Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
PF4V1P10720 Y_RNA.98-201ENST00000363109 102 ntBASIC0.86□□□□□ -2.27
PF4V1P10720 RNA5SP117-201ENST00000365294 118 ntBASIC0.86□□□□□ -2.27
PF4V1P10720 Y_RNA.448-201ENST00000384185 108 ntBASIC0.86□□□□□ -2.27
PF4V1P10720 MIR548D2-201ENST00000384955 97 ntBASIC0.86□□□□□ -2.27
PF4V1P10720 MIR1285-1-201ENST00000408593 84 ntBASIC0.86□□□□□ -2.27
PF4V1P10720 RNU7-48P-201ENST00000458875 63 ntBASIC0.86□□□□□ -2.27
PF4V1P10720 RNU7-107P-201ENST00000459121 61 ntBASIC0.86□□□□□ -2.27
PF4V1P10720 RNU6-1234P-201ENST00000516877 103 ntBASIC0.86□□□□□ -2.27
PF4V1P10720 Y_RNA.712-201ENST00000517011 92 ntBASIC0.86□□□□□ -2.27
PF4V1P10720 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
PF4V1P10720 MIR18A-201ENST00000362310 71 ntBASIC0.85□□□□□ -2.27
PF4V1P10720 Y_RNA.218-201ENST00000364218 104 ntBASIC0.85□□□□□ -2.27
PF4V1P10720 SNORD115-35-201ENST00000365122 82 ntBASIC0.85□□□□□ -2.27
PF4V1P10720 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.85□□□□□ -2.27
PF4V1P10720 HSBP1P2-201ENST00000299671 229 ntBASIC0.84□□□□□ -2.27
PF4V1P10720 MIR96-201ENST00000362288 78 ntBASIC0.84□□□□□ -2.27
PF4V1P10720 Y_RNA.71-201ENST00000362892 104 ntBASIC0.84□□□□□ -2.27
PF4V1P10720 Y_RNA.119-201ENST00000363301 96 ntBASIC0.84□□□□□ -2.27
PF4V1P10720 Y_RNA.174-201ENST00000363781 105 ntBASIC0.84□□□□□ -2.27
PF4V1P10720 RPS29P1-201ENST00000465274 159 ntBASIC0.84□□□□□ -2.27
PF4V1P10720 RNU6-531P-201ENST00000516694 104 ntBASIC0.84□□□□□ -2.27
PF4V1P10720 Y_RNA.697-201ENST00000516776 113 ntBASIC0.84□□□□□ -2.27
PF4V1P10720 RNU6-865P-201ENST00000364772 107 ntBASIC0.83□□□□□ -2.28
PF4V1P10720 RNU6-81P-201ENST00000365608 104 ntBASIC0.83□□□□□ -2.28
PF4V1P10720 SNORD116-14-201ENST00000383894 92 ntBASIC0.83□□□□□ -2.28
PF4V1P10720 SNORD116-17-201ENST00000383929 92 ntBASIC0.83□□□□□ -2.28
PF4V1P10720 SNORD116-15-201ENST00000384445 92 ntBASIC0.83□□□□□ -2.28
PF4V1P10720 Y_RNA.536-201ENST00000384621 113 ntBASIC0.83□□□□□ -2.28
PF4V1P10720 SNORD116-19-201ENST00000384729 92 ntBASIC0.83□□□□□ -2.28
PF4V1P10720 MIR489-201ENST00000384923 84 ntBASIC0.83□□□□□ -2.28
PF4V1P10720 RNU6-735P-201ENST00000410612 107 ntBASIC0.83□□□□□ -2.28
PF4V1P10720 Y_RNA.630-201ENST00000411370 108 ntBASIC0.83□□□□□ -2.28
PF4V1P10720 RNU6-659P-201ENST00000516454 104 ntBASIC0.83□□□□□ -2.28
PF4V1P10720 MIR151B-201ENST00000584249 96 ntBASIC0.83□□□□□ -2.28
PF4V1P10720 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
PF4V1P10720 AP001362.1-201ENST00000625165 124 ntBASIC0.83□□□□□ -2.28
PF4V1P10720 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.83□□□□□ -2.28
PF4V1P10720 MIR3914-2-201ENST00000637339 95 ntBASIC0.83□□□□□ -2.28
PF4V1P10720 Y_RNA.328-201ENST00000365208 113 ntBASIC0.82□□□□□ -2.28
PF4V1P10720 RNU6-429P-201ENST00000384582 108 ntBASIC0.82□□□□□ -2.28
PF4V1P10720 RNU6-959P-201ENST00000384671 107 ntBASIC0.82□□□□□ -2.28
PF4V1P10720 MIR520E-201ENST00000384867 87 ntBASIC0.82□□□□□ -2.28
PF4V1P10720 SNORD114-21-201ENST00000606412 72 ntBASIC0.82□□□□□ -2.28
PF4V1P10720 U6.95-201ENST00000636931 70 ntBASIC0.82□□□□□ -2.28
PF4V1P10720 MIR101-2-201ENST00000362195 79 ntBASIC0.81□□□□□ -2.28
PF4V1P10720 RNU1-93P-201ENST00000364704 169 ntBASIC0.81□□□□□ -2.28
PF4V1P10720 SNORA36.2-201ENST00000384004 127 ntBASIC0.81□□□□□ -2.28
PF4V1P10720 Y_RNA.773-201ENST00000607168 90 ntBASIC0.81□□□□□ -2.28
PF4V1P10720 RNU6-291P-201ENST00000384720 107 ntBASIC0.8□□□□□ -2.28
PF4V1P10720 RNU6-535P-201ENST00000384722 107 ntBASIC0.8□□□□□ -2.28
PF4V1P10720 MIR140-201ENST00000385282 100 ntBASIC0.8□□□□□ -2.28
PF4V1P10720 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.8□□□□□ -2.28
PF4V1P10720 RNU6-469P-201ENST00000516253 101 ntBASIC0.8□□□□□ -2.28
PF4V1P10720 RNU6-135P-201ENST00000516769 101 ntBASIC0.8□□□□□ -2.28
PF4V1P10720 RNU6-1223P-201ENST00000517124 104 ntBASIC0.8□□□□□ -2.28
PF4V1P10720 MTND5P34-201ENST00000568888 325 ntBASIC0.8□□□□□ -2.28
PF4V1P10720 AC103810.9-201ENST00000606688 112 ntBASIC0.8□□□□□ -2.28
PF4V1P10720 MIR6788-201ENST00000618842 66 ntBASIC0.8□□□□□ -2.28
PF4V1P10720 uc_338.16-201ENST00000621804 95 ntBASIC0.8□□□□□ -2.28
PF4V1P10720 Y_RNA.127-201ENST00000363386 109 ntBASIC0.79□□□□□ -2.28
PF4V1P10720 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.79□□□□□ -2.28
PF4V1P10720 RNU6-521P-201ENST00000516663 105 ntBASIC0.79□□□□□ -2.28
PF4V1P10720 AL590095.2-201ENST00000604136 117 ntBASIC0.79□□□□□ -2.28
PF4V1P10720 MIR6515-201ENST00000619843 57 ntBASIC0.79□□□□□ -2.28
PF4V1P10720 Y_RNA.525-201ENST00000384570 113 ntBASIC0.78□□□□□ -2.28
PF4V1P10720 RNU6-1307P-201ENST00000391012 103 ntBASIC0.78□□□□□ -2.28
PF4V1P10720 MIR1255B1-201ENST00000636325 63 ntBASIC0.78□□□□□ -2.28
PF4V1P10720 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
PF4V1P10720 Y_RNA.56-201ENST00000362798 112 ntBASIC0.77□□□□□ -2.29
PF4V1P10720 RNU4-38P-201ENST00000364472 129 ntBASIC0.77□□□□□ -2.29
PF4V1P10720 RNU4-67P-201ENST00000364569 141 ntBASIC0.77□□□□□ -2.29
PF4V1P10720 Y_RNA.507-201ENST00000384500 99 ntBASIC0.77□□□□□ -2.29
PF4V1P10720 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.77□□□□□ -2.29
PF4V1P10720 AC008267.6-201ENST00000441664 139 ntBASIC0.77□□□□□ -2.29
PF4V1P10720 RNU7-10P-201ENST00000607194 63 ntBASIC0.77□□□□□ -2.29
PF4V1P10720 MIR376B-201ENST00000614515 100 ntBASIC0.77□□□□□ -2.29
PF4V1P10720 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.77□□□□□ -2.29
PF4V1P10720 Y_RNA.32-201ENST00000362589 110 ntBASIC0.76□□□□□ -2.29
PF4V1P10720 RNU6-363P-201ENST00000362895 105 ntBASIC0.76□□□□□ -2.29
PF4V1P10720 Y_RNA.344-201ENST00000365381 112 ntBASIC0.76□□□□□ -2.29
PF4V1P10720 Y_RNA.466-201ENST00000384294 113 ntBASIC0.76□□□□□ -2.29
PF4V1P10720 MIR548J-201ENST00000408833 112 ntBASIC0.76□□□□□ -2.29
PF4V1P10720 AL606490.4-201ENST00000423117 127 ntBASIC0.76□□□□□ -2.29
PF4V1P10720 AC004941.2-201ENST00000427009 228 ntBASIC0.76□□□□□ -2.29
PF4V1P10720 Y_RNA.649-201ENST00000459077 103 ntBASIC0.76□□□□□ -2.29
PF4V1P10720 RNU6-1333P-201ENST00000516162 93 ntBASIC0.76□□□□□ -2.29
PF4V1P10720 SNORA31.14-201ENST00000516728 116 ntBASIC0.76□□□□□ -2.29
PF4V1P10720 MIR4679-2-201ENST00000578358 77 ntBASIC0.76□□□□□ -2.29
PF4V1P10720 MIR3678-201ENST00000578455 94 ntBASIC0.76□□□□□ -2.29
PF4V1P10720 MIR4500-201ENST00000579472 76 ntBASIC0.76□□□□□ -2.29
PF4V1P10720 MIR548H5-201ENST00000580314 60 ntBASIC0.76□□□□□ -2.29
PF4V1P10720 MIR3910-1-201ENST00000580936 111 ntBASIC0.76□□□□□ -2.29
PF4V1P10720 MIR6857-201ENST00000613267 93 ntBASIC0.76□□□□□ -2.29
PF4V1P10720 Y_RNA.362-201ENST00000365518 110 ntBASIC0.75□□□□□ -2.29
PF4V1P10720 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
PF4V1P10720 RPL39P34-201ENST00000477141 156 ntBASIC0.75□□□□□ -2.29
PF4V1P10720 Y_RNA.360-201ENST00000365512 102 ntBASIC0.74□□□□□ -2.29
PF4V1P10720 SNORD38.2-201ENST00000384470 69 ntBASIC0.74□□□□□ -2.29
PF4V1P10720 MIR1912-201ENST00000410389 80 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms