Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNY4P3-201ENST00000365254 95 ntBASIC-0.65□□□□□ -2.51
RFC3P40938 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.65□□□□□ -2.51
RFC3P40938 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.65□□□□□ -2.51
RFC3P40938 MIR599-201ENST00000385069 95 ntBASIC-0.65□□□□□ -2.51
RFC3P40938 MIR516B1-201ENST00000385211 90 ntBASIC-0.65□□□□□ -2.51
RFC3P40938 RNU6-651P-201ENST00000411040 105 ntBASIC-0.65□□□□□ -2.51
RFC3P40938 AC097635.1-201ENST00000450678 155 ntBASIC-0.65□□□□□ -2.51
RFC3P40938 AC074198.2-201ENST00000508153 258 ntBASIC-0.65□□□□□ -2.51
RFC3P40938 AL365265.1-201ENST00000621045 234 ntBASIC-0.65□□□□□ -2.51
RFC3P40938 RNU4-17P-201ENST00000365598 141 ntBASIC-0.66□□□□□ -2.52
RFC3P40938 RNU6-811P-201ENST00000384069 107 ntBASIC-0.66□□□□□ -2.52
RFC3P40938 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.66□□□□□ -2.52
RFC3P40938 AC244250.2-201ENST00000418731 148 ntBASIC-0.66□□□□□ -2.52
RFC3P40938 MTND5P20-201ENST00000448677 143 ntBASIC-0.66□□□□□ -2.52
RFC3P40938 MTND5P22-201ENST00000458380 195 ntBASIC-0.66□□□□□ -2.52
RFC3P40938 RNU6-988P-201ENST00000519081 107 ntBASIC-0.66□□□□□ -2.52
RFC3P40938 AC006504.6-201ENST00000590142 199 ntBASIC-0.66□□□□□ -2.52
RFC3P40938 RNU6-865P-201ENST00000364772 107 ntBASIC-0.67□□□□□ -2.52
RFC3P40938 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.67□□□□□ -2.52
RFC3P40938 RNU4-63P-201ENST00000411313 118 ntBASIC-0.67□□□□□ -2.52
RFC3P40938 TRAJ51-201ENST00000504127 63 ntBASIC-0.67□□□□□ -2.52
RFC3P40938 AC113195.1-201ENST00000579952 141 ntBASIC-0.67□□□□□ -2.52
RFC3P40938 MIR4432-201ENST00000581823 84 ntBASIC-0.67□□□□□ -2.52
RFC3P40938 MIR548AE2-201ENST00000583456 67 ntBASIC-0.67□□□□□ -2.52
RFC3P40938 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.68□□□□□ -2.52
RFC3P40938 AL121914.1-201ENST00000450188 156 ntBASIC-0.68□□□□□ -2.52
RFC3P40938 AP001328.1-201ENST00000528550 176 ntBASIC-0.68□□□□□ -2.52
RFC3P40938 AL442663.2-201ENST00000554385 511 ntBASIC-0.68□□□□□ -2.52
RFC3P40938 MIR4282-201ENST00000583613 67 ntBASIC-0.68□□□□□ -2.52
RFC3P40938 MIR6507-201ENST00000613630 70 ntBASIC-0.68□□□□□ -2.52
RFC3P40938 MIR655-201ENST00000362159 97 ntBASIC-0.69□□□□□ -2.52
RFC3P40938 U8.6-201ENST00000364939 135 ntBASIC-0.69□□□□□ -2.52
RFC3P40938 MT-TD-201ENST00000387419 68 ntBASIC-0.69□□□□□ -2.52
RFC3P40938 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.69□□□□□ -2.52
RFC3P40938 MIR3920-201ENST00000581751 86 ntBASIC-0.69□□□□□ -2.52
RFC3P40938 U2.14-201ENST00000615943 113 ntBASIC-0.69□□□□□ -2.52
RFC3P40938 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.7□□□□□ -2.52
RFC3P40938 RNA5SP205-201ENST00000364653 136 ntBASIC-0.7□□□□□ -2.52
RFC3P40938 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.7□□□□□ -2.52
RFC3P40938 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.7□□□□□ -2.52
RFC3P40938 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.7□□□□□ -2.52
RFC3P40938 RNU7-74P-201ENST00000459104 62 ntBASIC-0.7□□□□□ -2.52
RFC3P40938 MIR4744-201ENST00000581563 82 ntBASIC-0.7□□□□□ -2.52
RFC3P40938 AL590491.3-201ENST00000610731 82 ntBASIC-0.7□□□□□ -2.52
RFC3P40938 SNORA25.7-201ENST00000364375 127 ntBASIC-0.71□□□□□ -2.52
RFC3P40938 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.71□□□□□ -2.52
RFC3P40938 MIR519A1-201ENST00000385257 85 ntBASIC-0.71□□□□□ -2.52
RFC3P40938 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.72□□□□□ -2.52
RFC3P40938 RNU6-474P-201ENST00000384243 107 ntBASIC-0.72□□□□□ -2.52
RFC3P40938 MT-TQ-201ENST00000387372 72 ntBASIC-0.72□□□□□ -2.52
RFC3P40938 MIR548I2-201ENST00000408348 149 ntBASIC-0.72□□□□□ -2.52
RFC3P40938 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.72□□□□□ -2.52
RFC3P40938 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.72□□□□□ -2.52
RFC3P40938 MIR4500-201ENST00000579472 76 ntBASIC-0.72□□□□□ -2.52
RFC3P40938 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.72□□□□□ -2.53
RFC3P40938 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.73□□□□□ -2.53
RFC3P40938 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.73□□□□□ -2.53
RFC3P40938 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.73□□□□□ -2.53
RFC3P40938 RNU7-13P-201ENST00000516413 62 ntBASIC-0.73□□□□□ -2.53
RFC3P40938 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.74□□□□□ -2.53
RFC3P40938 RNU1-141P-201ENST00000364623 158 ntBASIC-0.74□□□□□ -2.53
RFC3P40938 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.75□□□□□ -2.53
RFC3P40938 SNORD114-15-201ENST00000364687 72 ntBASIC-0.75□□□□□ -2.53
RFC3P40938 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.75□□□□□ -2.53
RFC3P40938 MIR196A1-201ENST00000388006 70 ntBASIC-0.75□□□□□ -2.53
RFC3P40938 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
RFC3P40938 RNU6-578P-201ENST00000390980 103 ntBASIC-0.75□□□□□ -2.53
RFC3P40938 RNU7-48P-201ENST00000458875 63 ntBASIC-0.75□□□□□ -2.53
RFC3P40938 RNU7-188P-201ENST00000517063 64 ntBASIC-0.75□□□□□ -2.53
RFC3P40938 MIR4473-201ENST00000583731 91 ntBASIC-0.75□□□□□ -2.53
RFC3P40938 MIR335-201ENST00000362173 94 ntBASIC-0.76□□□□□ -2.53
RFC3P40938 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.76□□□□□ -2.53
RFC3P40938 RNU6-690P-201ENST00000365242 106 ntBASIC-0.76□□□□□ -2.53
RFC3P40938 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.76□□□□□ -2.53
RFC3P40938 RNU6-30P-201ENST00000384561 107 ntBASIC-0.76□□□□□ -2.53
RFC3P40938 SNORA3B-201ENST00000391305 131 ntBASIC-0.76□□□□□ -2.53
RFC3P40938 snoU13.19-201ENST00000459148 104 ntBASIC-0.76□□□□□ -2.53
RFC3P40938 MIR1270-201ENST00000459320 83 ntBASIC-0.76□□□□□ -2.53
RFC3P40938 RNU6-138P-201ENST00000515952 107 ntBASIC-0.76□□□□□ -2.53
RFC3P40938 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.76□□□□□ -2.53
RFC3P40938 RNA5SP236-201ENST00000516169 116 ntBASIC-0.76□□□□□ -2.53
RFC3P40938 RNU2-35P-201ENST00000516446 142 ntBASIC-0.76□□□□□ -2.53
RFC3P40938 MTND5P40-201ENST00000559945 246 ntBASIC-0.76□□□□□ -2.53
RFC3P40938 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.77□□□□□ -2.53
RFC3P40938 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.77□□□□□ -2.53
RFC3P40938 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.77□□□□□ -2.53
RFC3P40938 RNU6-643P-201ENST00000384018 107 ntBASIC-0.77□□□□□ -2.53
RFC3P40938 RNY1P7-201ENST00000384743 110 ntBASIC-0.77□□□□□ -2.53
RFC3P40938 MIR4680-201ENST00000580906 66 ntBASIC-0.77□□□□□ -2.53
RFC3P40938 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.77□□□□□ -2.53
RFC3P40938 AC011603.4-201ENST00000611325 277 ntBASIC-0.77□□□□□ -2.53
RFC3P40938 SNORD114-14-201ENST00000362723 75 ntBASIC-0.78□□□□□ -2.53
RFC3P40938 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.78□□□□□ -2.53
RFC3P40938 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.78□□□□□ -2.53
RFC3P40938 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.78□□□□□ -2.53
RFC3P40938 MIR181B2-201ENST00000385004 89 ntBASIC-0.78□□□□□ -2.53
RFC3P40938 AL603914.1-201ENST00000401964 204 ntBASIC-0.78□□□□□ -2.53
RFC3P40938 SNORD63B-201ENST00000411005 70 ntBASIC-0.78□□□□□ -2.53
RFC3P40938 RNU7-195P-201ENST00000458793 62 ntBASIC-0.78□□□□□ -2.53
RFC3P40938 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms