Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AL133373.1-201ENST00000497098 94 ntBASIC2.26□□□□□ -2.05
THBS1P07996 RNA5SP320-201ENST00000516263 124 ntBASIC2.26□□□□□ -2.05
THBS1P07996 RNA5SP402-201ENST00000517148 110 ntBASIC2.26□□□□□ -2.05
THBS1P07996 U6.111-201ENST00000636093 83 ntBASIC2.26□□□□□ -2.05
THBS1P07996 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.26□□□□□ -2.05
THBS1P07996 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
THBS1P07996 Y_RNA.36-201ENST00000362602 112 ntBASIC2.25□□□□□ -2.05
THBS1P07996 Y_RNA.42-201ENST00000362660 108 ntBASIC2.25□□□□□ -2.05
THBS1P07996 Y_RNA.205-201ENST00000364128 113 ntBASIC2.25□□□□□ -2.05
THBS1P07996 RNA5SP212-201ENST00000391223 107 ntBASIC2.25□□□□□ -2.05
THBS1P07996 AL359511.1-201ENST00000402970 211 ntBASIC2.25□□□□□ -2.05
THBS1P07996 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
THBS1P07996 RNU6-800P-201ENST00000384473 103 ntBASIC2.24□□□□□ -2.05
THBS1P07996 RNU6-1241P-201ENST00000384536 107 ntBASIC2.24□□□□□ -2.05
THBS1P07996 SNORD100-201ENST00000408573 76 ntBASIC2.24□□□□□ -2.05
THBS1P07996 MIR1261-201ENST00000408659 82 ntBASIC2.24□□□□□ -2.05
THBS1P07996 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.24□□□□□ -2.05
THBS1P07996 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
THBS1P07996 AL596028.1-201ENST00000326971 197 ntBASIC2.23□□□□□ -2.05
THBS1P07996 SNORA25.3-201ENST00000363205 127 ntBASIC2.23□□□□□ -2.05
THBS1P07996 SNORD114-30-201ENST00000364448 72 ntBASIC2.23□□□□□ -2.05
THBS1P07996 RNU6-1051P-201ENST00000365471 102 ntBASIC2.23□□□□□ -2.05
THBS1P07996 Y_RNA.386-201ENST00000383913 105 ntBASIC2.23□□□□□ -2.05
THBS1P07996 SNORA70B-201ENST00000384210 135 ntBASIC2.23□□□□□ -2.05
THBS1P07996 Y_RNA.536-201ENST00000384621 113 ntBASIC2.23□□□□□ -2.05
THBS1P07996 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
THBS1P07996 SNORA25.16-201ENST00000516741 121 ntBASIC2.23□□□□□ -2.05
THBS1P07996 MIR514B-201ENST00000516774 80 ntBASIC2.23□□□□□ -2.05
THBS1P07996 SNRPGP19-201ENST00000603826 189 ntBASIC2.23□□□□□ -2.05
THBS1P07996 MIR6895-201ENST00000613497 78 ntBASIC2.23□□□□□ -2.05
THBS1P07996 MIR1291-201ENST00000627649 87 ntBASIC2.23□□□□□ -2.05
THBS1P07996 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.22□□□□□ -2.05
THBS1P07996 RNU6-1260P-201ENST00000362944 107 ntBASIC2.22□□□□□ -2.05
THBS1P07996 RNU6-471P-201ENST00000383944 106 ntBASIC2.22□□□□□ -2.05
THBS1P07996 RNU6-540P-201ENST00000384622 101 ntBASIC2.22□□□□□ -2.05
THBS1P07996 Y_RNA.588-201ENST00000391254 102 ntBASIC2.22□□□□□ -2.05
THBS1P07996 RNA5SP508-201ENST00000411327 119 ntBASIC2.22□□□□□ -2.05
THBS1P07996 AC093423.1-201ENST00000440817 142 ntBASIC2.22□□□□□ -2.05
THBS1P07996 Y_RNA.809-201ENST00000516058 95 ntBASIC2.22□□□□□ -2.05
THBS1P07996 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.22□□□□□ -2.05
THBS1P07996 RNA5SP24-201ENST00000516478 95 ntBASIC2.22□□□□□ -2.05
THBS1P07996 RNU2-19P-201ENST00000517288 84 ntBASIC2.22□□□□□ -2.05
THBS1P07996 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
THBS1P07996 MIR103A2-201ENST00000362154 78 ntBASIC2.21□□□□□ -2.06
THBS1P07996 Y_RNA.56-201ENST00000362798 112 ntBASIC2.21□□□□□ -2.06
THBS1P07996 RNU6-403P-201ENST00000363163 104 ntBASIC2.21□□□□□ -2.06
THBS1P07996 RNU1-36P-201ENST00000365130 165 ntBASIC2.21□□□□□ -2.06
THBS1P07996 RNU6-580P-201ENST00000365159 107 ntBASIC2.21□□□□□ -2.06
THBS1P07996 RNU6-663P-201ENST00000391105 106 ntBASIC2.21□□□□□ -2.06
THBS1P07996 SNORA3.2-201ENST00000408221 125 ntBASIC2.21□□□□□ -2.06
THBS1P07996 AP003716.2-201ENST00000528260 108 ntBASIC2.21□□□□□ -2.06
THBS1P07996 SNORD53-201ENST00000579969 78 ntBASIC2.21□□□□□ -2.06
THBS1P07996 TRDV1-202ENST00000621643 102 ntBASIC2.21□□□□□ -2.06
THBS1P07996 MIR6516-201ENST00000630554 81 ntBASIC2.21□□□□□ -2.06
THBS1P07996 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
THBS1P07996 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
THBS1P07996 MIR21-201ENST00000362134 72 ntBASIC2.2□□□□□ -2.06
THBS1P07996 SNORD23.1-201ENST00000408212 104 ntBASIC2.2□□□□□ -2.06
THBS1P07996 RNU6-237P-201ENST00000515985 71 ntBASIC2.2□□□□□ -2.06
THBS1P07996 RNU7-193P-201ENST00000516723 65 ntBASIC2.2□□□□□ -2.06
THBS1P07996 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
THBS1P07996 ZNF658B-202ENST00000615961 3375 ntBASIC2.19□□□□□ -2.06
THBS1P07996 RNU6-340P-201ENST00000364005 107 ntBASIC2.19□□□□□ -2.06
THBS1P07996 Y_RNA.207-201ENST00000364142 106 ntBASIC2.19□□□□□ -2.06
THBS1P07996 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.19□□□□□ -2.06
THBS1P07996 RNU7-195P-201ENST00000458793 62 ntBASIC2.19□□□□□ -2.06
THBS1P07996 RNU6-947P-201ENST00000516264 106 ntBASIC2.19□□□□□ -2.06
THBS1P07996 AC015688.6-201ENST00000577737 104 ntBASIC2.19□□□□□ -2.06
THBS1P07996 AL137847.3-201ENST00000611521 109 ntBASIC2.19□□□□□ -2.06
THBS1P07996 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.19□□□□□ -2.06
THBS1P07996 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.19□□□□□ -2.06
THBS1P07996 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
THBS1P07996 RNA5SP264-201ENST00000363115 107 ntBASIC2.18□□□□□ -2.06
THBS1P07996 SNORD101-201ENST00000384027 73 ntBASIC2.18□□□□□ -2.06
THBS1P07996 AC097635.1-201ENST00000450678 155 ntBASIC2.18□□□□□ -2.06
THBS1P07996 TRAJ51-201ENST00000504127 63 ntBASIC2.18□□□□□ -2.06
THBS1P07996 AC026436.1-201ENST00000510537 270 ntBASIC2.18□□□□□ -2.06
THBS1P07996 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.18□□□□□ -2.06
THBS1P07996 MIR664A-201ENST00000626086 82 ntBASIC2.18□□□□□ -2.06
THBS1P07996 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
THBS1P07996 RNU6-664P-201ENST00000362381 107 ntBASIC2.17□□□□□ -2.06
THBS1P07996 RNU6-154P-201ENST00000384306 106 ntBASIC2.17□□□□□ -2.06
THBS1P07996 Y_RNA.606-201ENST00000410579 103 ntBASIC2.17□□□□□ -2.06
THBS1P07996 RNU6-765P-201ENST00000516916 99 ntBASIC2.17□□□□□ -2.06
THBS1P07996 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.17□□□□□ -2.06
THBS1P07996 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
THBS1P07996 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
THBS1P07996 RNA5SP289-201ENST00000362332 137 ntBASIC2.16□□□□□ -2.06
THBS1P07996 RNU6-291P-201ENST00000384720 107 ntBASIC2.16□□□□□ -2.06
THBS1P07996 MIR1257-201ENST00000408490 117 ntBASIC2.16□□□□□ -2.06
THBS1P07996 MIR1185-1-201ENST00000408598 86 ntBASIC2.16□□□□□ -2.06
THBS1P07996 AC244636.1-201ENST00000421152 228 ntBASIC2.16□□□□□ -2.06
THBS1P07996 AC008413.1-201ENST00000511864 177 ntBASIC2.16□□□□□ -2.06
THBS1P07996 MIR5694-201ENST00000581190 76 ntBASIC2.16□□□□□ -2.06
THBS1P07996 MIR5007-201ENST00000583098 95 ntBASIC2.16□□□□□ -2.06
THBS1P07996 MIR3675-201ENST00000583661 73 ntBASIC2.16□□□□□ -2.06
THBS1P07996 MIR8053-201ENST00000613344 75 ntBASIC2.16□□□□□ -2.06
THBS1P07996 uc_338.6-201ENST00000613544 171 ntBASIC2.16□□□□□ -2.06
THBS1P07996 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
THBS1P07996 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 215.1 ms