Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC079804.2-201ENST00000490376 200 ntBASIC2.12□□□□□ -2.07
NFKB1P19838 RNU1-41P-201ENST00000516161 162 ntBASIC2.12□□□□□ -2.07
NFKB1P19838 RNU1-48P-201ENST00000516400 162 ntBASIC2.12□□□□□ -2.07
NFKB1P19838 MIR4491-201ENST00000581087 68 ntBASIC2.12□□□□□ -2.07
NFKB1P19838 RNU4-58P-201ENST00000363192 141 ntBASIC2.11□□□□□ -2.07
NFKB1P19838 RNA5SP160-201ENST00000364866 120 ntBASIC2.11□□□□□ -2.07
NFKB1P19838 RNU6-53P-201ENST00000365367 106 ntBASIC2.11□□□□□ -2.07
NFKB1P19838 SNORA64-201ENST00000384674 134 ntBASIC2.11□□□□□ -2.07
NFKB1P19838 RNU6-243P-201ENST00000391140 107 ntBASIC2.11□□□□□ -2.07
NFKB1P19838 MIR18B-201ENST00000454574 71 ntBASIC2.11□□□□□ -2.07
NFKB1P19838 RNU6-531P-201ENST00000516694 104 ntBASIC2.11□□□□□ -2.07
NFKB1P19838 SNORA25.16-201ENST00000516741 121 ntBASIC2.11□□□□□ -2.07
NFKB1P19838 MIR1273D-201ENST00000577266 86 ntBASIC2.11□□□□□ -2.07
NFKB1P19838 MIR4536-1-201ENST00000583537 88 ntBASIC2.11□□□□□ -2.07
NFKB1P19838 U7.4-201ENST00000614961 63 ntBASIC2.11□□□□□ -2.07
NFKB1P19838 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
NFKB1P19838 RNU6-1094P-201ENST00000362416 104 ntBASIC2.1□□□□□ -2.07
NFKB1P19838 RNA5SP99-201ENST00000364020 114 ntBASIC2.1□□□□□ -2.07
NFKB1P19838 Y_RNA.283-201ENST00000364798 112 ntBASIC2.1□□□□□ -2.07
NFKB1P19838 Y_RNA.565-201ENST00000384719 101 ntBASIC2.1□□□□□ -2.07
NFKB1P19838 RNA5SP95-201ENST00000410319 137 ntBASIC2.1□□□□□ -2.07
NFKB1P19838 RN7SKP223-201ENST00000410582 62 ntBASIC2.1□□□□□ -2.07
NFKB1P19838 RNU6-717P-201ENST00000459076 104 ntBASIC2.1□□□□□ -2.07
NFKB1P19838 RNU6-75P-201ENST00000515944 104 ntBASIC2.1□□□□□ -2.07
NFKB1P19838 MIR4287-201ENST00000579398 78 ntBASIC2.1□□□□□ -2.07
NFKB1P19838 SNRPGP19-201ENST00000603826 189 ntBASIC2.1□□□□□ -2.07
NFKB1P19838 MIR8063-201ENST00000621930 81 ntBASIC2.1□□□□□ -2.07
NFKB1P19838 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
NFKB1P19838 MIR302D-201ENST00000362275 68 ntBASIC2.09□□□□□ -2.07
NFKB1P19838 SNORA63.2-201ENST00000362603 126 ntBASIC2.09□□□□□ -2.07
NFKB1P19838 SNORA67.3-201ENST00000384366 140 ntBASIC2.09□□□□□ -2.07
NFKB1P19838 RNA5SP292-201ENST00000390974 118 ntBASIC2.09□□□□□ -2.07
NFKB1P19838 SNORD93-201ENST00000408813 74 ntBASIC2.09□□□□□ -2.07
NFKB1P19838 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
NFKB1P19838 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
NFKB1P19838 AC025033.1-201ENST00000463883 194 ntBASIC2.09□□□□□ -2.07
NFKB1P19838 MIR514B-201ENST00000516774 80 ntBASIC2.09□□□□□ -2.07
NFKB1P19838 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NFKB1P19838 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
NFKB1P19838 MIRLET7A1-201ENST00000362295 80 ntBASIC2.08□□□□□ -2.08
NFKB1P19838 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
NFKB1P19838 MIR17-201ENST00000385012 84 ntBASIC2.08□□□□□ -2.08
NFKB1P19838 RNU6-466P-201ENST00000391224 103 ntBASIC2.08□□□□□ -2.08
NFKB1P19838 RNA5SP425-201ENST00000410336 112 ntBASIC2.08□□□□□ -2.08
NFKB1P19838 RNU7-106P-201ENST00000459514 67 ntBASIC2.08□□□□□ -2.08
NFKB1P19838 FGF7P7-201ENST00000514120 227 ntBASIC2.08□□□□□ -2.08
NFKB1P19838 RNU1-40P-201ENST00000516816 164 ntBASIC2.08□□□□□ -2.08
NFKB1P19838 RNU1-97P-201ENST00000516872 164 ntBASIC2.08□□□□□ -2.08
NFKB1P19838 MIR4299-201ENST00000577899 72 ntBASIC2.08□□□□□ -2.08
NFKB1P19838 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
NFKB1P19838 ZNF658B-202ENST00000615961 3375 ntBASIC2.08□□□□□ -2.08
NFKB1P19838 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NFKB1P19838 RNU1-36P-201ENST00000365130 165 ntBASIC2.07□□□□□ -2.08
NFKB1P19838 Y_RNA.545-201ENST00000384652 105 ntBASIC2.07□□□□□ -2.08
NFKB1P19838 MIR764-201ENST00000390811 85 ntBASIC2.07□□□□□ -2.08
NFKB1P19838 SNORD63B-201ENST00000411005 70 ntBASIC2.07□□□□□ -2.08
NFKB1P19838 AL356379.1-201ENST00000414105 126 ntBASIC2.07□□□□□ -2.08
NFKB1P19838 RNU6-1194P-201ENST00000516208 104 ntBASIC2.07□□□□□ -2.08
NFKB1P19838 MIR3064-201ENST00000581130 66 ntBASIC2.07□□□□□ -2.08
NFKB1P19838 SNORD92-201ENST00000585078 85 ntBASIC2.07□□□□□ -2.08
NFKB1P19838 AC104996.3-201ENST00000590718 94 ntBASIC2.07□□□□□ -2.08
NFKB1P19838 AC103810.8-201ENST00000607347 118 ntBASIC2.07□□□□□ -2.08
NFKB1P19838 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.07□□□□□ -2.08
NFKB1P19838 RNU6-686P-201ENST00000364839 107 ntBASIC2.06□□□□□ -2.08
NFKB1P19838 RNU6-132P-201ENST00000383863 107 ntBASIC2.06□□□□□ -2.08
NFKB1P19838 MIR1289-2-201ENST00000408360 111 ntBASIC2.06□□□□□ -2.08
NFKB1P19838 RNA5SP338-201ENST00000410495 85 ntBASIC2.06□□□□□ -2.08
NFKB1P19838 snoU13.9-201ENST00000458927 103 ntBASIC2.06□□□□□ -2.08
NFKB1P19838 Y_RNA.660-201ENST00000516002 120 ntBASIC2.06□□□□□ -2.08
NFKB1P19838 Y_RNA.676-201ENST00000516393 96 ntBASIC2.06□□□□□ -2.08
NFKB1P19838 SNORA18.5-201ENST00000516616 101 ntBASIC2.06□□□□□ -2.08
NFKB1P19838 AP000553.5-201ENST00000641933 54 ntBASIC2.06□□□□□ -2.08
NFKB1P19838 AL359851.1-201ENST00000569460 4997 ntBASIC2.05□□□□□ -2.08
NFKB1P19838 MIR548U-201ENST00000390728 81 ntBASIC2.05□□□□□ -2.08
NFKB1P19838 U8.13-201ENST00000390842 128 ntBASIC2.05□□□□□ -2.08
NFKB1P19838 RNA5SP233-201ENST00000459153 113 ntBASIC2.05□□□□□ -2.08
NFKB1P19838 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.05□□□□□ -2.08
NFKB1P19838 MIR219B-201ENST00000637023 88 ntBASIC2.05□□□□□ -2.08
NFKB1P19838 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
NFKB1P19838 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
NFKB1P19838 SNORD1A-201ENST00000364968 72 ntBASIC2.04□□□□□ -2.08
NFKB1P19838 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
NFKB1P19838 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.04□□□□□ -2.08
NFKB1P19838 SNORD100-201ENST00000408573 76 ntBASIC2.04□□□□□ -2.08
NFKB1P19838 RNU6-380P-201ENST00000410207 107 ntBASIC2.04□□□□□ -2.08
NFKB1P19838 AC108210.2-201ENST00000503681 201 ntBASIC2.04□□□□□ -2.08
NFKB1P19838 MIR5089-201ENST00000580047 84 ntBASIC2.04□□□□□ -2.08
NFKB1P19838 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
NFKB1P19838 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
NFKB1P19838 RNU6-161P-201ENST00000363051 106 ntBASIC2.03□□□□□ -2.08
NFKB1P19838 RNU6-403P-201ENST00000363163 104 ntBASIC2.03□□□□□ -2.08
NFKB1P19838 AL591806.2-201ENST00000433122 173 ntBASIC2.03□□□□□ -2.08
NFKB1P19838 HMGN2P23-201ENST00000456759 269 ntBASIC2.03□□□□□ -2.08
NFKB1P19838 AC019176.1-201ENST00000518519 225 ntBASIC2.03□□□□□ -2.08
NFKB1P19838 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.03□□□□□ -2.08
NFKB1P19838 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.03□□□□□ -2.08
NFKB1P19838 Y_RNA.788-201ENST00000622394 112 ntBASIC2.03□□□□□ -2.08
NFKB1P19838 AL161722.3-201ENST00000605789 2983 ntBASIC2.03□□□□□ -2.08
NFKB1P19838 SNORD33-201ENST00000362761 85 ntBASIC2.02□□□□□ -2.09
NFKB1P19838 RNU6-957P-201ENST00000363652 99 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 325.7 ms