Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 Y_RNA.773-201ENST00000607168 90 ntBASIC0.43□□□□□ -2.34
MT-ND1P03886 MIR8070-201ENST00000616510 88 ntBASIC0.43□□□□□ -2.34
MT-ND1P03886 RNU6-235P-201ENST00000362644 107 ntBASIC0.42□□□□□ -2.34
MT-ND1P03886 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
MT-ND1P03886 RNU6-647P-201ENST00000364243 107 ntBASIC0.42□□□□□ -2.34
MT-ND1P03886 RNA5SP517-201ENST00000364724 117 ntBASIC0.42□□□□□ -2.34
MT-ND1P03886 RNU4-45P-201ENST00000365469 141 ntBASIC0.42□□□□□ -2.34
MT-ND1P03886 RNY1P5-201ENST00000383890 115 ntBASIC0.42□□□□□ -2.34
MT-ND1P03886 RNU6-535P-201ENST00000384722 107 ntBASIC0.42□□□□□ -2.34
MT-ND1P03886 MIR1263-201ENST00000408324 86 ntBASIC0.42□□□□□ -2.34
MT-ND1P03886 Y_RNA.697-201ENST00000516776 113 ntBASIC0.42□□□□□ -2.34
MT-ND1P03886 DEFB131E-201ENST00000532329 154 ntBASIC0.42□□□□□ -2.34
MT-ND1P03886 SNORA36.1-201ENST00000363424 132 ntBASIC0.41□□□□□ -2.34
MT-ND1P03886 Y_RNA.191-201ENST00000363972 113 ntBASIC0.41□□□□□ -2.34
MT-ND1P03886 RNY1P2-201ENST00000364820 117 ntBASIC0.41□□□□□ -2.34
MT-ND1P03886 Y_RNA.448-201ENST00000384185 108 ntBASIC0.41□□□□□ -2.34
MT-ND1P03886 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.41□□□□□ -2.34
MT-ND1P03886 AC092628.1-201ENST00000436250 252 ntBASIC0.41□□□□□ -2.34
MT-ND1P03886 RNU7-6P-201ENST00000516845 62 ntBASIC0.41□□□□□ -2.34
MT-ND1P03886 RNA5SP347-201ENST00000362445 119 ntBASIC0.4□□□□□ -2.35
MT-ND1P03886 RNU4-58P-201ENST00000363192 141 ntBASIC0.4□□□□□ -2.35
MT-ND1P03886 SNORA63.5-201ENST00000363548 123 ntBASIC0.4□□□□□ -2.35
MT-ND1P03886 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
MT-ND1P03886 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
MT-ND1P03886 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
MT-ND1P03886 RNU7-2P-201ENST00000516096 62 ntBASIC0.4□□□□□ -2.35
MT-ND1P03886 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
MT-ND1P03886 RNU6-1234P-201ENST00000516877 103 ntBASIC0.4□□□□□ -2.35
MT-ND1P03886 MIR4452-201ENST00000583004 71 ntBASIC0.4□□□□□ -2.35
MT-ND1P03886 MIR6788-201ENST00000618842 66 ntBASIC0.4□□□□□ -2.35
MT-ND1P03886 Y_RNA.198-201ENST00000364013 98 ntBASIC0.39□□□□□ -2.35
MT-ND1P03886 SNORD115-35-201ENST00000365122 82 ntBASIC0.39□□□□□ -2.35
MT-ND1P03886 MIRLET7F2-201ENST00000385277 83 ntBASIC0.39□□□□□ -2.35
MT-ND1P03886 SNORD77B-201ENST00000391112 67 ntBASIC0.39□□□□□ -2.35
MT-ND1P03886 MIR548J-201ENST00000408833 112 ntBASIC0.39□□□□□ -2.35
MT-ND1P03886 AC098934.3-201ENST00000430450 190 ntBASIC0.39□□□□□ -2.35
MT-ND1P03886 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.39□□□□□ -2.35
MT-ND1P03886 RNU7-48P-201ENST00000458875 63 ntBASIC0.39□□□□□ -2.35
MT-ND1P03886 RNU6-1194P-201ENST00000516208 104 ntBASIC0.39□□□□□ -2.35
MT-ND1P03886 AC092634.7-201ENST00000621022 103 ntBASIC0.39□□□□□ -2.35
MT-ND1P03886 RNU6-774P-201ENST00000363238 107 ntBASIC0.38□□□□□ -2.35
MT-ND1P03886 Y_RNA.174-201ENST00000363781 105 ntBASIC0.38□□□□□ -2.35
MT-ND1P03886 Y_RNA.343-201ENST00000365354 112 ntBASIC0.38□□□□□ -2.35
MT-ND1P03886 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
MT-ND1P03886 Y_RNA.528-201ENST00000384575 108 ntBASIC0.38□□□□□ -2.35
MT-ND1P03886 Y_RNA.567-201ENST00000384736 106 ntBASIC0.38□□□□□ -2.35
MT-ND1P03886 SNORA40-201ENST00000388090 126 ntBASIC0.38□□□□□ -2.35
MT-ND1P03886 RNA5SP136-201ENST00000410906 107 ntBASIC0.38□□□□□ -2.35
MT-ND1P03886 Y_RNA.630-201ENST00000411370 108 ntBASIC0.38□□□□□ -2.35
MT-ND1P03886 MIR3124-201ENST00000582636 67 ntBASIC0.38□□□□□ -2.35
MT-ND1P03886 SNORA25.18-201ENST00000607153 114 ntBASIC0.38□□□□□ -2.35
MT-ND1P03886 TUG1_4.1-201ENST00000619464 181 ntBASIC0.38□□□□□ -2.35
MT-ND1P03886 MIR1255B1-201ENST00000636325 63 ntBASIC0.38□□□□□ -2.35
MT-ND1P03886 Y_RNA.4-201ENST00000362333 112 ntBASIC0.37□□□□□ -2.35
MT-ND1P03886 SNORD115-19-201ENST00000363098 82 ntBASIC0.37□□□□□ -2.35
MT-ND1P03886 SNORD115-18-201ENST00000363293 82 ntBASIC0.37□□□□□ -2.35
MT-ND1P03886 SNORD115-17-201ENST00000364612 82 ntBASIC0.37□□□□□ -2.35
MT-ND1P03886 SNORA8.2-201ENST00000384372 139 ntBASIC0.37□□□□□ -2.35
MT-ND1P03886 Y_RNA.525-201ENST00000384570 113 ntBASIC0.37□□□□□ -2.35
MT-ND1P03886 RNU6-429P-201ENST00000384582 108 ntBASIC0.37□□□□□ -2.35
MT-ND1P03886 Y_RNA.586-201ENST00000391146 98 ntBASIC0.37□□□□□ -2.35
MT-ND1P03886 MIR4500-201ENST00000579472 76 ntBASIC0.37□□□□□ -2.35
MT-ND1P03886 MIR3163-201ENST00000581592 73 ntBASIC0.37□□□□□ -2.35
MT-ND1P03886 MIR3133-201ENST00000583157 78 ntBASIC0.37□□□□□ -2.35
MT-ND1P03886 MIR376B-201ENST00000614515 100 ntBASIC0.37□□□□□ -2.35
MT-ND1P03886 MIR5087-201ENST00000635826 76 ntBASIC0.37□□□□□ -2.35
MT-ND1P03886 Y_RNA.127-201ENST00000363386 109 ntBASIC0.36□□□□□ -2.35
MT-ND1P03886 SNORD118-201ENST00000363593 134 ntBASIC0.36□□□□□ -2.35
MT-ND1P03886 SNORA25.9-201ENST00000365087 128 ntBASIC0.36□□□□□ -2.35
MT-ND1P03886 Y_RNA.328-201ENST00000365208 113 ntBASIC0.36□□□□□ -2.35
MT-ND1P03886 SNORD58C-201ENST00000365223 64 ntBASIC0.36□□□□□ -2.35
MT-ND1P03886 MIR518A1-201ENST00000385068 85 ntBASIC0.36□□□□□ -2.35
MT-ND1P03886 RNU6-1211P-201ENST00000459179 105 ntBASIC0.36□□□□□ -2.35
MT-ND1P03886 RNU6-1061P-201ENST00000516530 99 ntBASIC0.36□□□□□ -2.35
MT-ND1P03886 RNU6-971P-201ENST00000516920 106 ntBASIC0.36□□□□□ -2.35
MT-ND1P03886 RNA5SP47-201ENST00000517230 109 ntBASIC0.36□□□□□ -2.35
MT-ND1P03886 MIR5000-201ENST00000577717 103 ntBASIC0.36□□□□□ -2.35
MT-ND1P03886 MIR151B-201ENST00000584249 96 ntBASIC0.36□□□□□ -2.35
MT-ND1P03886 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
MT-ND1P03886 MIR101-2-201ENST00000362195 79 ntBASIC0.35□□□□□ -2.35
MT-ND1P03886 Y_RNA.56-201ENST00000362798 112 ntBASIC0.35□□□□□ -2.35
MT-ND1P03886 Y_RNA.98-201ENST00000363109 102 ntBASIC0.35□□□□□ -2.35
MT-ND1P03886 SNORD28-201ENST00000384706 75 ntBASIC0.35□□□□□ -2.35
MT-ND1P03886 SNORA40.8-201ENST00000411034 126 ntBASIC0.35□□□□□ -2.35
MT-ND1P03886 BX276092.1-201ENST00000427368 251 ntBASIC0.35□□□□□ -2.35
MT-ND1P03886 RNU7-107P-201ENST00000459121 61 ntBASIC0.35□□□□□ -2.35
MT-ND1P03886 RNU6-469P-201ENST00000516253 101 ntBASIC0.35□□□□□ -2.35
MT-ND1P03886 RNU6-521P-201ENST00000516663 105 ntBASIC0.35□□□□□ -2.35
MT-ND1P03886 AC025166.1-201ENST00000612411 163 ntBASIC0.35□□□□□ -2.35
MT-ND1P03886 MTND5P18-201ENST00000445624 1801 ntBASIC0.34□□□□□ -2.35
MT-ND1P03886 MIRLET7D-201ENST00000362263 87 ntBASIC0.34□□□□□ -2.36
MT-ND1P03886 SNORD44.1-201ENST00000363202 61 ntBASIC0.34□□□□□ -2.36
MT-ND1P03886 Y_RNA.213-201ENST00000364178 111 ntBASIC0.34□□□□□ -2.36
MT-ND1P03886 RNU6-1062P-201ENST00000383908 107 ntBASIC0.34□□□□□ -2.36
MT-ND1P03886 MIR34C-201ENST00000384831 77 ntBASIC0.34□□□□□ -2.36
MT-ND1P03886 SUMO1P3-201ENST00000439961 304 ntBASIC0.34□□□□□ -2.36
MT-ND1P03886 TRAJ51-201ENST00000504127 63 ntBASIC0.34□□□□□ -2.36
MT-ND1P03886 AC244669.1-204ENST00000621564 178 ntBASIC0.34□□□□□ -2.36
MT-ND1P03886 AP001362.1-201ENST00000625165 124 ntBASIC0.34□□□□□ -2.36
MT-ND1P03886 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 227.4 ms