Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 RNU6-1022P-201ENST00000365049 104 ntBASIC2.17□□□□□ -2.06
RARAP10276 MT-TF-201ENST00000387314 71 ntBASIC2.17□□□□□ -2.06
RARAP10276 SNORA3.2-201ENST00000408221 125 ntBASIC2.17□□□□□ -2.06
RARAP10276 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.17□□□□□ -2.06
RARAP10276 Z98742.3-201ENST00000418637 326 ntBASIC2.17□□□□□ -2.06
RARAP10276 AL356320.1-201ENST00000429616 163 ntBASIC2.17□□□□□ -2.06
RARAP10276 RNU7-85P-201ENST00000458851 63 ntBASIC2.17□□□□□ -2.06
RARAP10276 RNU7-153P-201ENST00000516455 62 ntBASIC2.17□□□□□ -2.06
RARAP10276 AL512598.1-201ENST00000610158 273 ntBASIC2.17□□□□□ -2.06
RARAP10276 MIR6516-201ENST00000630554 81 ntBASIC2.17□□□□□ -2.06
RARAP10276 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
RARAP10276 AL596028.1-201ENST00000326971 197 ntBASIC2.16□□□□□ -2.06
RARAP10276 MIR1236-201ENST00000408340 102 ntBASIC2.16□□□□□ -2.06
RARAP10276 MIR1185-1-201ENST00000408598 86 ntBASIC2.16□□□□□ -2.06
RARAP10276 RPL30P7-201ENST00000479312 323 ntBASIC2.16□□□□□ -2.06
RARAP10276 AL133373.1-201ENST00000497098 94 ntBASIC2.16□□□□□ -2.06
RARAP10276 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.16□□□□□ -2.06
RARAP10276 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.16□□□□□ -2.06
RARAP10276 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.15□□□□□ -2.06
RARAP10276 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.15□□□□□ -2.06
RARAP10276 MIR377-201ENST00000362145 69 ntBASIC2.15□□□□□ -2.07
RARAP10276 RNU4-32P-201ENST00000363404 141 ntBASIC2.15□□□□□ -2.07
RARAP10276 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RARAP10276 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RARAP10276 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RARAP10276 SNORA67.3-201ENST00000384366 140 ntBASIC2.14□□□□□ -2.07
RARAP10276 SNORA64-201ENST00000384674 134 ntBASIC2.14□□□□□ -2.07
RARAP10276 Y_RNA.648-201ENST00000459455 110 ntBASIC2.14□□□□□ -2.07
RARAP10276 RNU11-2P-201ENST00000516898 142 ntBASIC2.14□□□□□ -2.07
RARAP10276 MIR1273D-201ENST00000577266 86 ntBASIC2.14□□□□□ -2.07
RARAP10276 MIR4287-201ENST00000579398 78 ntBASIC2.14□□□□□ -2.07
RARAP10276 MIR6779-201ENST00000617283 64 ntBASIC2.14□□□□□ -2.07
RARAP10276 uc_338.20-201ENST00000621563 178 ntBASIC2.14□□□□□ -2.07
RARAP10276 MIR103A2-201ENST00000362154 78 ntBASIC2.13□□□□□ -2.07
RARAP10276 Y_RNA.224-201ENST00000364308 111 ntBASIC2.13□□□□□ -2.07
RARAP10276 SNORA25.13-201ENST00000516395 103 ntBASIC2.13□□□□□ -2.07
RARAP10276 RNA5SP364-201ENST00000516938 78 ntBASIC2.13□□□□□ -2.07
RARAP10276 MIR4648-201ENST00000580107 72 ntBASIC2.13□□□□□ -2.07
RARAP10276 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
RARAP10276 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
RARAP10276 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RARAP10276 RNA5SP264-201ENST00000363115 107 ntBASIC2.12□□□□□ -2.07
RARAP10276 RNU6-654P-201ENST00000364373 107 ntBASIC2.12□□□□□ -2.07
RARAP10276 RN7SKP223-201ENST00000410582 62 ntBASIC2.12□□□□□ -2.07
RARAP10276 AC005908.1-201ENST00000468701 347 ntBASIC2.12□□□□□ -2.07
RARAP10276 MIR4299-201ENST00000577899 72 ntBASIC2.12□□□□□ -2.07
RARAP10276 Y_RNA.783-201ENST00000613546 102 ntBASIC2.12□□□□□ -2.07
RARAP10276 MIR8063-201ENST00000621930 81 ntBASIC2.12□□□□□ -2.07
RARAP10276 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
RARAP10276 MIR302D-201ENST00000362275 68 ntBASIC2.11□□□□□ -2.07
RARAP10276 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RARAP10276 RNA5SP95-201ENST00000410319 137 ntBASIC2.11□□□□□ -2.07
RARAP10276 RNA5SP425-201ENST00000410336 112 ntBASIC2.11□□□□□ -2.07
RARAP10276 RNU6-65P-201ENST00000516332 98 ntBASIC2.11□□□□□ -2.07
RARAP10276 SNRPGP19-201ENST00000603826 189 ntBASIC2.11□□□□□ -2.07
RARAP10276 MIR8070-201ENST00000616510 88 ntBASIC2.11□□□□□ -2.07
RARAP10276 MIR219B-201ENST00000637023 88 ntBASIC2.11□□□□□ -2.07
RARAP10276 RNU6-580P-201ENST00000365159 107 ntBASIC2.1□□□□□ -2.07
RARAP10276 SNORA72.6-201ENST00000384520 129 ntBASIC2.1□□□□□ -2.07
RARAP10276 SUMO2P12-201ENST00000405924 140 ntBASIC2.1□□□□□ -2.07
RARAP10276 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RARAP10276 AC023790.1-201ENST00000482174 347 ntBASIC2.1□□□□□ -2.07
RARAP10276 MIR5089-201ENST00000580047 84 ntBASIC2.1□□□□□ -2.07
RARAP10276 MIR4491-201ENST00000581087 68 ntBASIC2.1□□□□□ -2.07
RARAP10276 AC103810.8-201ENST00000607347 118 ntBASIC2.1□□□□□ -2.07
RARAP10276 RNU6-315P-201ENST00000362666 107 ntBASIC2.09□□□□□ -2.07
RARAP10276 SNORD36A-201ENST00000362874 73 ntBASIC2.09□□□□□ -2.07
RARAP10276 Y_RNA.540-201ENST00000384638 111 ntBASIC2.09□□□□□ -2.07
RARAP10276 MIR516A2-201ENST00000384888 90 ntBASIC2.09□□□□□ -2.07
RARAP10276 MIR516A1-201ENST00000385033 90 ntBASIC2.09□□□□□ -2.07
RARAP10276 Y_RNA.588-201ENST00000391254 102 ntBASIC2.09□□□□□ -2.07
RARAP10276 MIR889-201ENST00000401280 79 ntBASIC2.09□□□□□ -2.07
RARAP10276 HMGN2P23-201ENST00000456759 269 ntBASIC2.09□□□□□ -2.07
RARAP10276 snoU13.11-201ENST00000459219 104 ntBASIC2.09□□□□□ -2.07
RARAP10276 RNU6-531P-201ENST00000516694 104 ntBASIC2.09□□□□□ -2.07
RARAP10276 RNU6-129P-201ENST00000391022 107 ntBASIC2.08□□□□□ -2.08
RARAP10276 RNU6-1254P-201ENST00000391266 104 ntBASIC2.08□□□□□ -2.08
RARAP10276 MIR18B-201ENST00000454574 71 ntBASIC2.08□□□□□ -2.08
RARAP10276 RNA5SP61-201ENST00000516453 100 ntBASIC2.08□□□□□ -2.08
RARAP10276 SNORA25.16-201ENST00000516741 121 ntBASIC2.08□□□□□ -2.08
RARAP10276 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.08□□□□□ -2.08
RARAP10276 RNU6-624P-201ENST00000363411 107 ntBASIC2.07□□□□□ -2.08
RARAP10276 RNU6-478P-201ENST00000363904 110 ntBASIC2.07□□□□□ -2.08
RARAP10276 SNORD1A-201ENST00000364968 72 ntBASIC2.07□□□□□ -2.08
RARAP10276 RNU6-53P-201ENST00000365367 106 ntBASIC2.07□□□□□ -2.08
RARAP10276 SNORD93-201ENST00000408813 74 ntBASIC2.07□□□□□ -2.08
RARAP10276 snoU13.9-201ENST00000458927 103 ntBASIC2.07□□□□□ -2.08
RARAP10276 AC019176.1-201ENST00000518519 225 ntBASIC2.07□□□□□ -2.08
RARAP10276 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.07□□□□□ -2.08
RARAP10276 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.07□□□□□ -2.08
RARAP10276 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RARAP10276 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
RARAP10276 RNU4-58P-201ENST00000363192 141 ntBASIC2.06□□□□□ -2.08
RARAP10276 RNU6-243P-201ENST00000391140 107 ntBASIC2.06□□□□□ -2.08
RARAP10276 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RARAP10276 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.05□□□□□ -2.08
RARAP10276 SNORD114-26-201ENST00000363543 72 ntBASIC2.05□□□□□ -2.08
RARAP10276 RNU6-1229P-201ENST00000364295 107 ntBASIC2.05□□□□□ -2.08
RARAP10276 RNU1-36P-201ENST00000365130 165 ntBASIC2.05□□□□□ -2.08
RARAP10276 RNU6-811P-201ENST00000384069 107 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms