Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC087741.2-201ENST00000619415 172 ntBASIC0.74□□□□□ -2.29
PTPN9P43378 RNU4-58P-201ENST00000363192 141 ntBASIC0.73□□□□□ -2.29
PTPN9P43378 MIR206-201ENST00000384872 86 ntBASIC0.73□□□□□ -2.29
PTPN9P43378 MT-TI-201ENST00000387365 69 ntBASIC0.73□□□□□ -2.29
PTPN9P43378 AL603908.1-201ENST00000406098 201 ntBASIC0.73□□□□□ -2.29
PTPN9P43378 RNA5SP220-201ENST00000516298 104 ntBASIC0.73□□□□□ -2.29
PTPN9P43378 RNU7-6P-201ENST00000516845 62 ntBASIC0.73□□□□□ -2.29
PTPN9P43378 AL078603.1-201ENST00000603824 313 ntBASIC0.73□□□□□ -2.29
PTPN9P43378 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
PTPN9P43378 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.72□□□□□ -2.29
PTPN9P43378 RNU6-81P-201ENST00000365608 104 ntBASIC0.72□□□□□ -2.29
PTPN9P43378 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.72□□□□□ -2.29
PTPN9P43378 MIR548J-201ENST00000408833 112 ntBASIC0.72□□□□□ -2.29
PTPN9P43378 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
PTPN9P43378 SUMO1P3-201ENST00000439961 304 ntBASIC0.72□□□□□ -2.29
PTPN9P43378 RNU7-2P-201ENST00000516096 62 ntBASIC0.72□□□□□ -2.29
PTPN9P43378 AC138749.4-201ENST00000563970 127 ntBASIC0.72□□□□□ -2.29
PTPN9P43378 MIR3612-201ENST00000579753 87 ntBASIC0.72□□□□□ -2.29
PTPN9P43378 MIR151B-201ENST00000584249 96 ntBASIC0.72□□□□□ -2.29
PTPN9P43378 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.72□□□□□ -2.29
PTPN9P43378 MTND5P18-201ENST00000445624 1801 ntBASIC0.71□□□□□ -2.3
PTPN9P43378 AL157777.2-201ENST00000258070 137 ntBASIC0.71□□□□□ -2.3
PTPN9P43378 RNA5SP133-201ENST00000363368 119 ntBASIC0.71□□□□□ -2.3
PTPN9P43378 RNY4P6-201ENST00000363667 96 ntBASIC0.71□□□□□ -2.3
PTPN9P43378 Y_RNA.218-201ENST00000364218 104 ntBASIC0.71□□□□□ -2.3
PTPN9P43378 SNORD115-35-201ENST00000365122 82 ntBASIC0.71□□□□□ -2.3
PTPN9P43378 RNU6-42P-201ENST00000384165 107 ntBASIC0.71□□□□□ -2.3
PTPN9P43378 MIR548D2-201ENST00000384955 97 ntBASIC0.71□□□□□ -2.3
PTPN9P43378 RNU7-48P-201ENST00000458875 63 ntBASIC0.71□□□□□ -2.3
PTPN9P43378 MIR3914-2-201ENST00000637339 95 ntBASIC0.71□□□□□ -2.3
PTPN9P43378 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.71□□□□□ -2.3
PTPN9P43378 Y_RNA.98-201ENST00000363109 102 ntBASIC0.7□□□□□ -2.3
PTPN9P43378 Y_RNA.174-201ENST00000363781 105 ntBASIC0.7□□□□□ -2.3
PTPN9P43378 RNU6-616P-201ENST00000384353 107 ntBASIC0.7□□□□□ -2.3
PTPN9P43378 SNORA72.6-201ENST00000384520 129 ntBASIC0.7□□□□□ -2.3
PTPN9P43378 RNU6-429P-201ENST00000384582 108 ntBASIC0.7□□□□□ -2.3
PTPN9P43378 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
PTPN9P43378 RNU6-1321P-201ENST00000390905 107 ntBASIC0.7□□□□□ -2.3
PTPN9P43378 RNU6-659P-201ENST00000516454 104 ntBASIC0.7□□□□□ -2.3
PTPN9P43378 SNORA25.16-201ENST00000516741 121 ntBASIC0.7□□□□□ -2.3
PTPN9P43378 RNU6-1234P-201ENST00000516877 103 ntBASIC0.7□□□□□ -2.3
PTPN9P43378 AC138907.6-201ENST00000568401 126 ntBASIC0.7□□□□□ -2.3
PTPN9P43378 U6.109-201ENST00000636749 87 ntBASIC0.7□□□□□ -2.3
PTPN9P43378 MIR18A-201ENST00000362310 71 ntBASIC0.69□□□□□ -2.3
PTPN9P43378 Y_RNA.71-201ENST00000362892 104 ntBASIC0.69□□□□□ -2.3
PTPN9P43378 RNA5SP117-201ENST00000365294 118 ntBASIC0.69□□□□□ -2.3
PTPN9P43378 SNORD116-14-201ENST00000383894 92 ntBASIC0.69□□□□□ -2.3
PTPN9P43378 SNORD116-17-201ENST00000383929 92 ntBASIC0.69□□□□□ -2.3
PTPN9P43378 SNORD116-15-201ENST00000384445 92 ntBASIC0.69□□□□□ -2.3
PTPN9P43378 RNU6-959P-201ENST00000384671 107 ntBASIC0.69□□□□□ -2.3
PTPN9P43378 SNORD116-19-201ENST00000384729 92 ntBASIC0.69□□□□□ -2.3
PTPN9P43378 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.69□□□□□ -2.3
PTPN9P43378 snoU13.18-201ENST00000459483 104 ntBASIC0.69□□□□□ -2.3
PTPN9P43378 RNU6-135P-201ENST00000516769 101 ntBASIC0.69□□□□□ -2.3
PTPN9P43378 AL590095.2-201ENST00000604136 117 ntBASIC0.69□□□□□ -2.3
PTPN9P43378 AC105081.1-201ENST00000617727 106 ntBASIC0.69□□□□□ -2.3
PTPN9P43378 U6.95-201ENST00000636931 70 ntBASIC0.69□□□□□ -2.3
PTPN9P43378 Y_RNA.119-201ENST00000363301 96 ntBASIC0.68□□□□□ -2.3
PTPN9P43378 Y_RNA.448-201ENST00000384185 108 ntBASIC0.68□□□□□ -2.3
PTPN9P43378 Y_RNA.508-201ENST00000384502 114 ntBASIC0.68□□□□□ -2.3
PTPN9P43378 Y_RNA.536-201ENST00000384621 113 ntBASIC0.68□□□□□ -2.3
PTPN9P43378 RNU7-107P-201ENST00000459121 61 ntBASIC0.68□□□□□ -2.3
PTPN9P43378 RNU6-1223P-201ENST00000517124 104 ntBASIC0.68□□□□□ -2.3
PTPN9P43378 DEFB131E-201ENST00000532329 154 ntBASIC0.68□□□□□ -2.3
PTPN9P43378 AP001362.1-201ENST00000625165 124 ntBASIC0.68□□□□□ -2.3
PTPN9P43378 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
PTPN9P43378 Y_RNA.127-201ENST00000363386 109 ntBASIC0.67□□□□□ -2.3
PTPN9P43378 Y_RNA.328-201ENST00000365208 113 ntBASIC0.67□□□□□ -2.3
PTPN9P43378 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
PTPN9P43378 RNU6-735P-201ENST00000410612 107 ntBASIC0.67□□□□□ -2.3
PTPN9P43378 RNA5SP222-201ENST00000411039 105 ntBASIC0.67□□□□□ -2.3
PTPN9P43378 RNU6-531P-201ENST00000516694 104 ntBASIC0.67□□□□□ -2.3
PTPN9P43378 Y_RNA.697-201ENST00000516776 113 ntBASIC0.67□□□□□ -2.3
PTPN9P43378 MIR4679-2-201ENST00000578358 77 ntBASIC0.67□□□□□ -2.3
PTPN9P43378 uc_338.16-201ENST00000621804 95 ntBASIC0.67□□□□□ -2.3
PTPN9P43378 RNU6-865P-201ENST00000364772 107 ntBASIC0.66□□□□□ -2.3
PTPN9P43378 Y_RNA.355-201ENST00000365462 98 ntBASIC0.66□□□□□ -2.3
PTPN9P43378 Y_RNA.563-201ENST00000384707 108 ntBASIC0.66□□□□□ -2.3
PTPN9P43378 Y_RNA.630-201ENST00000411370 108 ntBASIC0.66□□□□□ -2.3
PTPN9P43378 MIR5000-201ENST00000577717 103 ntBASIC0.66□□□□□ -2.3
PTPN9P43378 Y_RNA.773-201ENST00000607168 90 ntBASIC0.66□□□□□ -2.3
PTPN9P43378 MIR6734-201ENST00000621166 68 ntBASIC0.66□□□□□ -2.3
PTPN9P43378 Y_RNA.56-201ENST00000362798 112 ntBASIC0.65□□□□□ -2.31
PTPN9P43378 RNU6-291P-201ENST00000384720 107 ntBASIC0.65□□□□□ -2.31
PTPN9P43378 MIR140-201ENST00000385282 100 ntBASIC0.65□□□□□ -2.31
PTPN9P43378 RNU7-10P-201ENST00000607194 63 ntBASIC0.65□□□□□ -2.31
PTPN9P43378 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
PTPN9P43378 RNU6-363P-201ENST00000362895 105 ntBASIC0.64□□□□□ -2.31
PTPN9P43378 RNU6-535P-201ENST00000384722 107 ntBASIC0.64□□□□□ -2.31
PTPN9P43378 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.64□□□□□ -2.31
PTPN9P43378 AC008267.6-201ENST00000441664 139 ntBASIC0.64□□□□□ -2.31
PTPN9P43378 RPL39P34-201ENST00000477141 156 ntBASIC0.64□□□□□ -2.31
PTPN9P43378 MIR101-2-201ENST00000362195 79 ntBASIC0.63□□□□□ -2.31
PTPN9P43378 RNU6-1307P-201ENST00000391012 103 ntBASIC0.63□□□□□ -2.31
PTPN9P43378 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
PTPN9P43378 RNU6-469P-201ENST00000516253 101 ntBASIC0.63□□□□□ -2.31
PTPN9P43378 RNU6-1018P-201ENST00000516577 106 ntBASIC0.63□□□□□ -2.31
PTPN9P43378 RNU6-521P-201ENST00000516663 105 ntBASIC0.63□□□□□ -2.31
PTPN9P43378 MTND5P34-201ENST00000568888 325 ntBASIC0.63□□□□□ -2.31
PTPN9P43378 MIR548H5-201ENST00000580314 60 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms