Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 U6.106-201ENST00000636360 105 ntBASIC-0.08□□□□□ -2.42
CXCL12P48061 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.09□□□□□ -2.42
CXCL12P48061 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.09□□□□□ -2.42
CXCL12P48061 MIR145-201ENST00000384967 88 ntBASIC-0.09□□□□□ -2.42
CXCL12P48061 RNA5SP98-201ENST00000363158 137 ntBASIC-0.1□□□□□ -2.43
CXCL12P48061 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.1□□□□□ -2.43
CXCL12P48061 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.1□□□□□ -2.43
CXCL12P48061 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.1□□□□□ -2.43
CXCL12P48061 RNU6-726P-201ENST00000364680 107 ntBASIC-0.1□□□□□ -2.43
CXCL12P48061 RNY1P2-201ENST00000364820 117 ntBASIC-0.1□□□□□ -2.43
CXCL12P48061 RNU6-690P-201ENST00000365242 106 ntBASIC-0.1□□□□□ -2.43
CXCL12P48061 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.1□□□□□ -2.43
CXCL12P48061 MIR548H2-201ENST00000408874 88 ntBASIC-0.1□□□□□ -2.43
CXCL12P48061 AC244505.6-201ENST00000452829 130 ntBASIC-0.1□□□□□ -2.43
CXCL12P48061 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.1□□□□□ -2.43
CXCL12P48061 RNU2-35P-201ENST00000516446 142 ntBASIC-0.1□□□□□ -2.43
CXCL12P48061 SNORD114-31-201ENST00000363219 75 ntBASIC-0.11□□□□□ -2.43
CXCL12P48061 SNORD114-10-201ENST00000363409 72 ntBASIC-0.11□□□□□ -2.43
CXCL12P48061 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.11□□□□□ -2.43
CXCL12P48061 RNU6-768P-201ENST00000384683 107 ntBASIC-0.11□□□□□ -2.43
CXCL12P48061 MIR548L-201ENST00000408303 86 ntBASIC-0.11□□□□□ -2.43
CXCL12P48061 MIR1270-201ENST00000459320 83 ntBASIC-0.11□□□□□ -2.43
CXCL12P48061 RNU7-161P-201ENST00000517289 62 ntBASIC-0.11□□□□□ -2.43
CXCL12P48061 SNORA70.25-201ENST00000612741 95 ntBASIC-0.11□□□□□ -2.43
CXCL12P48061 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.12□□□□□ -2.43
CXCL12P48061 RNU6-302P-201ENST00000365249 107 ntBASIC-0.12□□□□□ -2.43
CXCL12P48061 SNORD58.1-201ENST00000391313 66 ntBASIC-0.12□□□□□ -2.43
CXCL12P48061 Z95118.1-201ENST00000421372 247 ntBASIC-0.12□□□□□ -2.43
CXCL12P48061 RNU7-104P-201ENST00000459398 79 ntBASIC-0.12□□□□□ -2.43
CXCL12P48061 RNU6-240P-201ENST00000516098 97 ntBASIC-0.12□□□□□ -2.43
CXCL12P48061 RNU6-782P-201ENST00000516852 104 ntBASIC-0.12□□□□□ -2.43
CXCL12P48061 AC138869.1-201ENST00000568623 124 ntBASIC-0.12□□□□□ -2.43
CXCL12P48061 AC098479.1-201ENST00000609225 154 ntBASIC-0.12□□□□□ -2.43
CXCL12P48061 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.13□□□□□ -2.43
CXCL12P48061 MIR501-201ENST00000390204 84 ntBASIC-0.13□□□□□ -2.43
CXCL12P48061 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.13□□□□□ -2.43
CXCL12P48061 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
CXCL12P48061 AC141557.1-201ENST00000540982 400 ntBASIC-0.13□□□□□ -2.43
CXCL12P48061 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.13□□□□□ -2.43
CXCL12P48061 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.13□□□□□ -2.43
CXCL12P48061 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.13□□□□□ -2.43
CXCL12P48061 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.13□□□□□ -2.43
CXCL12P48061 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.13□□□□□ -2.43
CXCL12P48061 AL162376.1-201ENST00000624117 175 ntBASIC-0.13□□□□□ -2.43
CXCL12P48061 SNORA63-201ENST00000363450 132 ntBASIC-0.14□□□□□ -2.43
CXCL12P48061 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.14□□□□□ -2.43
CXCL12P48061 RNU6-738P-201ENST00000384531 106 ntBASIC-0.14□□□□□ -2.43
CXCL12P48061 RNU6-429P-201ENST00000384582 108 ntBASIC-0.14□□□□□ -2.43
CXCL12P48061 RNU6-918P-201ENST00000391219 106 ntBASIC-0.14□□□□□ -2.43
CXCL12P48061 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.14□□□□□ -2.43
CXCL12P48061 MIR548H5-201ENST00000580314 60 ntBASIC-0.14□□□□□ -2.43
CXCL12P48061 RNA5SP403-201ENST00000363598 108 ntBASIC-0.15□□□□□ -2.43
CXCL12P48061 RNU6-818P-201ENST00000364837 108 ntBASIC-0.15□□□□□ -2.43
CXCL12P48061 RNU6-929P-201ENST00000384429 107 ntBASIC-0.15□□□□□ -2.43
CXCL12P48061 MIR568-201ENST00000385036 95 ntBASIC-0.15□□□□□ -2.43
CXCL12P48061 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.15□□□□□ -2.43
CXCL12P48061 RNA5SP25-201ENST00000410815 110 ntBASIC-0.15□□□□□ -2.43
CXCL12P48061 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.15□□□□□ -2.43
CXCL12P48061 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.15□□□□□ -2.43
CXCL12P48061 AC138907.4-201ENST00000570107 226 ntBASIC-0.15□□□□□ -2.43
CXCL12P48061 MIR3128-201ENST00000581957 66 ntBASIC-0.15□□□□□ -2.43
CXCL12P48061 AC021443.1-201ENST00000604478 211 ntBASIC-0.15□□□□□ -2.43
CXCL12P48061 AC011603.4-201ENST00000611325 277 ntBASIC-0.15□□□□□ -2.43
CXCL12P48061 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.16□□□□□ -2.44
CXCL12P48061 RNU6-652P-201ENST00000365488 107 ntBASIC-0.16□□□□□ -2.44
CXCL12P48061 RNU6-756P-201ENST00000383997 107 ntBASIC-0.16□□□□□ -2.44
CXCL12P48061 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.16□□□□□ -2.44
CXCL12P48061 RNU6-269P-201ENST00000391077 97 ntBASIC-0.16□□□□□ -2.44
CXCL12P48061 RNU7-164P-201ENST00000459221 62 ntBASIC-0.16□□□□□ -2.44
CXCL12P48061 RNU6-758P-201ENST00000516292 89 ntBASIC-0.16□□□□□ -2.44
CXCL12P48061 RNU2-60P-201ENST00000517290 128 ntBASIC-0.16□□□□□ -2.44
CXCL12P48061 MIR4500-201ENST00000579472 76 ntBASIC-0.16□□□□□ -2.44
CXCL12P48061 MIR4493-201ENST00000584016 73 ntBASIC-0.16□□□□□ -2.44
CXCL12P48061 MIR4743-201ENST00000584576 69 ntBASIC-0.16□□□□□ -2.44
CXCL12P48061 MIR3149-201ENST00000584629 83 ntBASIC-0.16□□□□□ -2.44
CXCL12P48061 AP001180.6-201ENST00000584918 159 ntBASIC-0.16□□□□□ -2.44
CXCL12P48061 RNY4P3-201ENST00000365254 95 ntBASIC-0.17□□□□□ -2.44
CXCL12P48061 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.17□□□□□ -2.44
CXCL12P48061 RNU6-47P-201ENST00000383866 107 ntBASIC-0.17□□□□□ -2.44
CXCL12P48061 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.17□□□□□ -2.44
CXCL12P48061 MIR635-201ENST00000384830 98 ntBASIC-0.17□□□□□ -2.44
CXCL12P48061 MIR892B-201ENST00000401279 77 ntBASIC-0.17□□□□□ -2.44
CXCL12P48061 RNU4-69P-201ENST00000410677 143 ntBASIC-0.17□□□□□ -2.44
CXCL12P48061 MTCYBP9-201ENST00000431021 303 ntBASIC-0.17□□□□□ -2.44
CXCL12P48061 snoU13.19-201ENST00000459148 104 ntBASIC-0.17□□□□□ -2.44
CXCL12P48061 TRAJ51-201ENST00000504127 63 ntBASIC-0.17□□□□□ -2.44
CXCL12P48061 RNU7-123P-201ENST00000515911 60 ntBASIC-0.17□□□□□ -2.44
CXCL12P48061 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.17□□□□□ -2.44
CXCL12P48061 MIR5706-201ENST00000579841 80 ntBASIC-0.17□□□□□ -2.44
CXCL12P48061 MIR548AD-201ENST00000584780 82 ntBASIC-0.17□□□□□ -2.44
CXCL12P48061 RNU6-161P-201ENST00000363051 106 ntBASIC-0.18□□□□□ -2.44
CXCL12P48061 RNU6-508P-201ENST00000363231 103 ntBASIC-0.18□□□□□ -2.44
CXCL12P48061 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.18□□□□□ -2.44
CXCL12P48061 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.18□□□□□ -2.44
CXCL12P48061 MIR206-201ENST00000384872 86 ntBASIC-0.18□□□□□ -2.44
CXCL12P48061 MIR214-201ENST00000385214 110 ntBASIC-0.18□□□□□ -2.44
CXCL12P48061 SNORD41.1-201ENST00000391000 69 ntBASIC-0.18□□□□□ -2.44
CXCL12P48061 RNU6-588P-201ENST00000410281 105 ntBASIC-0.18□□□□□ -2.44
CXCL12P48061 MTATP6P21-201ENST00000440681 189 ntBASIC-0.18□□□□□ -2.44
CXCL12P48061 AC107027.2-201ENST00000512197 115 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 244.9 ms