Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AC021443.1-201ENST00000604478 211 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 MIR3666-201ENST00000607845 111 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 MTND4P29-201ENST00000503122 1372 ntBASIC-0.38□□□□□ -2.47
BRCA1P38398 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.38□□□□□ -2.47
BRCA1P38398 MIR106A-201ENST00000384870 81 ntBASIC-0.38□□□□□ -2.47
BRCA1P38398 MIR206-201ENST00000384872 86 ntBASIC-0.38□□□□□ -2.47
BRCA1P38398 MIR1270-201ENST00000459320 83 ntBASIC-0.38□□□□□ -2.47
BRCA1P38398 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.39□□□□□ -2.47
BRCA1P38398 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.39□□□□□ -2.47
BRCA1P38398 SNORD14C-201ENST00000365382 88 ntBASIC-0.39□□□□□ -2.47
BRCA1P38398 RNU6-578P-201ENST00000390980 103 ntBASIC-0.39□□□□□ -2.47
BRCA1P38398 MIR4263-201ENST00000584745 83 ntBASIC-0.39□□□□□ -2.47
BRCA1P38398 U7.6-201ENST00000610841 64 ntBASIC-0.39□□□□□ -2.47
BRCA1P38398 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.39□□□□□ -2.47
BRCA1P38398 RNY1P2-201ENST00000364820 117 ntBASIC-0.39□□□□□ -2.47
BRCA1P38398 RNA5SP300-201ENST00000391197 107 ntBASIC-0.39□□□□□ -2.47
BRCA1P38398 MIR548P-201ENST00000408336 84 ntBASIC-0.39□□□□□ -2.47
BRCA1P38398 RNA5SP144-201ENST00000410846 116 ntBASIC-0.39□□□□□ -2.47
BRCA1P38398 RNU6-635P-201ENST00000516651 102 ntBASIC-0.39□□□□□ -2.47
BRCA1P38398 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.39□□□□□ -2.47
BRCA1P38398 MIR4680-201ENST00000580906 66 ntBASIC-0.39□□□□□ -2.47
BRCA1P38398 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.4□□□□□ -2.47
BRCA1P38398 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.4□□□□□ -2.47
BRCA1P38398 MIR617-201ENST00000385030 97 ntBASIC-0.4□□□□□ -2.47
BRCA1P38398 RNY3P16-201ENST00000516338 101 ntBASIC-0.4□□□□□ -2.47
BRCA1P38398 AC011921.3-201ENST00000605540 361 ntBASIC-0.4□□□□□ -2.47
BRCA1P38398 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.41□□□□□ -2.47
BRCA1P38398 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.41□□□□□ -2.47
BRCA1P38398 RNU6-690P-201ENST00000365242 106 ntBASIC-0.41□□□□□ -2.47
BRCA1P38398 AL121914.1-201ENST00000450188 156 ntBASIC-0.41□□□□□ -2.47
BRCA1P38398 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.41□□□□□ -2.47
BRCA1P38398 RNU6-713P-201ENST00000384761 107 ntBASIC-0.41□□□□□ -2.48
BRCA1P38398 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.41□□□□□ -2.48
BRCA1P38398 RNU7-104P-201ENST00000459398 79 ntBASIC-0.41□□□□□ -2.48
BRCA1P38398 AC138907.4-201ENST00000570107 226 ntBASIC-0.41□□□□□ -2.48
BRCA1P38398 MIR6514-201ENST00000622549 70 ntBASIC-0.41□□□□□ -2.48
BRCA1P38398 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.42□□□□□ -2.48
BRCA1P38398 RNU6-865P-201ENST00000364772 107 ntBASIC-0.42□□□□□ -2.48
BRCA1P38398 RNU2-35P-201ENST00000516446 142 ntBASIC-0.42□□□□□ -2.48
BRCA1P38398 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.43□□□□□ -2.48
BRCA1P38398 SNORA33.2-201ENST00000365413 134 ntBASIC-0.43□□□□□ -2.48
BRCA1P38398 RNU6-472P-201ENST00000384299 107 ntBASIC-0.43□□□□□ -2.48
BRCA1P38398 RNA5SP451-201ENST00000410588 110 ntBASIC-0.43□□□□□ -2.48
BRCA1P38398 AC098479.1-201ENST00000609225 154 ntBASIC-0.43□□□□□ -2.48
BRCA1P38398 AC097635.1-201ENST00000450678 155 ntBASIC-0.44□□□□□ -2.48
BRCA1P38398 RNU7-123P-201ENST00000515911 60 ntBASIC-0.44□□□□□ -2.48
BRCA1P38398 MIR4723-201ENST00000585070 81 ntBASIC-0.44□□□□□ -2.48
BRCA1P38398 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.44□□□□□ -2.48
BRCA1P38398 AC069503.3-201ENST00000618674 145 ntBASIC-0.44□□□□□ -2.48
BRCA1P38398 SNORD115-35-201ENST00000365122 82 ntBASIC-0.44□□□□□ -2.48
BRCA1P38398 MIR1302-6-201ENST00000408466 90 ntBASIC-0.44□□□□□ -2.48
BRCA1P38398 AC082651.2-201ENST00000496833 166 ntBASIC-0.44□□□□□ -2.48
BRCA1P38398 AL359881.1-201ENST00000602916 267 ntBASIC-0.44□□□□□ -2.48
BRCA1P38398 RNU2-4P-201ENST00000606190 192 ntBASIC-0.44□□□□□ -2.48
BRCA1P38398 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.45□□□□□ -2.48
BRCA1P38398 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.45□□□□□ -2.48
BRCA1P38398 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.45□□□□□ -2.48
BRCA1P38398 RNU6-493P-201ENST00000391321 108 ntBASIC-0.45□□□□□ -2.48
BRCA1P38398 RNU7-74P-201ENST00000459104 62 ntBASIC-0.45□□□□□ -2.48
BRCA1P38398 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.45□□□□□ -2.48
BRCA1P38398 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.46□□□□□ -2.48
BRCA1P38398 MIR181B2-201ENST00000385004 89 ntBASIC-0.46□□□□□ -2.48
BRCA1P38398 MT-TW-201ENST00000387382 68 ntBASIC-0.46□□□□□ -2.48
BRCA1P38398 MIR548I2-201ENST00000408348 149 ntBASIC-0.46□□□□□ -2.48
BRCA1P38398 RNU6-240P-201ENST00000516098 97 ntBASIC-0.46□□□□□ -2.48
BRCA1P38398 RNU7-137P-201ENST00000516788 62 ntBASIC-0.46□□□□□ -2.48
BRCA1P38398 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.46□□□□□ -2.48
BRCA1P38398 AL365265.1-201ENST00000621045 234 ntBASIC-0.46□□□□□ -2.48
BRCA1P38398 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.46□□□□□ -2.48
BRCA1P38398 RNU6-768P-201ENST00000384683 107 ntBASIC-0.46□□□□□ -2.48
BRCA1P38398 AC006210.1-201ENST00000424882 111 ntBASIC-0.46□□□□□ -2.48
BRCA1P38398 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.46□□□□□ -2.48
BRCA1P38398 RNA5SP275-201ENST00000363936 118 ntBASIC-0.47□□□□□ -2.48
BRCA1P38398 MIR599-201ENST00000385069 95 ntBASIC-0.47□□□□□ -2.48
BRCA1P38398 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.47□□□□□ -2.48
BRCA1P38398 AL442663.2-201ENST00000554385 511 ntBASIC-0.47□□□□□ -2.48
BRCA1P38398 AC020661.2-201ENST00000560114 134 ntBASIC-0.47□□□□□ -2.48
BRCA1P38398 MIR3920-201ENST00000581751 86 ntBASIC-0.47□□□□□ -2.48
BRCA1P38398 RN7SL660P-201ENST00000614852 299 ntBASIC-0.47□□□□□ -2.48
BRCA1P38398 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 RNU6-238P-201ENST00000363313 106 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 SNORD49B-201ENST00000365172 72 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 RNU6-643P-201ENST00000384018 107 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 AC109327.2-201ENST00000448339 378 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 FTX_2.1-201ENST00000618816 94 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 MTND4LP11-201ENST00000422184 280 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.48□□□□□ -2.49
BRCA1P38398 RNA5SP403-201ENST00000363598 108 ntBASIC-0.49□□□□□ -2.49
BRCA1P38398 RNU6-867P-201ENST00000364956 107 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms