Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MIR6509-201ENST00000614603 85 ntBASIC-3.71□□□□□ -3
VCANP13611 RNU5F-3P-201ENST00000363767 117 ntBASIC-3.72□□□□□ -3
VCANP13611 RNU6-300P-201ENST00000459080 104 ntBASIC-3.72□□□□□ -3
VCANP13611 AC005828.6-201ENST00000606610 232 ntBASIC-3.72□□□□□ -3
VCANP13611 MIR4293-201ENST00000584305 78 ntBASIC-3.72□□□□□ -3.01
VCANP13611 MIR4426-201ENST00000640330 63 ntBASIC-3.72□□□□□ -3.01
VCANP13611 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-3.72□□□□□ -3.01
VCANP13611 RNU7-137P-201ENST00000516788 62 ntBASIC-3.72□□□□□ -3.01
VCANP13611 5S_rRNA.13-201ENST00000622298 123 ntBASIC-3.72□□□□□ -3.01
VCANP13611 RNU6-520P-201ENST00000384717 104 ntBASIC-3.73□□□□□ -3.01
VCANP13611 SNORD67.1-201ENST00000516618 108 ntBASIC-3.73□□□□□ -3.01
VCANP13611 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-3.73□□□□□ -3.01
VCANP13611 RNU6-619P-201ENST00000365146 108 ntBASIC-3.73□□□□□ -3.01
VCANP13611 Y_RNA.587-201ENST00000391210 103 ntBASIC-3.73□□□□□ -3.01
VCANP13611 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-3.74□□□□□ -3.01
VCANP13611 AC024909.2-201ENST00000553035 286 ntBASIC-3.74□□□□□ -3.01
VCANP13611 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.74□□□□□ -3.01
VCANP13611 Y_RNA.351-201ENST00000365436 96 ntBASIC-3.74□□□□□ -3.01
VCANP13611 RNA5SP54-201ENST00000516951 92 ntBASIC-3.74□□□□□ -3.01
VCANP13611 AC072046.2-201ENST00000618366 268 ntBASIC-3.74□□□□□ -3.01
VCANP13611 RNA5SP494-201ENST00000410653 129 ntBASIC-3.75□□□□□ -3.01
VCANP13611 RNU6-150P-201ENST00000516237 95 ntBASIC-3.76□□□□□ -3.01
VCANP13611 RNU7-48P-201ENST00000458875 63 ntBASIC-3.76□□□□□ -3.01
VCANP13611 Y_RNA.639-201ENST00000458981 102 ntBASIC-3.76□□□□□ -3.01
VCANP13611 SNORA25.14-201ENST00000516481 132 ntBASIC-3.76□□□□□ -3.01
VCANP13611 AC092747.3-201ENST00000603769 301 ntBASIC-3.76□□□□□ -3.01
VCANP13611 MTND3P12-201ENST00000559068 328 ntBASIC-3.76□□□□□ -3.01
VCANP13611 AL132765.2-201ENST00000610812 351 ntBASIC-3.76□□□□□ -3.01
VCANP13611 SNORD115-38-201ENST00000365037 82 ntBASIC-3.77□□□□□ -3.01
VCANP13611 SNORD116-23-201ENST00000384645 92 ntBASIC-3.77□□□□□ -3.01
VCANP13611 RNU6-893P-201ENST00000458841 100 ntBASIC-3.77□□□□□ -3.01
VCANP13611 EIF1P2-201ENST00000428233 350 ntBASIC-3.77□□□□□ -3.01
VCANP13611 MIR3657-201ENST00000584818 117 ntBASIC-3.77□□□□□ -3.01
VCANP13611 SNORD114-7-201ENST00000362520 77 ntBASIC-3.77□□□□□ -3.01
VCANP13611 MTND3P22-201ENST00000510932 243 ntBASIC-3.77□□□□□ -3.01
VCANP13611 SNORD36C-201ENST00000516733 66 ntBASIC-3.77□□□□□ -3.01
VCANP13611 RNU6-64P-201ENST00000517119 105 ntBASIC-3.77□□□□□ -3.01
VCANP13611 AC119751.7-201ENST00000600494 245 ntBASIC-3.77□□□□□ -3.01
VCANP13611 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.78□□□□□ -3.01
VCANP13611 Y_RNA.242-201ENST00000364473 110 ntBASIC-3.78□□□□□ -3.01
VCANP13611 AC091144.1-201ENST00000519573 138 ntBASIC-3.78□□□□□ -3.01
VCANP13611 C8orf59P2-201ENST00000603441 271 ntBASIC-3.78□□□□□ -3.01
VCANP13611 RNA5SP135-201ENST00000517019 125 ntBASIC-3.78□□□□□ -3.01
VCANP13611 AC073534.2-201ENST00000620377 381 ntBASIC-3.78□□□□□ -3.01
VCANP13611 DLEU2_3.1-201ENST00000620005 73 ntBASIC-3.79□□□□□ -3.02
VCANP13611 Y_RNA.127-201ENST00000363386 109 ntBASIC-3.79□□□□□ -3.02
VCANP13611 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-3.79□□□□□ -3.02
VCANP13611 AC174048.1-201ENST00000603389 144 ntBASIC-3.79□□□□□ -3.02
VCANP13611 AC006254.2-201ENST00000603259 279 ntBASIC-3.79□□□□□ -3.02
VCANP13611 RNA5SP224-201ENST00000365069 126 ntBASIC-3.8□□□□□ -3.02
VCANP13611 RNU6-693P-201ENST00000516134 107 ntBASIC-3.8□□□□□ -3.02
VCANP13611 MIR5696-201ENST00000578474 85 ntBASIC-3.8□□□□□ -3.02
VCANP13611 U2.7-201ENST00000619197 100 ntBASIC-3.8□□□□□ -3.02
VCANP13611 AL445264.1-201ENST00000621719 171 ntBASIC-3.8□□□□□ -3.02
VCANP13611 U2.17-201ENST00000611454 95 ntBASIC-3.8□□□□□ -3.02
VCANP13611 AC009961.2-201ENST00000435771 251 ntBASIC-3.81□□□□□ -3.02
VCANP13611 MIR4724-201ENST00000579485 89 ntBASIC-3.81□□□□□ -3.02
VCANP13611 SNORD1B-201ENST00000363091 84 ntBASIC-3.81□□□□□ -3.02
VCANP13611 RNU6-1318P-201ENST00000365389 103 ntBASIC-3.81□□□□□ -3.02
VCANP13611 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-3.81□□□□□ -3.02
VCANP13611 AC120349.2-201ENST00000625002 298 ntBASIC-3.81□□□□□ -3.02
VCANP13611 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.82□□□□□ -3.02
VCANP13611 MIR206-201ENST00000384872 86 ntBASIC-3.82□□□□□ -3.02
VCANP13611 RNU6-1043P-201ENST00000410355 99 ntBASIC-3.82□□□□□ -3.02
VCANP13611 SNORA36B-201ENST00000410438 131 ntBASIC-3.82□□□□□ -3.02
VCANP13611 SNORA63.2-201ENST00000362603 126 ntBASIC-3.82□□□□□ -3.02
VCANP13611 SNORD27-201ENST00000363981 72 ntBASIC-3.82□□□□□ -3.02
VCANP13611 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-3.82□□□□□ -3.02
VCANP13611 MIR7978-201ENST00000636158 59 ntBASIC-3.82□□□□□ -3.02
VCANP13611 RNU6-77P-201ENST00000410554 91 ntBASIC-3.83□□□□□ -3.02
VCANP13611 AC026741.1-201ENST00000605892 482 ntBASIC-3.83□□□□□ -3.02
VCANP13611 Y_RNA.74-201ENST00000362911 99 ntBASIC-3.83□□□□□ -3.02
VCANP13611 RNU6-554P-201ENST00000410466 106 ntBASIC-3.83□□□□□ -3.02
VCANP13611 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.83□□□□□ -3.02
VCANP13611 USP9YP23-201ENST00000455085 407 ntBASIC-3.83□□□□□ -3.02
VCANP13611 RNU6-1198P-201ENST00000516904 67 ntBASIC-3.83□□□□□ -3.02
VCANP13611 RMST_3.1-201ENST00000611651 109 ntBASIC-3.83□□□□□ -3.02
VCANP13611 AC087741.2-201ENST00000619415 172 ntBASIC-3.83□□□□□ -3.02
VCANP13611 AL603910.2-201ENST00000407268 136 ntBASIC-3.84□□□□□ -3.02
VCANP13611 FGF7P7-201ENST00000514120 227 ntBASIC-3.84□□□□□ -3.02
VCANP13611 Y_RNA.64-201ENST00000362845 102 ntBASIC-3.85□□□□□ -3.03
VCANP13611 AC019193.3-201ENST00000609144 554 ntBASIC-3.85□□□□□ -3.03
VCANP13611 RNU6-470P-201ENST00000515954 104 ntBASIC-3.85□□□□□ -3.03
VCANP13611 RNU6-1234P-201ENST00000516877 103 ntBASIC-3.85□□□□□ -3.03
VCANP13611 AC122108.2-201ENST00000611946 526 ntBASIC-3.85□□□□□ -3.03
VCANP13611 U6.115-201ENST00000636045 103 ntBASIC-3.85□□□□□ -3.03
VCANP13611 RNU6-382P-201ENST00000365181 106 ntBASIC-3.86□□□□□ -3.03
VCANP13611 SNORD45C-201ENST00000383893 79 ntBASIC-3.86□□□□□ -3.03
VCANP13611 MIR548C-201ENST00000384815 97 ntBASIC-3.86□□□□□ -3.03
VCANP13611 MIR125B1-201ENST00000385236 88 ntBASIC-3.86□□□□□ -3.03
VCANP13611 RNU6-710P-201ENST00000410424 105 ntBASIC-3.86□□□□□ -3.03
VCANP13611 AL158209.2-201ENST00000619266 216 ntBASIC-3.86□□□□□ -3.03
VCANP13611 AC090425.1-201ENST00000610007 140 ntBASIC-3.86□□□□□ -3.03
VCANP13611 DLEU2_5.2-201ENST00000610606 84 ntBASIC-3.86□□□□□ -3.03
VCANP13611 RNU7-80P-201ENST00000459562 61 ntBASIC-3.86□□□□□ -3.03
VCANP13611 AC006504.6-201ENST00000590142 199 ntBASIC-3.86□□□□□ -3.03
VCANP13611 MIR6841-201ENST00000637129 72 ntBASIC-3.86□□□□□ -3.03
VCANP13611 DEFB108A-201ENST00000530110 222 ntBASIC-3.87□□□□□ -3.03
VCANP13611 MTATP6P24-201ENST00000576835 677 ntBASIC-3.87□□□□□ -3.03
VCANP13611 RNU6-792P-201ENST00000363490 107 ntBASIC-3.87□□□□□ -3.03
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms