Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.44□□□□□ -2.48
MT-ND4P03905 MIR148A-201ENST00000362215 68 ntBASIC-0.45□□□□□ -2.48
MT-ND4P03905 RNU6-238P-201ENST00000363313 106 ntBASIC-0.45□□□□□ -2.48
MT-ND4P03905 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.45□□□□□ -2.48
MT-ND4P03905 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.45□□□□□ -2.48
MT-ND4P03905 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.45□□□□□ -2.48
MT-ND4P03905 SNORA25.13-201ENST00000516395 103 ntBASIC-0.45□□□□□ -2.48
MT-ND4P03905 MIR3920-201ENST00000581751 86 ntBASIC-0.45□□□□□ -2.48
MT-ND4P03905 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 RNU6-639P-201ENST00000384074 107 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 RNU6-472P-201ENST00000384299 107 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 MIR206-201ENST00000384872 86 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 MIR516B1-201ENST00000385211 90 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 AC109327.2-201ENST00000448339 378 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 RNU7-48P-201ENST00000458875 63 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 RNU6-320P-201ENST00000516511 106 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 RNA5SP480-201ENST00000516840 109 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 MIR3666-201ENST00000607845 111 ntBASIC-0.46□□□□□ -2.48
MT-ND4P03905 SNORD49B-201ENST00000365172 72 ntBASIC-0.47□□□□□ -2.48
MT-ND4P03905 MTATP8P1-201ENST00000467115 207 ntBASIC-0.47□□□□□ -2.48
MT-ND4P03905 RNU6-240P-201ENST00000516098 97 ntBASIC-0.47□□□□□ -2.48
MT-ND4P03905 MIR4645-201ENST00000583158 77 ntBASIC-0.47□□□□□ -2.48
MT-ND4P03905 MIR8064-201ENST00000612863 90 ntBASIC-0.47□□□□□ -2.48
MT-ND4P03905 U6.104-201ENST00000637979 90 ntBASIC-0.47□□□□□ -2.48
MT-ND4P03905 RNY4P28-201ENST00000365281 93 ntBASIC-0.48□□□□□ -2.49
MT-ND4P03905 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.48□□□□□ -2.49
MT-ND4P03905 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.48□□□□□ -2.49
MT-ND4P03905 RNA5SP300-201ENST00000391197 107 ntBASIC-0.48□□□□□ -2.49
MT-ND4P03905 RNU4-69P-201ENST00000410677 143 ntBASIC-0.48□□□□□ -2.49
MT-ND4P03905 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.48□□□□□ -2.49
MT-ND4P03905 RNU7-195P-201ENST00000458793 62 ntBASIC-0.48□□□□□ -2.49
MT-ND4P03905 MTND1P19-201ENST00000511780 315 ntBASIC-0.48□□□□□ -2.49
MT-ND4P03905 AC138907.4-201ENST00000570107 226 ntBASIC-0.48□□□□□ -2.49
MT-ND4P03905 MIR4308-201ENST00000580634 81 ntBASIC-0.48□□□□□ -2.49
MT-ND4P03905 AC021443.1-201ENST00000604478 211 ntBASIC-0.48□□□□□ -2.49
MT-ND4P03905 AC011603.4-201ENST00000611325 277 ntBASIC-0.48□□□□□ -2.49
MT-ND4P03905 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.49□□□□□ -2.49
MT-ND4P03905 RNA5SP275-201ENST00000363936 118 ntBASIC-0.49□□□□□ -2.49
MT-ND4P03905 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.49□□□□□ -2.49
MT-ND4P03905 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.49□□□□□ -2.49
MT-ND4P03905 RNU6-275P-201ENST00000364910 107 ntBASIC-0.49□□□□□ -2.49
MT-ND4P03905 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.49□□□□□ -2.49
MT-ND4P03905 MIR548I2-201ENST00000408348 149 ntBASIC-0.49□□□□□ -2.49
MT-ND4P03905 SNORD63B-201ENST00000411005 70 ntBASIC-0.49□□□□□ -2.49
MT-ND4P03905 MTCYBP6-201ENST00000441810 138 ntBASIC-0.49□□□□□ -2.49
MT-ND4P03905 RNU7-164P-201ENST00000459221 62 ntBASIC-0.49□□□□□ -2.49
MT-ND4P03905 RNU7-123P-201ENST00000515911 60 ntBASIC-0.49□□□□□ -2.49
MT-ND4P03905 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.49□□□□□ -2.49
MT-ND4P03905 RNU7-13P-201ENST00000516413 62 ntBASIC-0.49□□□□□ -2.49
MT-ND4P03905 SNORD114-28-201ENST00000363610 72 ntBASIC-0.5□□□□□ -2.49
MT-ND4P03905 MIR519A1-201ENST00000385257 85 ntBASIC-0.5□□□□□ -2.49
MT-ND4P03905 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.5□□□□□ -2.49
MT-ND4P03905 RN7SL660P-201ENST00000614852 299 ntBASIC-0.5□□□□□ -2.49
MT-ND4P03905 AP001362.1-201ENST00000625165 124 ntBASIC-0.5□□□□□ -2.49
MT-ND4P03905 U6.106-201ENST00000636360 105 ntBASIC-0.5□□□□□ -2.49
MT-ND4P03905 RNU1-141P-201ENST00000364623 158 ntBASIC-0.51□□□□□ -2.49
MT-ND4P03905 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.51□□□□□ -2.49
MT-ND4P03905 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.51□□□□□ -2.49
MT-ND4P03905 RNU6-768P-201ENST00000384683 107 ntBASIC-0.51□□□□□ -2.49
MT-ND4P03905 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.51□□□□□ -2.49
MT-ND4P03905 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.51□□□□□ -2.49
MT-ND4P03905 AC244250.2-201ENST00000418731 148 ntBASIC-0.51□□□□□ -2.49
MT-ND4P03905 AC096531.1-201ENST00000419107 107 ntBASIC-0.51□□□□□ -2.49
MT-ND4P03905 MTND4LP11-201ENST00000422184 280 ntBASIC-0.51□□□□□ -2.49
MT-ND4P03905 AC009779.6-201ENST00000603972 165 ntBASIC-0.51□□□□□ -2.49
MT-ND4P03905 MIR6507-201ENST00000613630 70 ntBASIC-0.51□□□□□ -2.49
MT-ND4P03905 AL162726.3-218ENST00000636401 95 ntBASIC-0.51□□□□□ -2.49
MT-ND4P03905 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.52□□□□□ -2.49
MT-ND4P03905 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.52□□□□□ -2.49
MT-ND4P03905 RNU6-811P-201ENST00000384069 107 ntBASIC-0.52□□□□□ -2.49
MT-ND4P03905 RNU6-524P-201ENST00000384270 107 ntBASIC-0.52□□□□□ -2.49
MT-ND4P03905 RNU7-74P-201ENST00000459104 62 ntBASIC-0.52□□□□□ -2.49
MT-ND4P03905 RNA5SP285-201ENST00000516619 119 ntBASIC-0.52□□□□□ -2.49
MT-ND4P03905 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.52□□□□□ -2.49
MT-ND4P03905 MTND5P40-201ENST00000559945 246 ntBASIC-0.52□□□□□ -2.49
MT-ND4P03905 MIR4473-201ENST00000583731 91 ntBASIC-0.52□□□□□ -2.49
MT-ND4P03905 MIR655-201ENST00000362159 97 ntBASIC-0.53□□□□□ -2.49
MT-ND4P03905 RNU6-170P-201ENST00000362832 104 ntBASIC-0.53□□□□□ -2.49
MT-ND4P03905 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.53□□□□□ -2.49
MT-ND4P03905 RNA5SP257-201ENST00000363023 116 ntBASIC-0.53□□□□□ -2.49
MT-ND4P03905 RNU6-818P-201ENST00000364837 108 ntBASIC-0.53□□□□□ -2.49
MT-ND4P03905 U8.6-201ENST00000364939 135 ntBASIC-0.53□□□□□ -2.49
MT-ND4P03905 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.53□□□□□ -2.49
MT-ND4P03905 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.53□□□□□ -2.49
MT-ND4P03905 RNU2-38P-201ENST00000410856 79 ntBASIC-0.53□□□□□ -2.49
MT-ND4P03905 RNU7-2P-201ENST00000516096 62 ntBASIC-0.53□□□□□ -2.49
MT-ND4P03905 MIR4788-201ENST00000639104 80 ntBASIC-0.53□□□□□ -2.49
MT-ND4P03905 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.54□□□□□ -2.5
MT-ND4P03905 SNORD14C-201ENST00000365382 88 ntBASIC-0.54□□□□□ -2.5
MT-ND4P03905 SNORD77B-201ENST00000391112 67 ntBASIC-0.54□□□□□ -2.5
MT-ND4P03905 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.54□□□□□ -2.5
MT-ND4P03905 MTATP6P21-201ENST00000440681 189 ntBASIC-0.54□□□□□ -2.5
MT-ND4P03905 RNU7-106P-201ENST00000459514 67 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms