Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC005520.4-201ENST00000604337 90 ntBASIC-1.84□□□□□ -2.7
APOBP04114 RNU6-899P-201ENST00000363947 107 ntBASIC-1.84□□□□□ -2.7
APOBP04114 RNU6-608P-201ENST00000383927 104 ntBASIC-1.84□□□□□ -2.7
APOBP04114 AP000720.1-201ENST00000625091 483 ntBASIC-1.84□□□□□ -2.7
APOBP04114 MTCYBP36-201ENST00000404146 440 ntBASIC-1.84□□□□□ -2.7
APOBP04114 RNU6-559P-201ENST00000516151 98 ntBASIC-1.84□□□□□ -2.7
APOBP04114 RNU6-647P-201ENST00000364243 107 ntBASIC-1.84□□□□□ -2.7
APOBP04114 RNU6-144P-201ENST00000383951 107 ntBASIC-1.84□□□□□ -2.7
APOBP04114 RNY1P6-201ENST00000384193 109 ntBASIC-1.84□□□□□ -2.7
APOBP04114 RNU6-723P-201ENST00000383973 107 ntBASIC-1.85□□□□□ -2.71
APOBP04114 RNU6-790P-201ENST00000384479 105 ntBASIC-1.85□□□□□ -2.71
APOBP04114 SNORD77B-201ENST00000391112 67 ntBASIC-1.85□□□□□ -2.71
APOBP04114 AL161932.1-201ENST00000437408 146 ntBASIC-1.85□□□□□ -2.71
APOBP04114 SNORD18C-201ENST00000362704 69 ntBASIC-1.85□□□□□ -2.71
APOBP04114 RNU6-682P-201ENST00000363843 106 ntBASIC-1.85□□□□□ -2.71
APOBP04114 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.85□□□□□ -2.71
APOBP04114 MIR548AE2-201ENST00000583456 67 ntBASIC-1.85□□□□□ -2.71
APOBP04114 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.85□□□□□ -2.71
APOBP04114 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.85□□□□□ -2.71
APOBP04114 EIF1P2-201ENST00000428233 350 ntBASIC-1.85□□□□□ -2.71
APOBP04114 RNU7-106P-201ENST00000459514 67 ntBASIC-1.85□□□□□ -2.71
APOBP04114 MIR4696-201ENST00000581431 70 ntBASIC-1.85□□□□□ -2.71
APOBP04114 AP003357.1-201ENST00000604497 148 ntBASIC-1.85□□□□□ -2.71
APOBP04114 SEPT14P8-201ENST00000508026 178 ntBASIC-1.86□□□□□ -2.71
APOBP04114 SNORD36A-201ENST00000362874 73 ntBASIC-1.86□□□□□ -2.71
APOBP04114 RNU6-481P-201ENST00000384194 107 ntBASIC-1.86□□□□□ -2.71
APOBP04114 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.86□□□□□ -2.71
APOBP04114 AL353193.1-201ENST00000421444 268 ntBASIC-1.86□□□□□ -2.71
APOBP04114 U2.17-201ENST00000611454 95 ntBASIC-1.86□□□□□ -2.71
APOBP04114 RNU6-792P-201ENST00000363490 107 ntBASIC-1.86□□□□□ -2.71
APOBP04114 RNU6-472P-201ENST00000384299 107 ntBASIC-1.86□□□□□ -2.71
APOBP04114 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.86□□□□□ -2.71
APOBP04114 RNU6-883P-201ENST00000384597 107 ntBASIC-1.86□□□□□ -2.71
APOBP04114 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.87□□□□□ -2.71
APOBP04114 AL160004.2-201ENST00000432935 350 ntBASIC-1.87□□□□□ -2.71
APOBP04114 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.87□□□□□ -2.71
APOBP04114 AC006566.1-201ENST00000608943 513 ntBASIC-1.87□□□□□ -2.71
APOBP04114 TRDV1-202ENST00000621643 102 ntBASIC-1.87□□□□□ -2.71
APOBP04114 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.87□□□□□ -2.71
APOBP04114 MIR521-2-201ENST00000384818 87 ntBASIC-1.87□□□□□ -2.71
APOBP04114 AL158063.1-201ENST00000615349 536 ntBASIC-1.87□□□□□ -2.71
APOBP04114 SEPT14P19-203ENST00000633205 211 ntBASIC-1.87□□□□□ -2.71
APOBP04114 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.87□□□□□ -2.71
APOBP04114 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.87□□□□□ -2.71
APOBP04114 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.87□□□□□ -2.71
APOBP04114 RNU6-935P-201ENST00000410371 100 ntBASIC-1.87□□□□□ -2.71
APOBP04114 RNU6-912P-201ENST00000363800 104 ntBASIC-1.88□□□□□ -2.71
APOBP04114 RNU6-106P-201ENST00000384405 107 ntBASIC-1.88□□□□□ -2.71
APOBP04114 MTND1P2-201ENST00000430604 821 ntBASIC-1.88□□□□□ -2.71
APOBP04114 MTCO2P30-201ENST00000503662 364 ntBASIC-1.88□□□□□ -2.71
APOBP04114 RNU6-75P-201ENST00000515944 104 ntBASIC-1.88□□□□□ -2.71
APOBP04114 RNU6-433P-201ENST00000363216 104 ntBASIC-1.88□□□□□ -2.71
APOBP04114 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.88□□□□□ -2.71
APOBP04114 AL021707.8-201ENST00000609428 183 ntBASIC-1.88□□□□□ -2.71
APOBP04114 AC013734.1-201ENST00000619329 111 ntBASIC-1.88□□□□□ -2.71
APOBP04114 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.88□□□□□ -2.71
APOBP04114 MIR2355-201ENST00000517199 87 ntBASIC-1.88□□□□□ -2.71
APOBP04114 AL512427.1-201ENST00000618593 349 ntBASIC-1.88□□□□□ -2.71
APOBP04114 U6.100-201ENST00000636230 99 ntBASIC-1.88□□□□□ -2.71
APOBP04114 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.89□□□□□ -2.71
APOBP04114 RNU6-606P-201ENST00000384721 111 ntBASIC-1.89□□□□□ -2.71
APOBP04114 RNU7-88P-201ENST00000458752 63 ntBASIC-1.89□□□□□ -2.71
APOBP04114 RNU6-470P-201ENST00000515954 104 ntBASIC-1.89□□□□□ -2.71
APOBP04114 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.89□□□□□ -2.71
APOBP04114 MIR4724-201ENST00000579485 89 ntBASIC-1.89□□□□□ -2.71
APOBP04114 MIR16-2-201ENST00000362117 81 ntBASIC-1.89□□□□□ -2.71
APOBP04114 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.89□□□□□ -2.71
APOBP04114 AL590623.1-201ENST00000427864 105 ntBASIC-1.89□□□□□ -2.71
APOBP04114 MIR5197-201ENST00000583721 112 ntBASIC-1.89□□□□□ -2.71
APOBP04114 AC005357.1-201ENST00000588399 301 ntBASIC-1.89□□□□□ -2.71
APOBP04114 AC006504.6-201ENST00000590142 199 ntBASIC-1.89□□□□□ -2.71
APOBP04114 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.89□□□□□ -2.71
APOBP04114 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.89□□□□□ -2.71
APOBP04114 AL158211.2-201ENST00000607282 395 ntBASIC-1.89□□□□□ -2.71
APOBP04114 MIR6841-201ENST00000637129 72 ntBASIC-1.89□□□□□ -2.71
APOBP04114 MIR369-201ENST00000362155 70 ntBASIC-1.9□□□□□ -2.71
APOBP04114 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.9□□□□□ -2.71
APOBP04114 MIR516A2-201ENST00000384888 90 ntBASIC-1.9□□□□□ -2.71
APOBP04114 MIR516A1-201ENST00000385033 90 ntBASIC-1.9□□□□□ -2.71
APOBP04114 RNU6-807P-201ENST00000516805 107 ntBASIC-1.9□□□□□ -2.71
APOBP04114 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.9□□□□□ -2.71
APOBP04114 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.9□□□□□ -2.71
APOBP04114 MIR548AG1-201ENST00000579932 66 ntBASIC-1.9□□□□□ -2.71
APOBP04114 AC099654.14-201ENST00000638599 341 ntBASIC-1.9□□□□□ -2.71
APOBP04114 RNU6-478P-201ENST00000363904 110 ntBASIC-1.9□□□□□ -2.71
APOBP04114 RNU6-132P-201ENST00000383863 107 ntBASIC-1.9□□□□□ -2.71
APOBP04114 RNU6-458P-201ENST00000384179 107 ntBASIC-1.9□□□□□ -2.71
APOBP04114 SNORD12B-201ENST00000410433 91 ntBASIC-1.9□□□□□ -2.71
APOBP04114 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.9□□□□□ -2.71
APOBP04114 U6.58-201ENST00000613107 107 ntBASIC-1.9□□□□□ -2.71
APOBP04114 RNU6-832P-201ENST00000363319 107 ntBASIC-1.9□□□□□ -2.71
APOBP04114 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.9□□□□□ -2.71
APOBP04114 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.9□□□□□ -2.71
APOBP04114 RNA5SP144-201ENST00000410846 116 ntBASIC-1.9□□□□□ -2.71
APOBP04114 MIR4307-201ENST00000582802 84 ntBASIC-1.9□□□□□ -2.71
APOBP04114 VN1R91P-201ENST00000594377 169 ntBASIC-1.9□□□□□ -2.71
APOBP04114 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.91□□□□□ -2.71
APOBP04114 SNORA19.1-201ENST00000410656 129 ntBASIC-1.91□□□□□ -2.71
APOBP04114 RNU2-55P-201ENST00000411146 174 ntBASIC-1.91□□□□□ -2.71
APOBP04114 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.91□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms