Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 MIR125B2-201ENST00000385128 89 ntBASIC0.9□□□□□ -2.27
MMP3P08254 RNU4-83P-201ENST00000410863 133 ntBASIC0.9□□□□□ -2.27
MMP3P08254 Y_RNA.712-201ENST00000517011 92 ntBASIC0.9□□□□□ -2.27
MMP3P08254 RNU7-156P-201ENST00000517214 74 ntBASIC0.9□□□□□ -2.27
MMP3P08254 MIR4661-201ENST00000582720 75 ntBASIC0.9□□□□□ -2.27
MMP3P08254 MIR1255B1-201ENST00000636325 63 ntBASIC0.9□□□□□ -2.27
MMP3P08254 RNU6-364P-201ENST00000384387 107 ntBASIC0.89□□□□□ -2.27
MMP3P08254 MIR206-201ENST00000384872 86 ntBASIC0.89□□□□□ -2.27
MMP3P08254 MIR759-201ENST00000390224 91 ntBASIC0.89□□□□□ -2.27
MMP3P08254 Y_RNA.588-201ENST00000391254 102 ntBASIC0.89□□□□□ -2.27
MMP3P08254 AL606753.1-201ENST00000427435 87 ntBASIC0.89□□□□□ -2.27
MMP3P08254 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
MMP3P08254 SNORA25.16-201ENST00000516741 121 ntBASIC0.89□□□□□ -2.27
MMP3P08254 MIR4491-201ENST00000581087 68 ntBASIC0.89□□□□□ -2.27
MMP3P08254 U6.109-201ENST00000636749 87 ntBASIC0.89□□□□□ -2.27
MMP3P08254 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
MMP3P08254 Y_RNA.344-201ENST00000365381 112 ntBASIC0.88□□□□□ -2.27
MMP3P08254 Y_RNA.346-201ENST00000365385 112 ntBASIC0.88□□□□□ -2.27
MMP3P08254 Y_RNA.448-201ENST00000384185 108 ntBASIC0.88□□□□□ -2.27
MMP3P08254 MIR548D2-201ENST00000384955 97 ntBASIC0.88□□□□□ -2.27
MMP3P08254 MIR548A1-201ENST00000385041 97 ntBASIC0.88□□□□□ -2.27
MMP3P08254 SNORD105-201ENST00000386910 85 ntBASIC0.88□□□□□ -2.27
MMP3P08254 RNU6-1321P-201ENST00000390905 107 ntBASIC0.88□□□□□ -2.27
MMP3P08254 MIR938-201ENST00000401216 83 ntBASIC0.88□□□□□ -2.27
MMP3P08254 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.88□□□□□ -2.27
MMP3P08254 RNU7-102P-201ENST00000458948 62 ntBASIC0.88□□□□□ -2.27
MMP3P08254 U7.7-201ENST00000459276 60 ntBASIC0.88□□□□□ -2.27
MMP3P08254 RNU6-1110P-201ENST00000516462 101 ntBASIC0.88□□□□□ -2.27
MMP3P08254 AC133485.1-201ENST00000567176 124 ntBASIC0.88□□□□□ -2.27
MMP3P08254 AC138907.6-201ENST00000568401 126 ntBASIC0.88□□□□□ -2.27
MMP3P08254 MIR8066-201ENST00000617280 78 ntBASIC0.88□□□□□ -2.27
MMP3P08254 Y_RNA.13-201ENST00000362403 112 ntBASIC0.87□□□□□ -2.27
MMP3P08254 RNA5SP133-201ENST00000363368 119 ntBASIC0.87□□□□□ -2.27
MMP3P08254 RNU6-22P-201ENST00000384355 107 ntBASIC0.87□□□□□ -2.27
MMP3P08254 RNU6-1117P-201ENST00000384525 104 ntBASIC0.87□□□□□ -2.27
MMP3P08254 SNORD99-201ENST00000408612 74 ntBASIC0.87□□□□□ -2.27
MMP3P08254 AC008267.6-201ENST00000441664 139 ntBASIC0.87□□□□□ -2.27
MMP3P08254 RNU7-56P-201ENST00000458744 62 ntBASIC0.87□□□□□ -2.27
MMP3P08254 Y_RNA.649-201ENST00000459077 103 ntBASIC0.87□□□□□ -2.27
MMP3P08254 MIR6513-201ENST00000621188 64 ntBASIC0.87□□□□□ -2.27
MMP3P08254 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
MMP3P08254 RNU1-119P-201ENST00000391122 165 ntBASIC0.86□□□□□ -2.27
MMP3P08254 RNU7-2P-201ENST00000516096 62 ntBASIC0.86□□□□□ -2.27
MMP3P08254 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
MMP3P08254 ACA64.5-201ENST00000516207 127 ntBASIC0.86□□□□□ -2.27
MMP3P08254 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.86□□□□□ -2.27
MMP3P08254 AL136317.1-201ENST00000612653 226 ntBASIC0.86□□□□□ -2.27
MMP3P08254 AL035470.1-201ENST00000622571 220 ntBASIC0.86□□□□□ -2.27
MMP3P08254 SNORD114-10-201ENST00000363409 72 ntBASIC0.85□□□□□ -2.27
MMP3P08254 Y_RNA.549-201ENST00000384657 102 ntBASIC0.85□□□□□ -2.27
MMP3P08254 MIR193B-201ENST00000384907 83 ntBASIC0.85□□□□□ -2.27
MMP3P08254 MIR548A3-201ENST00000385297 97 ntBASIC0.85□□□□□ -2.27
MMP3P08254 RNU6-1154P-201ENST00000391001 104 ntBASIC0.85□□□□□ -2.27
MMP3P08254 RNU6-406P-201ENST00000516470 107 ntBASIC0.85□□□□□ -2.27
MMP3P08254 DEFB131E-201ENST00000532329 154 ntBASIC0.85□□□□□ -2.27
MMP3P08254 AC138749.4-201ENST00000563970 127 ntBASIC0.85□□□□□ -2.27
MMP3P08254 MTND5P34-201ENST00000568888 325 ntBASIC0.85□□□□□ -2.27
MMP3P08254 SNORD115-19-201ENST00000363098 82 ntBASIC0.84□□□□□ -2.27
MMP3P08254 SNORD115-18-201ENST00000363293 82 ntBASIC0.84□□□□□ -2.27
MMP3P08254 SNORD115-17-201ENST00000364612 82 ntBASIC0.84□□□□□ -2.27
MMP3P08254 Y_RNA.353-201ENST00000365440 108 ntBASIC0.84□□□□□ -2.27
MMP3P08254 Y_RNA.362-201ENST00000365518 110 ntBASIC0.84□□□□□ -2.27
MMP3P08254 RNU6-447P-201ENST00000410293 104 ntBASIC0.84□□□□□ -2.27
MMP3P08254 RNU6-1118P-201ENST00000410382 104 ntBASIC0.84□□□□□ -2.27
MMP3P08254 RNU6-1076P-201ENST00000410397 104 ntBASIC0.84□□□□□ -2.27
MMP3P08254 RNU6-355P-201ENST00000410427 104 ntBASIC0.84□□□□□ -2.27
MMP3P08254 RNU6-791P-201ENST00000410467 104 ntBASIC0.84□□□□□ -2.27
MMP3P08254 RNU6-705P-201ENST00000410601 104 ntBASIC0.84□□□□□ -2.27
MMP3P08254 SNORA7.5-201ENST00000410672 110 ntBASIC0.84□□□□□ -2.27
MMP3P08254 RNU6-1100P-201ENST00000410691 104 ntBASIC0.84□□□□□ -2.27
MMP3P08254 RNU6-860P-201ENST00000410860 104 ntBASIC0.84□□□□□ -2.27
MMP3P08254 RNU6-1217P-201ENST00000411276 104 ntBASIC0.84□□□□□ -2.27
MMP3P08254 RNU6-785P-201ENST00000411324 104 ntBASIC0.84□□□□□ -2.27
MMP3P08254 RNU6-531P-201ENST00000516694 104 ntBASIC0.84□□□□□ -2.27
MMP3P08254 RNU6-789P-201ENST00000517105 102 ntBASIC0.84□□□□□ -2.27
MMP3P08254 AC011195.1-201ENST00000578177 177 ntBASIC0.84□□□□□ -2.27
MMP3P08254 SNORD92-201ENST00000585078 85 ntBASIC0.84□□□□□ -2.27
MMP3P08254 MIR6082-201ENST00000613604 109 ntBASIC0.84□□□□□ -2.27
MMP3P08254 U6.90-201ENST00000614007 104 ntBASIC0.84□□□□□ -2.27
MMP3P08254 U6.70-201ENST00000620287 104 ntBASIC0.84□□□□□ -2.27
MMP3P08254 MIR6835-201ENST00000621552 64 ntBASIC0.84□□□□□ -2.27
MMP3P08254 U6.95-201ENST00000636931 70 ntBASIC0.84□□□□□ -2.27
MMP3P08254 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
MMP3P08254 Y_RNA.42-201ENST00000362660 108 ntBASIC0.83□□□□□ -2.28
MMP3P08254 Y_RNA.374-201ENST00000365606 101 ntBASIC0.83□□□□□ -2.28
MMP3P08254 MIR508-201ENST00000384857 115 ntBASIC0.83□□□□□ -2.28
MMP3P08254 RNU6-1168P-201ENST00000390831 104 ntBASIC0.83□□□□□ -2.28
MMP3P08254 RNU6-62P-201ENST00000516526 102 ntBASIC0.83□□□□□ -2.28
MMP3P08254 RNU6-521P-201ENST00000516663 105 ntBASIC0.83□□□□□ -2.28
MMP3P08254 U2.22-201ENST00000636441 106 ntBASIC0.83□□□□□ -2.28
MMP3P08254 SNORA63.5-201ENST00000363548 123 ntBASIC0.82□□□□□ -2.28
MMP3P08254 RNU7-48P-201ENST00000458875 63 ntBASIC0.82□□□□□ -2.28
MMP3P08254 AC007012.1-201ENST00000567192 175 ntBASIC0.82□□□□□ -2.28
MMP3P08254 MIR1273G-201ENST00000577677 100 ntBASIC0.82□□□□□ -2.28
MMP3P08254 AL590095.2-201ENST00000604136 117 ntBASIC0.82□□□□□ -2.28
MMP3P08254 AL670379.3-201ENST00000605040 251 ntBASIC0.82□□□□□ -2.28
MMP3P08254 AL353765.1-201ENST00000605514 183 ntBASIC0.82□□□□□ -2.28
MMP3P08254 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
MMP3P08254 Y_RNA.119-201ENST00000363301 96 ntBASIC0.81□□□□□ -2.28
MMP3P08254 RNY4P6-201ENST00000363667 96 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms