Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.51□□□□□ -2.49
MT-ND3P03897 CR383656.4-201ENST00000546909 122 ntBASIC-0.51□□□□□ -2.49
MT-ND3P03897 MIR8064-201ENST00000612863 90 ntBASIC-0.51□□□□□ -2.49
MT-ND3P03897 RN7SL660P-201ENST00000614852 299 ntBASIC-0.51□□□□□ -2.49
MT-ND3P03897 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.51□□□□□ -2.49
MT-ND3P03897 SNORA25.7-201ENST00000364375 127 ntBASIC-0.52□□□□□ -2.49
MT-ND3P03897 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.52□□□□□ -2.49
MT-ND3P03897 SNORD41.1-201ENST00000391000 69 ntBASIC-0.52□□□□□ -2.49
MT-ND3P03897 MIR1270-201ENST00000459320 83 ntBASIC-0.52□□□□□ -2.49
MT-ND3P03897 MIR4473-201ENST00000583731 91 ntBASIC-0.52□□□□□ -2.49
MT-ND3P03897 SNORD114-11-201ENST00000363738 75 ntBASIC-0.53□□□□□ -2.49
MT-ND3P03897 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.53□□□□□ -2.49
MT-ND3P03897 U8.6-201ENST00000364939 135 ntBASIC-0.53□□□□□ -2.49
MT-ND3P03897 RNA5SP300-201ENST00000391197 107 ntBASIC-0.53□□□□□ -2.49
MT-ND3P03897 MIR876-201ENST00000401147 81 ntBASIC-0.53□□□□□ -2.49
MT-ND3P03897 MIR548AE2-201ENST00000583456 67 ntBASIC-0.53□□□□□ -2.49
MT-ND3P03897 MIR6507-201ENST00000613630 70 ntBASIC-0.53□□□□□ -2.49
MT-ND3P03897 MIR4788-201ENST00000639104 80 ntBASIC-0.53□□□□□ -2.49
MT-ND3P03897 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.53□□□□□ -2.49
MT-ND3P03897 MIR599-201ENST00000385069 95 ntBASIC-0.54□□□□□ -2.5
MT-ND3P03897 RNU6-578P-201ENST00000390980 103 ntBASIC-0.54□□□□□ -2.5
MT-ND3P03897 RNU6-985P-201ENST00000410182 104 ntBASIC-0.54□□□□□ -2.5
MT-ND3P03897 RNA5SP451-201ENST00000410588 110 ntBASIC-0.54□□□□□ -2.5
MT-ND3P03897 MIR655-201ENST00000362159 97 ntBASIC-0.55□□□□□ -2.5
MT-ND3P03897 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.55□□□□□ -2.5
MT-ND3P03897 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.55□□□□□ -2.5
MT-ND3P03897 MIR3171-201ENST00000584270 74 ntBASIC-0.55□□□□□ -2.5
MT-ND3P03897 MIR3666-201ENST00000607845 111 ntBASIC-0.55□□□□□ -2.5
MT-ND3P03897 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.55□□□□□ -2.5
MT-ND3P03897 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.56□□□□□ -2.5
MT-ND3P03897 RNU6-509P-201ENST00000363519 107 ntBASIC-0.56□□□□□ -2.5
MT-ND3P03897 RNA5SP205-201ENST00000364653 136 ntBASIC-0.56□□□□□ -2.5
MT-ND3P03897 RNU6-811P-201ENST00000384069 107 ntBASIC-0.56□□□□□ -2.5
MT-ND3P03897 RNU6-480P-201ENST00000384332 107 ntBASIC-0.56□□□□□ -2.5
MT-ND3P03897 MIR635-201ENST00000384830 98 ntBASIC-0.56□□□□□ -2.5
MT-ND3P03897 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.56□□□□□ -2.5
MT-ND3P03897 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.56□□□□□ -2.5
MT-ND3P03897 RNA5SP368-201ENST00000364298 116 ntBASIC-0.57□□□□□ -2.5
MT-ND3P03897 SNORA25.13-201ENST00000516395 103 ntBASIC-0.57□□□□□ -2.5
MT-ND3P03897 RNU7-188P-201ENST00000517063 64 ntBASIC-0.57□□□□□ -2.5
MT-ND3P03897 MIR4500-201ENST00000579472 76 ntBASIC-0.57□□□□□ -2.5
MT-ND3P03897 AL162726.3-218ENST00000636401 95 ntBASIC-0.57□□□□□ -2.5
MT-ND3P03897 MIR148A-201ENST00000362215 68 ntBASIC-0.58□□□□□ -2.5
MT-ND3P03897 RNA5SP275-201ENST00000363936 118 ntBASIC-0.58□□□□□ -2.5
MT-ND3P03897 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.58□□□□□ -2.5
MT-ND3P03897 RNU6-449P-201ENST00000383914 107 ntBASIC-0.58□□□□□ -2.5
MT-ND3P03897 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.58□□□□□ -2.5
MT-ND3P03897 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.58□□□□□ -2.5
MT-ND3P03897 MIR196A2-201ENST00000385189 110 ntBASIC-0.58□□□□□ -2.5
MT-ND3P03897 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.58□□□□□ -2.5
MT-ND3P03897 MTND4LP11-201ENST00000422184 280 ntBASIC-0.58□□□□□ -2.5
MT-ND3P03897 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.58□□□□□ -2.5
MT-ND3P03897 AC108676.2-201ENST00000605225 163 ntBASIC-0.58□□□□□ -2.5
MT-ND3P03897 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.59□□□□□ -2.5
MT-ND3P03897 RNU6-643P-201ENST00000384018 107 ntBASIC-0.59□□□□□ -2.5
MT-ND3P03897 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.59□□□□□ -2.5
MT-ND3P03897 MIR1302-6-201ENST00000408466 90 ntBASIC-0.59□□□□□ -2.5
MT-ND3P03897 RNU7-195P-201ENST00000458793 62 ntBASIC-0.59□□□□□ -2.5
MT-ND3P03897 SNORD126-201ENST00000459475 77 ntBASIC-0.59□□□□□ -2.5
MT-ND3P03897 RNU2-35P-201ENST00000516446 142 ntBASIC-0.59□□□□□ -2.5
MT-ND3P03897 MIR3920-201ENST00000581751 86 ntBASIC-0.59□□□□□ -2.5
MT-ND3P03897 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.59□□□□□ -2.5
MT-ND3P03897 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.6□□□□□ -2.51
MT-ND3P03897 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.6□□□□□ -2.51
MT-ND3P03897 AC096531.1-201ENST00000419107 107 ntBASIC-0.6□□□□□ -2.51
MT-ND3P03897 AC109327.2-201ENST00000448339 378 ntBASIC-0.6□□□□□ -2.51
MT-ND3P03897 AL590491.3-201ENST00000610731 82 ntBASIC-0.6□□□□□ -2.51
MT-ND3P03897 AC011603.4-201ENST00000611325 277 ntBASIC-0.6□□□□□ -2.51
MT-ND3P03897 SNORD114-15-201ENST00000364687 72 ntBASIC-0.61□□□□□ -2.51
MT-ND3P03897 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.61□□□□□ -2.51
MT-ND3P03897 RNU6-639P-201ENST00000384074 107 ntBASIC-0.61□□□□□ -2.51
MT-ND3P03897 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.61□□□□□ -2.51
MT-ND3P03897 AC097635.1-201ENST00000450678 155 ntBASIC-0.61□□□□□ -2.51
MT-ND3P03897 snoU13.19-201ENST00000459148 104 ntBASIC-0.61□□□□□ -2.51
MT-ND3P03897 AC114755.3-201ENST00000481111 251 ntBASIC-0.61□□□□□ -2.51
MT-ND3P03897 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.61□□□□□ -2.51
MT-ND3P03897 MIR548AG2-201ENST00000581228 64 ntBASIC-0.61□□□□□ -2.51
MT-ND3P03897 MIR548AE1-201ENST00000583292 70 ntBASIC-0.61□□□□□ -2.51
MT-ND3P03897 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.62□□□□□ -2.51
MT-ND3P03897 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.62□□□□□ -2.51
MT-ND3P03897 RNU6-690P-201ENST00000365242 106 ntBASIC-0.62□□□□□ -2.51
MT-ND3P03897 RPS29P8-201ENST00000445109 171 ntBASIC-0.62□□□□□ -2.51
MT-ND3P03897 RNU7-74P-201ENST00000459104 62 ntBASIC-0.62□□□□□ -2.51
MT-ND3P03897 RNY3P16-201ENST00000516338 101 ntBASIC-0.62□□□□□ -2.51
MT-ND3P03897 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.62□□□□□ -2.51
MT-ND3P03897 AC020661.2-201ENST00000560114 134 ntBASIC-0.62□□□□□ -2.51
MT-ND3P03897 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.63□□□□□ -2.51
MT-ND3P03897 RNY4P3-201ENST00000365254 95 ntBASIC-0.63□□□□□ -2.51
MT-ND3P03897 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.63□□□□□ -2.51
MT-ND3P03897 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.63□□□□□ -2.51
MT-ND3P03897 RNU6-524P-201ENST00000384270 107 ntBASIC-0.63□□□□□ -2.51
MT-ND3P03897 RNU1-141P-201ENST00000364623 158 ntBASIC-0.64□□□□□ -2.51
MT-ND3P03897 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.64□□□□□ -2.51
MT-ND3P03897 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.64□□□□□ -2.51
MT-ND3P03897 MIR206-201ENST00000384872 86 ntBASIC-0.64□□□□□ -2.51
MT-ND3P03897 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
MT-ND3P03897 RNU6-284P-201ENST00000411105 106 ntBASIC-0.64□□□□□ -2.51
MT-ND3P03897 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.64□□□□□ -2.51
MT-ND3P03897 SNORD95.1-201ENST00000364099 68 ntBASIC-0.65□□□□□ -2.51
MT-ND3P03897 SNORD14C-201ENST00000365382 88 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 214.3 ms