Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNU7-156P-201ENST00000517214 74 ntBASIC1.59□□□□□ -2.15
ERCC3P19447 AC068339.1-201ENST00000526965 141 ntBASIC1.59□□□□□ -2.15
ERCC3P19447 AL136317.1-201ENST00000612653 226 ntBASIC1.59□□□□□ -2.15
ERCC3P19447 RNU6-363P-201ENST00000362895 105 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 RNU6-1107P-201ENST00000364817 104 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 SNORA22-201ENST00000383907 134 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 MIR125B2-201ENST00000385128 89 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 RNU6-447P-201ENST00000410293 104 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 RNU6-1118P-201ENST00000410382 104 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 RNU6-1076P-201ENST00000410397 104 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 RNU6-355P-201ENST00000410427 104 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 RNU6-791P-201ENST00000410467 104 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 RNU6-705P-201ENST00000410601 104 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 RNU6-1100P-201ENST00000410691 104 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 RNU6-860P-201ENST00000410860 104 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 RNU6-1217P-201ENST00000411276 104 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 RNU6-785P-201ENST00000411324 104 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 MIR4491-201ENST00000581087 68 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 U6.90-201ENST00000614007 104 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 U6.70-201ENST00000620287 104 ntBASIC1.58□□□□□ -2.16
ERCC3P19447 Y_RNA.98-201ENST00000363109 102 ntBASIC1.57□□□□□ -2.16
ERCC3P19447 MIR938-201ENST00000401216 83 ntBASIC1.57□□□□□ -2.16
ERCC3P19447 Y_RNA.85-201ENST00000363014 111 ntBASIC1.56□□□□□ -2.16
ERCC3P19447 U8.6-201ENST00000364939 135 ntBASIC1.56□□□□□ -2.16
ERCC3P19447 SNORD114-24-201ENST00000365029 72 ntBASIC1.56□□□□□ -2.16
ERCC3P19447 Y_RNA.328-201ENST00000365208 113 ntBASIC1.56□□□□□ -2.16
ERCC3P19447 MIR605-201ENST00000385078 83 ntBASIC1.56□□□□□ -2.16
ERCC3P19447 MIR6078-201ENST00000611069 100 ntBASIC1.56□□□□□ -2.16
ERCC3P19447 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
ERCC3P19447 Y_RNA.281-201ENST00000364774 94 ntBASIC1.55□□□□□ -2.16
ERCC3P19447 RNU6-1307P-201ENST00000391012 103 ntBASIC1.55□□□□□ -2.16
ERCC3P19447 Y_RNA.709-201ENST00000516952 92 ntBASIC1.55□□□□□ -2.16
ERCC3P19447 Y_RNA.191-201ENST00000363972 113 ntBASIC1.54□□□□□ -2.16
ERCC3P19447 RNU1-119P-201ENST00000391122 165 ntBASIC1.54□□□□□ -2.16
ERCC3P19447 MIR1827-201ENST00000408549 66 ntBASIC1.54□□□□□ -2.16
ERCC3P19447 AC004223.1-201ENST00000479840 271 ntBASIC1.54□□□□□ -2.16
ERCC3P19447 SNORA25.16-201ENST00000516741 121 ntBASIC1.54□□□□□ -2.16
ERCC3P19447 MIR5009-201ENST00000578736 100 ntBASIC1.54□□□□□ -2.16
ERCC3P19447 MIR4500-201ENST00000579472 76 ntBASIC1.54□□□□□ -2.16
ERCC3P19447 RNU1-124P-201ENST00000363861 145 ntBASIC1.53□□□□□ -2.16
ERCC3P19447 MIR489-201ENST00000384923 84 ntBASIC1.53□□□□□ -2.16
ERCC3P19447 RNU6-919P-201ENST00000516731 104 ntBASIC1.53□□□□□ -2.16
ERCC3P19447 MIR4804-201ENST00000581683 73 ntBASIC1.53□□□□□ -2.16
ERCC3P19447 MIR4452-201ENST00000583004 71 ntBASIC1.53□□□□□ -2.16
ERCC3P19447 MIR3660-201ENST00000584845 100 ntBASIC1.53□□□□□ -2.16
ERCC3P19447 Y_RNA.13-201ENST00000362403 112 ntBASIC1.52□□□□□ -2.17
ERCC3P19447 Y_RNA.119-201ENST00000363301 96 ntBASIC1.52□□□□□ -2.17
ERCC3P19447 snoU13.18-201ENST00000459483 104 ntBASIC1.52□□□□□ -2.17
ERCC3P19447 RNU6-589P-201ENST00000516485 107 ntBASIC1.52□□□□□ -2.17
ERCC3P19447 RNU6-531P-201ENST00000516694 104 ntBASIC1.52□□□□□ -2.17
ERCC3P19447 AC138749.4-201ENST00000563970 127 ntBASIC1.52□□□□□ -2.17
ERCC3P19447 MIR376B-201ENST00000614515 100 ntBASIC1.52□□□□□ -2.17
ERCC3P19447 AP001362.1-201ENST00000625165 124 ntBASIC1.52□□□□□ -2.17
ERCC3P19447 RNU6-1014P-201ENST00000383940 103 ntBASIC1.51□□□□□ -2.17
ERCC3P19447 MIR34C-201ENST00000384831 77 ntBASIC1.51□□□□□ -2.17
ERCC3P19447 RNU6-679P-201ENST00000391003 106 ntBASIC1.51□□□□□ -2.17
ERCC3P19447 SNORA40.6-201ENST00000391153 128 ntBASIC1.51□□□□□ -2.17
ERCC3P19447 U7.7-201ENST00000459276 60 ntBASIC1.51□□□□□ -2.17
ERCC3P19447 PDCD5P2-201ENST00000507570 312 ntBASIC1.51□□□□□ -2.17
ERCC3P19447 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.51□□□□□ -2.17
ERCC3P19447 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.51□□□□□ -2.17
ERCC3P19447 RNU4-58P-201ENST00000363192 141 ntBASIC1.5□□□□□ -2.17
ERCC3P19447 RNY1P2-201ENST00000364820 117 ntBASIC1.5□□□□□ -2.17
ERCC3P19447 RNU6-215P-201ENST00000365169 102 ntBASIC1.5□□□□□ -2.17
ERCC3P19447 SNORD114-22-201ENST00000365423 72 ntBASIC1.5□□□□□ -2.17
ERCC3P19447 MIR520H-201ENST00000385126 88 ntBASIC1.5□□□□□ -2.17
ERCC3P19447 Y_RNA.588-201ENST00000391254 102 ntBASIC1.5□□□□□ -2.17
ERCC3P19447 AL035461.1-201ENST00000421490 332 ntBASIC1.5□□□□□ -2.17
ERCC3P19447 RNU7-102P-201ENST00000458948 62 ntBASIC1.5□□□□□ -2.17
ERCC3P19447 RNU6-1110P-201ENST00000516462 101 ntBASIC1.5□□□□□ -2.17
ERCC3P19447 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
ERCC3P19447 MIR96-201ENST00000362288 78 ntBASIC1.49□□□□□ -2.17
ERCC3P19447 Y_RNA.360-201ENST00000365512 102 ntBASIC1.49□□□□□ -2.17
ERCC3P19447 MIR1302-5-201ENST00000408164 150 ntBASIC1.49□□□□□ -2.17
ERCC3P19447 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.49□□□□□ -2.17
ERCC3P19447 AC141557.1-201ENST00000540982 400 ntBASIC1.49□□□□□ -2.17
ERCC3P19447 MTND5P40-201ENST00000559945 246 ntBASIC1.49□□□□□ -2.17
ERCC3P19447 AC090897.1-201ENST00000580909 226 ntBASIC1.49□□□□□ -2.17
ERCC3P19447 MIR6082-201ENST00000613604 109 ntBASIC1.49□□□□□ -2.17
ERCC3P19447 MIR101-2-201ENST00000362195 79 ntBASIC1.48□□□□□ -2.17
ERCC3P19447 RNU6-369P-201ENST00000362515 102 ntBASIC1.48□□□□□ -2.17
ERCC3P19447 SNORD38.2-201ENST00000384470 69 ntBASIC1.48□□□□□ -2.17
ERCC3P19447 RNY4P18-201ENST00000391107 89 ntBASIC1.48□□□□□ -2.17
ERCC3P19447 AC096949.1-201ENST00000412047 152 ntBASIC1.48□□□□□ -2.17
ERCC3P19447 RMST_2.1-201ENST00000617263 136 ntBASIC1.48□□□□□ -2.17
ERCC3P19447 RNU6-44P-201ENST00000384045 107 ntBASIC1.47□□□□□ -2.17
ERCC3P19447 SNORD105-201ENST00000386910 85 ntBASIC1.47□□□□□ -2.17
ERCC3P19447 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.47□□□□□ -2.17
ERCC3P19447 RNU7-56P-201ENST00000458744 62 ntBASIC1.47□□□□□ -2.17
ERCC3P19447 RNU6-1194P-201ENST00000516208 104 ntBASIC1.47□□□□□ -2.17
ERCC3P19447 AC013244.2-201ENST00000603396 103 ntBASIC1.47□□□□□ -2.17
ERCC3P19447 uc_338.28-201ENST00000612082 187 ntBASIC1.47□□□□□ -2.17
ERCC3P19447 SNORA63.4-201ENST00000362763 126 ntBASIC1.46□□□□□ -2.18
ERCC3P19447 Y_RNA.697-201ENST00000516776 113 ntBASIC1.46□□□□□ -2.18
ERCC3P19447 AC068338.1-201ENST00000565567 176 ntBASIC1.46□□□□□ -2.18
ERCC3P19447 Y_RNA.323-201ENST00000365157 109 ntBASIC1.45□□□□□ -2.18
ERCC3P19447 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
ERCC3P19447 SPINT5P-201ENST00000448174 155 ntBASIC1.45□□□□□ -2.18
ERCC3P19447 OR2A41P-201ENST00000473586 105 ntBASIC1.45□□□□□ -2.18
ERCC3P19447 UBL5P1-201ENST00000507979 193 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 2262.9 ms