Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNU6-1104P-201ENST00000384723 104 ntBASIC0.33□□□□□ -2.36
HMGCLP35914 MIR216A-201ENST00000385063 110 ntBASIC0.33□□□□□ -2.36
HMGCLP35914 SNORA40.8-201ENST00000411034 126 ntBASIC0.33□□□□□ -2.36
HMGCLP35914 RPL39P25-201ENST00000449384 154 ntBASIC0.33□□□□□ -2.36
HMGCLP35914 RNA5SP47-201ENST00000517230 109 ntBASIC0.33□□□□□ -2.36
HMGCLP35914 IGKV1-22-201ENST00000524313 326 ntBASIC0.33□□□□□ -2.36
HMGCLP35914 AL137067.1-201ENST00000615933 120 ntBASIC0.33□□□□□ -2.36
HMGCLP35914 RNU4-58P-201ENST00000363192 141 ntBASIC0.32□□□□□ -2.36
HMGCLP35914 SNORA32-201ENST00000384072 121 ntBASIC0.32□□□□□ -2.36
HMGCLP35914 Y_RNA.464-201ENST00000384282 110 ntBASIC0.32□□□□□ -2.36
HMGCLP35914 RNU6-804P-201ENST00000384286 107 ntBASIC0.32□□□□□ -2.36
HMGCLP35914 MIR569-201ENST00000385228 96 ntBASIC0.32□□□□□ -2.36
HMGCLP35914 RNU6-460P-201ENST00000391158 108 ntBASIC0.32□□□□□ -2.36
HMGCLP35914 AC108740.1-201ENST00000498629 225 ntBASIC0.32□□□□□ -2.36
HMGCLP35914 RNU6-863P-201ENST00000515989 104 ntBASIC0.32□□□□□ -2.36
HMGCLP35914 MTND5P34-201ENST00000568888 325 ntBASIC0.32□□□□□ -2.36
HMGCLP35914 MIR4639-201ENST00000584938 69 ntBASIC0.32□□□□□ -2.36
HMGCLP35914 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.31□□□□□ -2.36
HMGCLP35914 RNA5SP133-201ENST00000363368 119 ntBASIC0.31□□□□□ -2.36
HMGCLP35914 Y_RNA.398-201ENST00000383952 99 ntBASIC0.31□□□□□ -2.36
HMGCLP35914 SNORD28-201ENST00000384706 75 ntBASIC0.31□□□□□ -2.36
HMGCLP35914 MIR644A-201ENST00000385262 94 ntBASIC0.31□□□□□ -2.36
HMGCLP35914 RNY4P20-201ENST00000516678 93 ntBASIC0.31□□□□□ -2.36
HMGCLP35914 RNU6-531P-201ENST00000516694 104 ntBASIC0.31□□□□□ -2.36
HMGCLP35914 MIR548X2-201ENST00000579776 100 ntBASIC0.31□□□□□ -2.36
HMGCLP35914 Y_RNA.56-201ENST00000362798 112 ntBASIC0.3□□□□□ -2.36
HMGCLP35914 RNU6-915P-201ENST00000364943 103 ntBASIC0.3□□□□□ -2.36
HMGCLP35914 SNORD116-18-201ENST00000383961 92 ntBASIC0.3□□□□□ -2.36
HMGCLP35914 RNU6-429P-201ENST00000384582 108 ntBASIC0.3□□□□□ -2.36
HMGCLP35914 AC108059.2-201ENST00000434626 151 ntBASIC0.3□□□□□ -2.36
HMGCLP35914 AC244505.6-201ENST00000452829 130 ntBASIC0.3□□□□□ -2.36
HMGCLP35914 Y_RNA.692-201ENST00000516627 105 ntBASIC0.3□□□□□ -2.36
HMGCLP35914 Y_RNA.697-201ENST00000516776 113 ntBASIC0.3□□□□□ -2.36
HMGCLP35914 SCARNA16.5-201ENST00000517114 183 ntBASIC0.3□□□□□ -2.36
HMGCLP35914 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.3□□□□□ -2.36
HMGCLP35914 AC022523.2-201ENST00000561045 150 ntBASIC0.3□□□□□ -2.36
HMGCLP35914 Y_RNA.36-201ENST00000362602 112 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 Y_RNA.119-201ENST00000363301 96 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 SNORD114-23-201ENST00000363536 72 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 Y_RNA.150-201ENST00000363562 102 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 Y_RNA.215-201ENST00000364204 112 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 RNA5SP245-201ENST00000364239 121 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 RNU6-1327P-201ENST00000365302 105 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 RNU6-535P-201ENST00000384722 107 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 MIR206-201ENST00000384872 86 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 MIRLET7F2-201ENST00000385277 83 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 MT-TI-201ENST00000387365 69 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 RNU6-1321P-201ENST00000390905 107 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 RNU6-679P-201ENST00000391003 106 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 MTND5P41-201ENST00000517498 206 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 AC087741.2-201ENST00000619415 172 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 U6.109-201ENST00000636749 87 ntBASIC0.29□□□□□ -2.36
HMGCLP35914 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
HMGCLP35914 SNORD115-19-201ENST00000363098 82 ntBASIC0.28□□□□□ -2.36
HMGCLP35914 Y_RNA.114-201ENST00000363265 113 ntBASIC0.28□□□□□ -2.36
HMGCLP35914 SNORD115-18-201ENST00000363293 82 ntBASIC0.28□□□□□ -2.36
HMGCLP35914 SNORD115-17-201ENST00000364612 82 ntBASIC0.28□□□□□ -2.36
HMGCLP35914 Y_RNA.270-201ENST00000364693 104 ntBASIC0.28□□□□□ -2.36
HMGCLP35914 SNORA72.6-201ENST00000384520 129 ntBASIC0.28□□□□□ -2.36
HMGCLP35914 Y_RNA.567-201ENST00000384736 106 ntBASIC0.28□□□□□ -2.36
HMGCLP35914 RNU6-1307P-201ENST00000391012 103 ntBASIC0.28□□□□□ -2.36
HMGCLP35914 RNU6-848P-201ENST00000515948 107 ntBASIC0.28□□□□□ -2.36
HMGCLP35914 RNU6-617P-201ENST00000516147 107 ntBASIC0.28□□□□□ -2.36
HMGCLP35914 RNU6-473P-201ENST00000516164 107 ntBASIC0.28□□□□□ -2.36
HMGCLP35914 RNU6-1049P-201ENST00000516414 107 ntBASIC0.28□□□□□ -2.36
HMGCLP35914 Y_RNA.127-201ENST00000363386 109 ntBASIC0.27□□□□□ -2.37
HMGCLP35914 Y_RNA.420-201ENST00000384043 110 ntBASIC0.27□□□□□ -2.37
HMGCLP35914 MIR513C-201ENST00000401352 84 ntBASIC0.27□□□□□ -2.37
HMGCLP35914 SNORA25.12-201ENST00000516202 82 ntBASIC0.27□□□□□ -2.37
HMGCLP35914 RNU6-469P-201ENST00000516253 101 ntBASIC0.27□□□□□ -2.37
HMGCLP35914 SNORA62.5-201ENST00000516634 120 ntBASIC0.27□□□□□ -2.37
HMGCLP35914 AP001328.1-201ENST00000528550 176 ntBASIC0.27□□□□□ -2.37
HMGCLP35914 MIR3671-201ENST00000580455 88 ntBASIC0.27□□□□□ -2.37
HMGCLP35914 AC021753.1-201ENST00000635724 168 ntBASIC0.27□□□□□ -2.37
HMGCLP35914 Y_RNA.170-201ENST00000363746 110 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 RNU6-647P-201ENST00000364243 107 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 SNORD115-35-201ENST00000365122 82 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 RNY1P5-201ENST00000383890 115 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 RNU6-1126P-201ENST00000384002 107 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 MIR519A1-201ENST00000385257 85 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 RNA5SP136-201ENST00000410906 107 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 SNORD71-201ENST00000411292 86 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 AL158147.1-201ENST00000443970 75 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 RNU7-48P-201ENST00000458875 63 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 RN7SKP19-201ENST00000516016 252 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 RNU7-2P-201ENST00000516096 62 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 RNU7-200P-201ENST00000516105 62 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 RNA5SP268-201ENST00000516828 124 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 SNORA25.18-201ENST00000607153 114 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 U7.2-201ENST00000607576 63 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 MIR7107-201ENST00000611489 80 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 AC010487.4-201ENST00000637027 61 ntBASIC0.26□□□□□ -2.37
HMGCLP35914 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.26□□□□□ -2.37
HMGCLP35914 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
HMGCLP35914 Y_RNA.98-201ENST00000363109 102 ntBASIC0.25□□□□□ -2.37
HMGCLP35914 SNORD77B-201ENST00000391112 67 ntBASIC0.25□□□□□ -2.37
HMGCLP35914 RNU2-59P-201ENST00000410482 191 ntBASIC0.25□□□□□ -2.37
HMGCLP35914 SNRPGP12-201ENST00000449481 213 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms