Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SNORD116-15-201ENST00000384445 92 ntBASIC0.71□□□□□ -2.3
MTHFRP42898 SNORD116-19-201ENST00000384729 92 ntBASIC0.71□□□□□ -2.3
MTHFRP42898 U8.15-201ENST00000390947 134 ntBASIC0.71□□□□□ -2.3
MTHFRP42898 MIR1263-201ENST00000408324 86 ntBASIC0.71□□□□□ -2.3
MTHFRP42898 RNA5SP193-201ENST00000410353 107 ntBASIC0.71□□□□□ -2.3
MTHFRP42898 RNU4-69P-201ENST00000410677 143 ntBASIC0.71□□□□□ -2.3
MTHFRP42898 RNU6-733P-201ENST00000410759 104 ntBASIC0.71□□□□□ -2.3
MTHFRP42898 RNA5SP136-201ENST00000410906 107 ntBASIC0.71□□□□□ -2.3
MTHFRP42898 COX6CP6-201ENST00000490840 228 ntBASIC0.71□□□□□ -2.3
MTHFRP42898 RNU7-79P-201ENST00000516082 62 ntBASIC0.71□□□□□ -2.3
MTHFRP42898 RNU6-977P-201ENST00000516411 103 ntBASIC0.71□□□□□ -2.3
MTHFRP42898 RNU6-406P-201ENST00000516470 107 ntBASIC0.71□□□□□ -2.3
MTHFRP42898 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.7□□□□□ -2.3
MTHFRP42898 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
MTHFRP42898 Y_RNA.528-201ENST00000384575 108 ntBASIC0.7□□□□□ -2.3
MTHFRP42898 MIR520F-201ENST00000384824 87 ntBASIC0.7□□□□□ -2.3
MTHFRP42898 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
MTHFRP42898 RNA5SP237-201ENST00000410414 113 ntBASIC0.7□□□□□ -2.3
MTHFRP42898 AC244098.3-201ENST00000424803 96 ntBASIC0.7□□□□□ -2.3
MTHFRP42898 RNU7-185P-201ENST00000459215 60 ntBASIC0.7□□□□□ -2.3
MTHFRP42898 RNA5SP330-201ENST00000517096 96 ntBASIC0.7□□□□□ -2.3
MTHFRP42898 AC025166.1-201ENST00000612411 163 ntBASIC0.7□□□□□ -2.3
MTHFRP42898 AC087741.2-201ENST00000619415 172 ntBASIC0.7□□□□□ -2.3
MTHFRP42898 Y_RNA.127-201ENST00000363386 109 ntBASIC0.69□□□□□ -2.3
MTHFRP42898 MIR520H-201ENST00000385126 88 ntBASIC0.69□□□□□ -2.3
MTHFRP42898 RNU6-1307P-201ENST00000391012 103 ntBASIC0.69□□□□□ -2.3
MTHFRP42898 RNU1-119P-201ENST00000391122 165 ntBASIC0.69□□□□□ -2.3
MTHFRP42898 Y_RNA.588-201ENST00000391254 102 ntBASIC0.69□□□□□ -2.3
MTHFRP42898 RNU6-1061P-201ENST00000516530 99 ntBASIC0.69□□□□□ -2.3
MTHFRP42898 SNORD67.1-201ENST00000516618 108 ntBASIC0.69□□□□□ -2.3
MTHFRP42898 RNU7-137P-201ENST00000516788 62 ntBASIC0.69□□□□□ -2.3
MTHFRP42898 MIR4676-201ENST00000583078 72 ntBASIC0.69□□□□□ -2.3
MTHFRP42898 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.69□□□□□ -2.3
MTHFRP42898 AC132825.6-201ENST00000638861 357 ntBASIC0.69□□□□□ -2.3
MTHFRP42898 MTND5P18-201ENST00000445624 1801 ntBASIC0.68□□□□□ -2.3
MTHFRP42898 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.68□□□□□ -2.3
MTHFRP42898 SNORD115-19-201ENST00000363098 82 ntBASIC0.68□□□□□ -2.3
MTHFRP42898 SNORD115-18-201ENST00000363293 82 ntBASIC0.68□□□□□ -2.3
MTHFRP42898 SNORD115-17-201ENST00000364612 82 ntBASIC0.68□□□□□ -2.3
MTHFRP42898 Y_RNA.261-201ENST00000364631 102 ntBASIC0.68□□□□□ -2.3
MTHFRP42898 Y_RNA.299-201ENST00000364973 94 ntBASIC0.68□□□□□ -2.3
MTHFRP42898 RNU4-61P-201ENST00000411243 107 ntBASIC0.68□□□□□ -2.3
MTHFRP42898 MIR4804-201ENST00000581683 73 ntBASIC0.68□□□□□ -2.3
MTHFRP42898 Y_RNA.773-201ENST00000607168 90 ntBASIC0.68□□□□□ -2.3
MTHFRP42898 AL365222.1-201ENST00000614661 98 ntBASIC0.68□□□□□ -2.3
MTHFRP42898 MIR8066-201ENST00000617280 78 ntBASIC0.68□□□□□ -2.3
MTHFRP42898 AC243829.3-201ENST00000622177 108 ntBASIC0.68□□□□□ -2.3
MTHFRP42898 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
MTHFRP42898 AL157777.2-201ENST00000258070 137 ntBASIC0.67□□□□□ -2.3
MTHFRP42898 Y_RNA.353-201ENST00000365440 108 ntBASIC0.67□□□□□ -2.3
MTHFRP42898 Y_RNA.563-201ENST00000384707 108 ntBASIC0.67□□□□□ -2.3
MTHFRP42898 MIR125B2-201ENST00000385128 89 ntBASIC0.67□□□□□ -2.3
MTHFRP42898 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
MTHFRP42898 RNA5SP222-201ENST00000411039 105 ntBASIC0.67□□□□□ -2.3
MTHFRP42898 AC092628.1-201ENST00000436250 252 ntBASIC0.67□□□□□ -2.3
MTHFRP42898 RNU6-1333P-201ENST00000516162 93 ntBASIC0.67□□□□□ -2.3
MTHFRP42898 MIR3163-201ENST00000581592 73 ntBASIC0.67□□□□□ -2.3
MTHFRP42898 MIR8087-201ENST00000612745 78 ntBASIC0.67□□□□□ -2.3
MTHFRP42898 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
MTHFRP42898 MIR330-201ENST00000362196 94 ntBASIC0.66□□□□□ -2.3
MTHFRP42898 Y_RNA.85-201ENST00000363014 111 ntBASIC0.66□□□□□ -2.3
MTHFRP42898 Y_RNA.213-201ENST00000364178 111 ntBASIC0.66□□□□□ -2.3
MTHFRP42898 RNU6-616P-201ENST00000384353 107 ntBASIC0.66□□□□□ -2.3
MTHFRP42898 MIR1257-201ENST00000408490 117 ntBASIC0.66□□□□□ -2.3
MTHFRP42898 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.66□□□□□ -2.3
MTHFRP42898 RNU7-56P-201ENST00000458744 62 ntBASIC0.66□□□□□ -2.3
MTHFRP42898 SNORD33.1-201ENST00000516213 88 ntBASIC0.66□□□□□ -2.3
MTHFRP42898 RNU7-6P-201ENST00000516845 62 ntBASIC0.66□□□□□ -2.3
MTHFRP42898 SNORD92-201ENST00000585078 85 ntBASIC0.66□□□□□ -2.3
MTHFRP42898 AC008608.1-201ENST00000603910 127 ntBASIC0.66□□□□□ -2.3
MTHFRP42898 Y_RNA.42-201ENST00000362660 108 ntBASIC0.65□□□□□ -2.31
MTHFRP42898 SNORD114-10-201ENST00000363409 72 ntBASIC0.65□□□□□ -2.31
MTHFRP42898 Y_RNA.258-201ENST00000364613 105 ntBASIC0.65□□□□□ -2.31
MTHFRP42898 Y_RNA.344-201ENST00000365381 112 ntBASIC0.65□□□□□ -2.31
MTHFRP42898 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
MTHFRP42898 RNU6-22P-201ENST00000384355 107 ntBASIC0.65□□□□□ -2.31
MTHFRP42898 MIR206-201ENST00000384872 86 ntBASIC0.65□□□□□ -2.31
MTHFRP42898 MIR548D2-201ENST00000384955 97 ntBASIC0.65□□□□□ -2.31
MTHFRP42898 RNA5SP121-201ENST00000516537 101 ntBASIC0.65□□□□□ -2.31
MTHFRP42898 MIR4491-201ENST00000581087 68 ntBASIC0.65□□□□□ -2.31
MTHFRP42898 AL109933.3-201ENST00000619095 188 ntBASIC0.65□□□□□ -2.31
MTHFRP42898 MIR5087-201ENST00000635826 76 ntBASIC0.65□□□□□ -2.31
MTHFRP42898 MIR1255B1-201ENST00000636325 63 ntBASIC0.65□□□□□ -2.31
MTHFRP42898 Y_RNA.346-201ENST00000365385 112 ntBASIC0.64□□□□□ -2.31
MTHFRP42898 SNORA36.2-201ENST00000384004 127 ntBASIC0.64□□□□□ -2.31
MTHFRP42898 MIR573-201ENST00000384964 99 ntBASIC0.64□□□□□ -2.31
MTHFRP42898 RNU6-1168P-201ENST00000390831 104 ntBASIC0.64□□□□□ -2.31
MTHFRP42898 MIR938-201ENST00000401216 83 ntBASIC0.64□□□□□ -2.31
MTHFRP42898 SNORD93-201ENST00000408813 74 ntBASIC0.64□□□□□ -2.31
MTHFRP42898 AL353813.1-201ENST00000440700 253 ntBASIC0.64□□□□□ -2.31
MTHFRP42898 AC008267.6-201ENST00000441664 139 ntBASIC0.64□□□□□ -2.31
MTHFRP42898 AC138749.4-201ENST00000563970 127 ntBASIC0.64□□□□□ -2.31
MTHFRP42898 AC105081.1-201ENST00000617727 106 ntBASIC0.64□□□□□ -2.31
MTHFRP42898 AL035470.1-201ENST00000622571 220 ntBASIC0.64□□□□□ -2.31
MTHFRP42898 RNY1P8-201ENST00000383970 114 ntBASIC0.63□□□□□ -2.31
MTHFRP42898 RNU6-1117P-201ENST00000384525 104 ntBASIC0.63□□□□□ -2.31
MTHFRP42898 RNU6-1321P-201ENST00000390905 107 ntBASIC0.63□□□□□ -2.31
MTHFRP42898 SNORD77B-201ENST00000391112 67 ntBASIC0.63□□□□□ -2.31
MTHFRP42898 RNU4-83P-201ENST00000410863 133 ntBASIC0.63□□□□□ -2.31
MTHFRP42898 RNU7-102P-201ENST00000458948 62 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 214.1 ms