Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RNU1-123P-201ENST00000458950 160 ntBASIC1.63□□□□□ -2.15
CHGBP05060 RNU1-98P-201ENST00000458992 160 ntBASIC1.63□□□□□ -2.15
CHGBP05060 AC012676.2-201ENST00000619258 186 ntBASIC1.63□□□□□ -2.15
CHGBP05060 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.63□□□□□ -2.15
CHGBP05060 AP001362.1-201ENST00000625165 124 ntBASIC1.63□□□□□ -2.15
CHGBP05060 Y_RNA.17-201ENST00000362433 111 ntBASIC1.62□□□□□ -2.15
CHGBP05060 SNORD38.2-201ENST00000384470 69 ntBASIC1.62□□□□□ -2.15
CHGBP05060 Y_RNA.567-201ENST00000384736 106 ntBASIC1.62□□□□□ -2.15
CHGBP05060 RNU6-972P-201ENST00000391208 107 ntBASIC1.62□□□□□ -2.15
CHGBP05060 RNU6-447P-201ENST00000410293 104 ntBASIC1.62□□□□□ -2.15
CHGBP05060 RNU6-1118P-201ENST00000410382 104 ntBASIC1.62□□□□□ -2.15
CHGBP05060 RNU6-1076P-201ENST00000410397 104 ntBASIC1.62□□□□□ -2.15
CHGBP05060 RNU6-355P-201ENST00000410427 104 ntBASIC1.62□□□□□ -2.15
CHGBP05060 RNU6-791P-201ENST00000410467 104 ntBASIC1.62□□□□□ -2.15
CHGBP05060 RNU6-705P-201ENST00000410601 104 ntBASIC1.62□□□□□ -2.15
CHGBP05060 RNU6-1100P-201ENST00000410691 104 ntBASIC1.62□□□□□ -2.15
CHGBP05060 RNU6-860P-201ENST00000410860 104 ntBASIC1.62□□□□□ -2.15
CHGBP05060 RNU6-1217P-201ENST00000411276 104 ntBASIC1.62□□□□□ -2.15
CHGBP05060 RNU6-785P-201ENST00000411324 104 ntBASIC1.62□□□□□ -2.15
CHGBP05060 RPS27P16-201ENST00000425758 201 ntBASIC1.62□□□□□ -2.15
CHGBP05060 RNU1-92P-201ENST00000517017 135 ntBASIC1.62□□□□□ -2.15
CHGBP05060 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.62□□□□□ -2.15
CHGBP05060 MIR4498-201ENST00000577599 66 ntBASIC1.62□□□□□ -2.15
CHGBP05060 MIR3664-201ENST00000579074 99 ntBASIC1.62□□□□□ -2.15
CHGBP05060 MIR4500-201ENST00000579472 76 ntBASIC1.62□□□□□ -2.15
CHGBP05060 AC090897.1-201ENST00000580909 226 ntBASIC1.62□□□□□ -2.15
CHGBP05060 SNORA4-201ENST00000584302 138 ntBASIC1.62□□□□□ -2.15
CHGBP05060 snoU13.31-201ENST00000607291 104 ntBASIC1.62□□□□□ -2.15
CHGBP05060 U6.90-201ENST00000614007 104 ntBASIC1.62□□□□□ -2.15
CHGBP05060 U6.70-201ENST00000620287 104 ntBASIC1.62□□□□□ -2.15
CHGBP05060 SNORD33-201ENST00000362761 85 ntBASIC1.61□□□□□ -2.15
CHGBP05060 Y_RNA.96-201ENST00000363092 109 ntBASIC1.61□□□□□ -2.15
CHGBP05060 RNY1P10-201ENST00000363268 113 ntBASIC1.61□□□□□ -2.15
CHGBP05060 SNORA7.1-201ENST00000363750 139 ntBASIC1.61□□□□□ -2.15
CHGBP05060 MIR450A2-201ENST00000385022 100 ntBASIC1.61□□□□□ -2.15
CHGBP05060 Y_RNA.593-201ENST00000410292 98 ntBASIC1.61□□□□□ -2.15
CHGBP05060 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.61□□□□□ -2.15
CHGBP05060 RNU6-165P-201ENST00000517170 99 ntBASIC1.61□□□□□ -2.15
CHGBP05060 RNU6-902P-201ENST00000517212 91 ntBASIC1.61□□□□□ -2.15
CHGBP05060 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CHGBP05060 MIR30D-201ENST00000362283 70 ntBASIC1.6□□□□□ -2.15
CHGBP05060 RNA5SP173-201ENST00000364857 136 ntBASIC1.6□□□□□ -2.15
CHGBP05060 SNORA2B-201ENST00000384583 137 ntBASIC1.6□□□□□ -2.15
CHGBP05060 RNU6-955P-201ENST00000410497 104 ntBASIC1.6□□□□□ -2.15
CHGBP05060 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.6□□□□□ -2.15
CHGBP05060 AC048334.1-201ENST00000477975 159 ntBASIC1.6□□□□□ -2.15
CHGBP05060 RPL30P7-201ENST00000479312 323 ntBASIC1.6□□□□□ -2.15
CHGBP05060 RN7SKP88-201ENST00000516847 250 ntBASIC1.6□□□□□ -2.15
CHGBP05060 AL512310.8-201ENST00000550183 120 ntBASIC1.6□□□□□ -2.15
CHGBP05060 7SK.8-201ENST00000612110 250 ntBASIC1.6□□□□□ -2.15
CHGBP05060 7SK.11-201ENST00000615477 250 ntBASIC1.6□□□□□ -2.15
CHGBP05060 7SK.13-201ENST00000622040 250 ntBASIC1.6□□□□□ -2.15
CHGBP05060 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.15
CHGBP05060 RNA5SP133-201ENST00000363368 119 ntBASIC1.59□□□□□ -2.15
CHGBP05060 Y_RNA.338-201ENST00000365320 114 ntBASIC1.59□□□□□ -2.15
CHGBP05060 RNU6-53P-201ENST00000365367 106 ntBASIC1.59□□□□□ -2.15
CHGBP05060 RNU6-573P-201ENST00000383938 106 ntBASIC1.59□□□□□ -2.15
CHGBP05060 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CHGBP05060 RNU6-402P-201ENST00000410678 103 ntBASIC1.59□□□□□ -2.15
CHGBP05060 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.59□□□□□ -2.15
CHGBP05060 RN7SKP12-201ENST00000516275 143 ntBASIC1.59□□□□□ -2.15
CHGBP05060 AP003716.2-201ENST00000528260 108 ntBASIC1.59□□□□□ -2.15
CHGBP05060 AC138749.4-201ENST00000563970 127 ntBASIC1.59□□□□□ -2.15
CHGBP05060 MIR4439-201ENST00000583746 80 ntBASIC1.59□□□□□ -2.15
CHGBP05060 IGLL4P-201ENST00000614590 133 ntBASIC1.59□□□□□ -2.15
CHGBP05060 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
CHGBP05060 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.58□□□□□ -2.16
CHGBP05060 Y_RNA.168-201ENST00000363740 102 ntBASIC1.58□□□□□ -2.16
CHGBP05060 RNY1P1-201ENST00000364372 112 ntBASIC1.58□□□□□ -2.16
CHGBP05060 SNORD58A-201ENST00000383875 65 ntBASIC1.58□□□□□ -2.16
CHGBP05060 SNORA72.6-201ENST00000384520 129 ntBASIC1.58□□□□□ -2.16
CHGBP05060 MIR563-201ENST00000385080 79 ntBASIC1.58□□□□□ -2.16
CHGBP05060 SNORD93-201ENST00000408813 74 ntBASIC1.58□□□□□ -2.16
CHGBP05060 AC015818.7-201ENST00000428754 109 ntBASIC1.58□□□□□ -2.16
CHGBP05060 AC087499.7-201ENST00000441958 109 ntBASIC1.58□□□□□ -2.16
CHGBP05060 snoU13.21-201ENST00000459368 105 ntBASIC1.58□□□□□ -2.16
CHGBP05060 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.58□□□□□ -2.16
CHGBP05060 MIR3660-201ENST00000584845 100 ntBASIC1.58□□□□□ -2.16
CHGBP05060 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CHGBP05060 Y_RNA.73-201ENST00000362910 113 ntBASIC1.57□□□□□ -2.16
CHGBP05060 Y_RNA.119-201ENST00000363301 96 ntBASIC1.57□□□□□ -2.16
CHGBP05060 RNU6-1244P-201ENST00000363614 108 ntBASIC1.57□□□□□ -2.16
CHGBP05060 BX276092.1-201ENST00000427368 251 ntBASIC1.57□□□□□ -2.16
CHGBP05060 RNU6-267P-201ENST00000516714 103 ntBASIC1.57□□□□□ -2.16
CHGBP05060 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CHGBP05060 RNU6-403P-201ENST00000363163 104 ntBASIC1.56□□□□□ -2.16
CHGBP05060 RNY1P2-201ENST00000364820 117 ntBASIC1.56□□□□□ -2.16
CHGBP05060 RNY1P4-201ENST00000384595 115 ntBASIC1.56□□□□□ -2.16
CHGBP05060 MIR181B2-201ENST00000385004 89 ntBASIC1.56□□□□□ -2.16
CHGBP05060 MT-TN-201ENST00000387400 73 ntBASIC1.56□□□□□ -2.16
CHGBP05060 RNU6-613P-201ENST00000410412 108 ntBASIC1.56□□□□□ -2.16
CHGBP05060 Y_RNA.609-201ENST00000410669 89 ntBASIC1.56□□□□□ -2.16
CHGBP05060 RNU6-592P-201ENST00000411333 103 ntBASIC1.56□□□□□ -2.16
CHGBP05060 SNORD83.1-201ENST00000411362 77 ntBASIC1.56□□□□□ -2.16
CHGBP05060 SNORA31.2-201ENST00000516019 134 ntBASIC1.56□□□□□ -2.16
CHGBP05060 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.56□□□□□ -2.16
CHGBP05060 AC020891.4-201ENST00000605745 93 ntBASIC1.56□□□□□ -2.16
CHGBP05060 SNORD116-22-201ENST00000384430 92 ntBASIC1.55□□□□□ -2.16
CHGBP05060 SNORA40.6-201ENST00000391153 128 ntBASIC1.55□□□□□ -2.16
CHGBP05060 RNU6-321P-201ENST00000410912 106 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms