Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNU6-994P-201ENST00000410507 111 ntBASIC1.25□□□□□ -2.21
SLC6A4P31645 AC067940.1-201ENST00000458411 300 ntBASIC1.25□□□□□ -2.21
SLC6A4P31645 PDCD5P2-201ENST00000507570 312 ntBASIC1.25□□□□□ -2.21
SLC6A4P31645 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.25□□□□□ -2.21
SLC6A4P31645 AC023827.1-201ENST00000569247 97 ntBASIC1.25□□□□□ -2.21
SLC6A4P31645 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.25□□□□□ -2.21
SLC6A4P31645 AC027335.2-201ENST00000624030 375 ntBASIC1.25□□□□□ -2.21
SLC6A4P31645 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
SLC6A4P31645 Y_RNA.163-201ENST00000363702 113 ntBASIC1.24□□□□□ -2.21
SLC6A4P31645 RNY1P2-201ENST00000364820 117 ntBASIC1.24□□□□□ -2.21
SLC6A4P31645 Y_RNA.448-201ENST00000384185 108 ntBASIC1.24□□□□□ -2.21
SLC6A4P31645 MIR19B1-201ENST00000384829 87 ntBASIC1.24□□□□□ -2.21
SLC6A4P31645 MIR1257-201ENST00000408490 117 ntBASIC1.24□□□□□ -2.21
SLC6A4P31645 AC002429.1-201ENST00000437672 148 ntBASIC1.24□□□□□ -2.21
SLC6A4P31645 RNU7-48P-201ENST00000458875 63 ntBASIC1.24□□□□□ -2.21
SLC6A4P31645 MIR4694-201ENST00000578534 80 ntBASIC1.24□□□□□ -2.21
SLC6A4P31645 MIR6515-201ENST00000619843 57 ntBASIC1.24□□□□□ -2.21
SLC6A4P31645 Y_RNA.10-201ENST00000362371 110 ntBASIC1.23□□□□□ -2.21
SLC6A4P31645 RNU6-1313P-201ENST00000362622 102 ntBASIC1.23□□□□□ -2.21
SLC6A4P31645 Y_RNA.78-201ENST00000362970 110 ntBASIC1.23□□□□□ -2.21
SLC6A4P31645 RNU1-93P-201ENST00000364704 169 ntBASIC1.23□□□□□ -2.21
SLC6A4P31645 Y_RNA.328-201ENST00000365208 113 ntBASIC1.23□□□□□ -2.21
SLC6A4P31645 RNU6-1321P-201ENST00000390905 107 ntBASIC1.23□□□□□ -2.21
SLC6A4P31645 U8.15-201ENST00000390947 134 ntBASIC1.23□□□□□ -2.21
SLC6A4P31645 SNORA7.5-201ENST00000410672 110 ntBASIC1.23□□□□□ -2.21
SLC6A4P31645 uc_338.6-201ENST00000613544 171 ntBASIC1.23□□□□□ -2.21
SLC6A4P31645 MIR96-201ENST00000362288 78 ntBASIC1.22□□□□□ -2.21
SLC6A4P31645 Y_RNA.360-201ENST00000365512 102 ntBASIC1.22□□□□□ -2.21
SLC6A4P31645 Y_RNA.377-201ENST00000365644 108 ntBASIC1.22□□□□□ -2.21
SLC6A4P31645 RNU6-106P-201ENST00000384405 107 ntBASIC1.22□□□□□ -2.21
SLC6A4P31645 SNORD38.2-201ENST00000384470 69 ntBASIC1.22□□□□□ -2.21
SLC6A4P31645 SNORD93-201ENST00000408813 74 ntBASIC1.22□□□□□ -2.21
SLC6A4P31645 RPS26P5-201ENST00000418544 335 ntBASIC1.22□□□□□ -2.21
SLC6A4P31645 AL031737.1-201ENST00000450125 223 ntBASIC1.22□□□□□ -2.21
SLC6A4P31645 RNU7-185P-201ENST00000459215 60 ntBASIC1.22□□□□□ -2.21
SLC6A4P31645 AP001362.1-201ENST00000625165 124 ntBASIC1.22□□□□□ -2.21
SLC6A4P31645 AL512310.12-203ENST00000640543 90 ntBASIC1.22□□□□□ -2.21
SLC6A4P31645 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
SLC6A4P31645 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SLC6A4P31645 AC023934.1-201ENST00000574529 2389 ntBASIC1.21□□□□□ -2.22
SLC6A4P31645 RNY3P2-201ENST00000362918 102 ntBASIC1.21□□□□□ -2.22
SLC6A4P31645 RNU4-36P-201ENST00000364294 144 ntBASIC1.21□□□□□ -2.22
SLC6A4P31645 RNU1-36P-201ENST00000365130 165 ntBASIC1.21□□□□□ -2.22
SLC6A4P31645 MIR200A-201ENST00000384875 90 ntBASIC1.21□□□□□ -2.22
SLC6A4P31645 MIR150-201ENST00000385048 84 ntBASIC1.21□□□□□ -2.22
SLC6A4P31645 RNU6-679P-201ENST00000391003 106 ntBASIC1.21□□□□□ -2.22
SLC6A4P31645 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.21□□□□□ -2.22
SLC6A4P31645 MTATP6P29-201ENST00000415057 132 ntBASIC1.21□□□□□ -2.22
SLC6A4P31645 FABP5P4-201ENST00000437203 171 ntBASIC1.21□□□□□ -2.22
SLC6A4P31645 RNU6-1223P-201ENST00000517124 104 ntBASIC1.21□□□□□ -2.22
SLC6A4P31645 MIR4771-2-201ENST00000577758 74 ntBASIC1.21□□□□□ -2.22
SLC6A4P31645 MIR4771-1-201ENST00000582617 74 ntBASIC1.21□□□□□ -2.22
SLC6A4P31645 AC096720.1-201ENST00000604441 183 ntBASIC1.21□□□□□ -2.22
SLC6A4P31645 uc_338.28-201ENST00000612082 187 ntBASIC1.21□□□□□ -2.22
SLC6A4P31645 AC105081.1-201ENST00000617727 106 ntBASIC1.21□□□□□ -2.22
SLC6A4P31645 RNU6-554P-201ENST00000410466 106 ntBASIC1.2□□□□□ -2.22
SLC6A4P31645 SNORD83.1-201ENST00000411362 77 ntBASIC1.2□□□□□ -2.22
SLC6A4P31645 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
SLC6A4P31645 AC141557.1-201ENST00000540982 400 ntBASIC1.2□□□□□ -2.22
SLC6A4P31645 AL136317.1-201ENST00000612653 226 ntBASIC1.2□□□□□ -2.22
SLC6A4P31645 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
SLC6A4P31645 MIR1-1-201ENST00000362147 71 ntBASIC1.19□□□□□ -2.22
SLC6A4P31645 RNU6-766P-201ENST00000362478 107 ntBASIC1.19□□□□□ -2.22
SLC6A4P31645 SNORA63.4-201ENST00000362763 126 ntBASIC1.19□□□□□ -2.22
SLC6A4P31645 MIR125B2-201ENST00000385128 89 ntBASIC1.19□□□□□ -2.22
SLC6A4P31645 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.19□□□□□ -2.22
SLC6A4P31645 snoU13.21-201ENST00000459368 105 ntBASIC1.19□□□□□ -2.22
SLC6A4P31645 MIR151B-201ENST00000584249 96 ntBASIC1.19□□□□□ -2.22
SLC6A4P31645 AL442128.1-201ENST00000615151 90 ntBASIC1.19□□□□□ -2.22
SLC6A4P31645 RNU6-832P-201ENST00000363319 107 ntBASIC1.18□□□□□ -2.22
SLC6A4P31645 RNU6-1099P-201ENST00000363533 107 ntBASIC1.18□□□□□ -2.22
SLC6A4P31645 RNU1-124P-201ENST00000363861 145 ntBASIC1.18□□□□□ -2.22
SLC6A4P31645 RNU6-1201P-201ENST00000384227 107 ntBASIC1.18□□□□□ -2.22
SLC6A4P31645 MIR598-201ENST00000384868 97 ntBASIC1.18□□□□□ -2.22
SLC6A4P31645 MIR605-201ENST00000385078 83 ntBASIC1.18□□□□□ -2.22
SLC6A4P31645 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
SLC6A4P31645 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.18□□□□□ -2.22
SLC6A4P31645 RNU6-1194P-201ENST00000516208 104 ntBASIC1.18□□□□□ -2.22
SLC6A4P31645 DEFB131E-201ENST00000532329 154 ntBASIC1.18□□□□□ -2.22
SLC6A4P31645 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.18□□□□□ -2.22
SLC6A4P31645 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SLC6A4P31645 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
SLC6A4P31645 RNU4-58P-201ENST00000363192 141 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 SNORD38.1-201ENST00000363863 68 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 RNU6-756P-201ENST00000383997 107 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 SNORA51.5-201ENST00000384126 131 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 RNU6-939P-201ENST00000384634 107 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 MIR520E-201ENST00000384867 87 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 MIR577-201ENST00000385196 96 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 MIR100-201ENST00000385259 80 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 MIR1827-201ENST00000408549 66 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 RNU4-83P-201ENST00000410863 133 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 AC096949.1-201ENST00000412047 152 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 AL353813.1-201ENST00000440700 253 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 AC138749.4-201ENST00000563970 127 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 MIR4491-201ENST00000581087 68 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 MIR376B-201ENST00000614515 100 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 MIR6788-201ENST00000618842 66 ntBASIC1.17□□□□□ -2.22
SLC6A4P31645 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms