Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 SUMO1P3-201ENST00000439961 304 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 RNU7-56P-201ENST00000458744 62 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 RNU7-185P-201ENST00000459215 60 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 U7.7-201ENST00000459276 60 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 RNU7-45P-201ENST00000459460 63 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 PSMC1P5-201ENST00000512850 177 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 MIR4491-201ENST00000581087 68 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 AC106800.4-201ENST00000614905 153 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 RNU6-369P-201ENST00000362515 102 ntBASIC0.44□□□□□ -2.34
COL5A1P20908 SNORD114-10-201ENST00000363409 72 ntBASIC0.44□□□□□ -2.34
COL5A1P20908 MIR206-201ENST00000384872 86 ntBASIC0.44□□□□□ -2.34
COL5A1P20908 RNU1-119P-201ENST00000391122 165 ntBASIC0.44□□□□□ -2.34
COL5A1P20908 RNA5SP299-201ENST00000391203 116 ntBASIC0.44□□□□□ -2.34
COL5A1P20908 MIR548I2-201ENST00000408348 149 ntBASIC0.44□□□□□ -2.34
COL5A1P20908 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.44□□□□□ -2.34
COL5A1P20908 RNA5SP237-201ENST00000410414 113 ntBASIC0.44□□□□□ -2.34
COL5A1P20908 RNU2-51P-201ENST00000410708 197 ntBASIC0.44□□□□□ -2.34
COL5A1P20908 RNU6-1190P-201ENST00000410811 104 ntBASIC0.44□□□□□ -2.34
COL5A1P20908 BX276092.1-201ENST00000427368 251 ntBASIC0.44□□□□□ -2.34
COL5A1P20908 SNORD67.1-201ENST00000516618 108 ntBASIC0.44□□□□□ -2.34
COL5A1P20908 MIR2115-201ENST00000516657 100 ntBASIC0.44□□□□□ -2.34
COL5A1P20908 RNU6-971P-201ENST00000516920 106 ntBASIC0.44□□□□□ -2.34
COL5A1P20908 RNU6-448P-201ENST00000517052 107 ntBASIC0.44□□□□□ -2.34
COL5A1P20908 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
COL5A1P20908 RNU6-235P-201ENST00000362644 107 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 Y_RNA.114-201ENST00000363265 113 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RNY1P11-201ENST00000363759 113 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 Y_RNA.171-201ENST00000363760 102 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 SNORA2A-201ENST00000383885 135 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 Y_RNA.507-201ENST00000384500 99 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 AC096949.1-201ENST00000412047 152 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RPS26P5-201ENST00000418544 335 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 MTATP6P21-201ENST00000440681 189 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RNU7-164P-201ENST00000459221 62 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 COX6CP6-201ENST00000490840 228 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RNU7-79P-201ENST00000516082 62 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.43□□□□□ -2.34
COL5A1P20908 AC132825.6-201ENST00000638861 357 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 Y_RNA.42-201ENST00000362660 108 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 SNORA63.5-201ENST00000363548 123 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 Y_RNA.298-201ENST00000364960 107 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 SNORD115-35-201ENST00000365122 82 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 Y_RNA.360-201ENST00000365512 102 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 MIR520F-201ENST00000384824 87 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 SNORD12-201ENST00000391002 90 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RNU6-447P-201ENST00000410293 104 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RNU6-1118P-201ENST00000410382 104 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RNU6-1076P-201ENST00000410397 104 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RNU6-355P-201ENST00000410427 104 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RNU6-791P-201ENST00000410467 104 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RNU6-705P-201ENST00000410601 104 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RNU6-1100P-201ENST00000410691 104 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RNU6-860P-201ENST00000410860 104 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RNU6-1217P-201ENST00000411276 104 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RNU6-785P-201ENST00000411324 104 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 FABP5P4-201ENST00000437203 171 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RNU7-102P-201ENST00000458948 62 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 ACA64.5-201ENST00000516207 127 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RNU6-62P-201ENST00000516526 102 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 AC025166.1-201ENST00000612411 163 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 U6.90-201ENST00000614007 104 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 U6.70-201ENST00000620287 104 ntBASIC0.43□□□□□ -2.34
COL5A1P20908 RNA5SP327-201ENST00000362494 101 ntBASIC0.42□□□□□ -2.34
COL5A1P20908 RNU4-58P-201ENST00000363192 141 ntBASIC0.42□□□□□ -2.34
COL5A1P20908 RNU6-1117P-201ENST00000384525 104 ntBASIC0.42□□□□□ -2.34
COL5A1P20908 RNU6-1104P-201ENST00000384723 104 ntBASIC0.42□□□□□ -2.34
COL5A1P20908 RNU6-1165P-201ENST00000410119 107 ntBASIC0.42□□□□□ -2.34
COL5A1P20908 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.42□□□□□ -2.34
COL5A1P20908 AC008267.6-201ENST00000441664 139 ntBASIC0.42□□□□□ -2.34
COL5A1P20908 SNORD124-201ENST00000459577 104 ntBASIC0.42□□□□□ -2.34
COL5A1P20908 RNU6-1194P-201ENST00000516208 104 ntBASIC0.42□□□□□ -2.34
COL5A1P20908 RNU6-406P-201ENST00000516470 107 ntBASIC0.42□□□□□ -2.34
COL5A1P20908 AC138749.4-201ENST00000563970 127 ntBASIC0.42□□□□□ -2.34
COL5A1P20908 AC023827.1-201ENST00000569247 97 ntBASIC0.42□□□□□ -2.34
COL5A1P20908 AC025627.3-201ENST00000582078 182 ntBASIC0.42□□□□□ -2.34
COL5A1P20908 SNORD92-201ENST00000585078 85 ntBASIC0.42□□□□□ -2.34
COL5A1P20908 AL359881.1-201ENST00000602916 267 ntBASIC0.42□□□□□ -2.34
COL5A1P20908 MIR6718-201ENST00000616153 80 ntBASIC0.42□□□□□ -2.34
COL5A1P20908 MIR6841-201ENST00000637129 72 ntBASIC0.42□□□□□ -2.34
COL5A1P20908 SNORA22.1-201ENST00000362701 134 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 SNORD115-19-201ENST00000363098 82 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 SNORD115-18-201ENST00000363293 82 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 Y_RNA.198-201ENST00000364013 98 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 SNORD115-17-201ENST00000364612 82 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 RNU6-1325P-201ENST00000364905 105 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 SNORD58C-201ENST00000365223 64 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 RNU6-1081P-201ENST00000384537 107 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 MIR520H-201ENST00000385126 88 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 MIRLET7F2-201ENST00000385277 83 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 SNORD12C-201ENST00000386307 89 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 SNORD105-201ENST00000386910 85 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 Y_RNA.586-201ENST00000391146 98 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 SNORD93-201ENST00000408813 74 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 RNU6-994P-201ENST00000410507 111 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 RNU4-69P-201ENST00000410677 143 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 Y_RNA.629-201ENST00000411368 105 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 RNU7-48P-201ENST00000458875 63 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 MIR6129-201ENST00000616087 109 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 AC087741.2-201ENST00000619415 172 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms