG4P49917 SNORD114-10-201ENST00000363409 72 ntBASIC0.2□□□□□ -2.38
LIG4P49917 Y_RNA.272-201ENST00000364696 102 ntBASIC0.2□□□□□ -2.38
LIG4P49917 RNY1P2-201ENST00000364820 117 ntBASIC0.2□□□□□ -2.38
LIG4P49917 Y_RNA.298-201ENST00000364960 107 ntBASIC0.2□□□□□ -2.38
LIG4P49917 RNU6-1130P-201ENST00000365434 107 ntBASIC0.2□□□□□ -2.38
LIG4P49917 Y_RNA.401-201ENST00000383965 117 ntBASIC0.2□□□□□ -2.38
LIG4P49917 RNU6-815P-201ENST00000384080 113 ntBASIC0.2□□□□□ -2.38
LIG4P49917 Y_RNA.785-201ENST00000384290 109 ntBASIC0.2□□□□□ -2.38
LIG4P49917 MIRLET7F2-201ENST00000385277 83 ntBASIC0.2□□□□□ -2.38
LIG4P49917 MT-TI-201ENST00000387365 69 ntBASIC0.2□□□□□ -2.38
LIG4P49917 SNORD37.2-201ENST00000391075 66 ntBASIC0.2□□□□□ -2.38
LIG4P49917 PCNPP3-201ENST00000393579 471 ntBASIC0.2□□□□□ -2.38
LIG4P49917 AL603914.1-201ENST00000401964 204 ntBASIC0.2□□□□□ -2.38
LIG4P49917 AC069271.1-201ENST00000445577 156 ntBASIC0.2□□□□□ -2.38
LIG4P49917 AC098479.1-201ENST00000609225 154 ntBASIC0.2□□□□□ -2.38
LIG4P49917 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
LIG4P49917 AC004792.1-201ENST00000614523 137 ntBASIC0.2□□□□□ -2.38
LIG4P49917 AC091304.10-201ENST00000641554 121 ntBASIC0.2□□□□□ -2.38
LIG4P49917 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.2□□□□□ -2.38
LIG4P49917 MIR101-2-201ENST00000362195 79 ntBASIC0.19□□□□□ -2.38
LIG4P49917 MIR330-201ENST00000362196 94 ntBASIC0.19□□□□□ -2.38
LIG4P49917 RNA5SP325-201ENST00000363756 130 ntBASIC0.19□□□□□ -2.38
LIG4P49917 SNORD18B-201ENST00000365659 72 ntBASIC0.19□□□□□ -2.38
LIG4P49917 RNU6-187P-201ENST00000384139 106 ntBASIC0.19□□□□□ -2.38
LIG4P49917 RNU6-1321P-201ENST00000390905 107 ntBASIC0.19□□□□□ -2.38
LIG4P49917 RNU6-394P-201ENST00000410735 107 ntBASIC0.19□□□□□ -2.38
LIG4P49917 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.19□□□□□ -2.38
LIG4P49917 AC112693.2-201ENST00000556538 232 ntBASIC0.19□□□□□ -2.38
LIG4P49917 AC244669.1-204ENST00000621564 178 ntBASIC0.19□□□□□ -2.38
LIG4P49917 Y_RNA.85-201ENST00000363014 111 ntBASIC0.18□□□□□ -2.38
LIG4P49917 Y_RNA.115-201ENST00000363272 98 ntBASIC0.18□□□□□ -2.38
LIG4P49917 Y_RNA.119-201ENST00000363301 96 ntBASIC0.18□□□□□ -2.38
LIG4P49917 Y_RNA.257-201ENST00000364596 102 ntBASIC0.18□□□□□ -2.38
LIG4P49917 Y_RNA.552-201ENST00000384665 112 ntBASIC0.18□□□□□ -2.38
LIG4P49917 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
LIG4P49917 Y_RNA.584-201ENST00000391090 114 ntBASIC0.18□□□□□ -2.38
LIG4P49917 snosnR66.1-201ENST00000391095 99 ntBASIC0.18□□□□□ -2.38
LIG4P49917 Y_RNA.690-201ENST00000516603 95 ntBASIC0.18□□□□□ -2.38
LIG4P49917 RNY4P20-201ENST00000516678 93 ntBASIC0.18□□□□□ -2.38
LIG4P49917 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.18□□□□□ -2.38
LIG4P49917 AC069113.3-201ENST00000521019 150 ntBASIC0.18□□□□□ -2.38
LIG4P49917 Y_RNA.280-201ENST00000364765 112 ntBASIC0.17□□□□□ -2.38
LIG4P49917 RNU4-11P-201ENST00000365287 132 ntBASIC0.17□□□□□ -2.38
LIG4P49917 Y_RNA.476-201ENST00000384347 108 ntBASIC0.17□□□□□ -2.38
LIG4P49917 MIR206-201ENST00000384872 86 ntBASIC0.17□□□□□ -2.38
LIG4P49917 RNU6-460P-201ENST00000391158 108 ntBASIC0.17□□□□□ -2.38
LIG4P49917 RNU4-69P-201ENST00000410677 143 ntBASIC0.17□□□□□ -2.38
LIG4P49917 Y_RNA.662-201ENST00000516028 97 ntBASIC0.17□□□□□ -2.38
LIG4P49917 MIR3121-201ENST00000579680 77 ntBASIC0.17□□□□□ -2.38
LIG4P49917 TUG1_4.1-201ENST00000619464 181 ntBASIC0.17□□□□□ -2.38
LIG4P49917 Y_RNA.29-201ENST00000362570 113 ntBASIC0.16□□□□□ -2.38
LIG4P49917 Y_RNA.299-201ENST00000364973 94 ntBASIC0.16□□□□□ -2.38
LIG4P49917 RNU6-1126P-201ENST00000384002 107 ntBASIC0.16□□□□□ -2.38
LIG4P49917 Y_RNA.580-201ENST00000391004 95 ntBASIC0.16□□□□□ -2.38
LIG4P49917 MIR1197-201ENST00000408818 88 ntBASIC0.16□□□□□ -2.38
LIG4P49917 AC244505.6-201ENST00000452829 130 ntBASIC0.16□□□□□ -2.38
LIG4P49917 Y_RNA.700-201ENST00000516806 100 ntBASIC0.16□□□□□ -2.38
LIG4P49917 RNA5SP330-201ENST00000517096 96 ntBASIC0.16□□□□□ -2.38
LIG4P49917 AC023932.2-201ENST00000603176 175 ntBASIC0.16□□□□□ -2.38
LIG4P49917 MIR4315-1-201ENST00000636800 73 ntBASIC0.16□□□□□ -2.38
LIG4P49917 MIR4315-2-201ENST00000640925 73 ntBASIC0.16□□□□□ -2.38
LIG4P49917 Y_RNA.56-201ENST00000362798 112 ntBASIC0.15□□□□□ -2.39
LIG4P49917 RNA5SP457-201ENST00000363657 124 ntBASIC0.15□□□□□ -2.39
LIG4P49917 SNORA2A-201ENST00000383885 135 ntBASIC0.15□□□□□ -2.39
LIG4P49917 MIR548H2-201ENST00000408874 88 ntBASIC0.15□□□□□ -2.39
LIG4P49917 RNU6-1232P-201ENST00000516299 86 ntBASIC0.15□□□□□ -2.39
LIG4P49917 RNU7-161P-201ENST00000517289 62 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms