Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 U4.1-201ENST00000620349 87 ntBASIC-1.59□□□□□ -2.66
APOEP02649 RNU6-845P-201ENST00000362578 103 ntBASIC-1.6□□□□□ -2.67
APOEP02649 SNORD115-25-201ENST00000362619 82 ntBASIC-1.6□□□□□ -2.67
APOEP02649 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.6□□□□□ -2.67
APOEP02649 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.6□□□□□ -2.67
APOEP02649 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.6□□□□□ -2.67
APOEP02649 RNU6-211P-201ENST00000384047 107 ntBASIC-1.6□□□□□ -2.67
APOEP02649 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.6□□□□□ -2.67
APOEP02649 MIR1277-201ENST00000408536 78 ntBASIC-1.6□□□□□ -2.67
APOEP02649 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.6□□□□□ -2.67
APOEP02649 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.61□□□□□ -2.67
APOEP02649 MIR206-201ENST00000384872 86 ntBASIC-1.61□□□□□ -2.67
APOEP02649 SNORD115-46-201ENST00000390982 71 ntBASIC-1.61□□□□□ -2.67
APOEP02649 SNORD22.1-201ENST00000516331 125 ntBASIC-1.61□□□□□ -2.67
APOEP02649 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.61□□□□□ -2.67
APOEP02649 AC022079.1-201ENST00000621546 602 ntBASIC-1.61□□□□□ -2.67
APOEP02649 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.62□□□□□ -2.67
APOEP02649 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.62□□□□□ -2.67
APOEP02649 RNU6-10P-201ENST00000384036 107 ntBASIC-1.62□□□□□ -2.67
APOEP02649 MIR616-201ENST00000385293 97 ntBASIC-1.62□□□□□ -2.67
APOEP02649 MIR548F1-201ENST00000408667 84 ntBASIC-1.62□□□□□ -2.67
APOEP02649 RNU6-287P-201ENST00000516230 98 ntBASIC-1.62□□□□□ -2.67
APOEP02649 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.62□□□□□ -2.67
APOEP02649 AP001362.1-201ENST00000625165 124 ntBASIC-1.62□□□□□ -2.67
APOEP02649 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.63□□□□□ -2.67
APOEP02649 RNU6-290P-201ENST00000365212 101 ntBASIC-1.63□□□□□ -2.67
APOEP02649 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.63□□□□□ -2.67
APOEP02649 MIR517B-201ENST00000385102 67 ntBASIC-1.63□□□□□ -2.67
APOEP02649 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.63□□□□□ -2.67
APOEP02649 MTND4LP30-201ENST00000454092 297 ntBASIC-1.63□□□□□ -2.67
APOEP02649 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.63□□□□□ -2.67
APOEP02649 MIR4306-201ENST00000583390 91 ntBASIC-1.63□□□□□ -2.67
APOEP02649 AC113139.1-201ENST00000605049 239 ntBASIC-1.63□□□□□ -2.67
APOEP02649 AC112487.2-201ENST00000637950 304 ntBASIC-1.63□□□□□ -2.67
APOEP02649 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.64□□□□□ -2.67
APOEP02649 SNORD116-29-201ENST00000384516 83 ntBASIC-1.64□□□□□ -2.67
APOEP02649 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.64□□□□□ -2.67
APOEP02649 SNORA79-201ENST00000408376 140 ntBASIC-1.64□□□□□ -2.67
APOEP02649 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.64□□□□□ -2.67
APOEP02649 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.65□□□□□ -2.67
APOEP02649 AC022137.1-201ENST00000483735 151 ntBASIC-1.65□□□□□ -2.67
APOEP02649 SNORA40.17-201ENST00000517256 115 ntBASIC-1.65□□□□□ -2.67
APOEP02649 MIR5704-201ENST00000584029 77 ntBASIC-1.65□□□□□ -2.67
APOEP02649 AC084782.3-201ENST00000612282 578 ntBASIC-1.65□□□□□ -2.67
APOEP02649 AC025253.1-201ENST00000613623 543 ntBASIC-1.65□□□□□ -2.67
APOEP02649 RNU1-115P-201ENST00000365329 160 ntBASIC-1.66□□□□□ -2.68
APOEP02649 RNU6-326P-201ENST00000365480 107 ntBASIC-1.66□□□□□ -2.68
APOEP02649 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.66□□□□□ -2.68
APOEP02649 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.66□□□□□ -2.68
APOEP02649 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.66□□□□□ -2.68
APOEP02649 RNY4P36-201ENST00000391116 96 ntBASIC-1.66□□□□□ -2.68
APOEP02649 RNU2-35P-201ENST00000516446 142 ntBASIC-1.66□□□□□ -2.68
APOEP02649 RNY1P9-201ENST00000532431 109 ntBASIC-1.66□□□□□ -2.68
APOEP02649 MIR3165-201ENST00000579874 75 ntBASIC-1.66□□□□□ -2.68
APOEP02649 AC037487.3-201ENST00000606668 112 ntBASIC-1.66□□□□□ -2.68
APOEP02649 AC084781.2-201ENST00000615568 161 ntBASIC-1.66□□□□□ -2.68
APOEP02649 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.67□□□□□ -2.68
APOEP02649 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.67□□□□□ -2.68
APOEP02649 RNA5SP192-201ENST00000364404 120 ntBASIC-1.67□□□□□ -2.68
APOEP02649 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.67□□□□□ -2.68
APOEP02649 MIR624-201ENST00000385217 97 ntBASIC-1.67□□□□□ -2.68
APOEP02649 SNORD64-201ENST00000386683 67 ntBASIC-1.67□□□□□ -2.68
APOEP02649 AP000533.3-201ENST00000447704 118 ntBASIC-1.67□□□□□ -2.68
APOEP02649 AC007012.1-201ENST00000567192 175 ntBASIC-1.67□□□□□ -2.68
APOEP02649 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.67□□□□□ -2.68
APOEP02649 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.68□□□□□ -2.68
APOEP02649 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.68□□□□□ -2.68
APOEP02649 RNU6-973P-201ENST00000364690 107 ntBASIC-1.68□□□□□ -2.68
APOEP02649 RNU6-431P-201ENST00000383874 107 ntBASIC-1.68□□□□□ -2.68
APOEP02649 RNU6-571P-201ENST00000384128 107 ntBASIC-1.68□□□□□ -2.68
APOEP02649 MIR516A2-201ENST00000384888 90 ntBASIC-1.68□□□□□ -2.68
APOEP02649 MIR516A1-201ENST00000385033 90 ntBASIC-1.68□□□□□ -2.68
APOEP02649 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.69□□□□□ -2.68
APOEP02649 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.69□□□□□ -2.68
APOEP02649 RNU6-978P-201ENST00000364371 103 ntBASIC-1.69□□□□□ -2.68
APOEP02649 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.69□□□□□ -2.68
APOEP02649 MIR587-201ENST00000384845 96 ntBASIC-1.69□□□□□ -2.68
APOEP02649 SNORD116-25-201ENST00000516517 92 ntBASIC-1.69□□□□□ -2.68
APOEP02649 AC009779.6-201ENST00000603972 165 ntBASIC-1.69□□□□□ -2.68
APOEP02649 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.7□□□□□ -2.68
APOEP02649 RNU6-728P-201ENST00000365375 104 ntBASIC-1.7□□□□□ -2.68
APOEP02649 RNU6-850P-201ENST00000516934 103 ntBASIC-1.7□□□□□ -2.68
APOEP02649 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.7□□□□□ -2.68
APOEP02649 MIR382-201ENST00000637119 76 ntBASIC-1.7□□□□□ -2.68
APOEP02649 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.71□□□□□ -2.68
APOEP02649 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.71□□□□□ -2.68
APOEP02649 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.71□□□□□ -2.68
APOEP02649 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.71□□□□□ -2.68
APOEP02649 RNU6-720P-201ENST00000516363 108 ntBASIC-1.71□□□□□ -2.68
APOEP02649 MIR3115-201ENST00000577915 68 ntBASIC-1.71□□□□□ -2.68
APOEP02649 RNU2-4P-201ENST00000606190 192 ntBASIC-1.71□□□□□ -2.68
APOEP02649 UBE2WP1-201ENST00000362030 340 ntBASIC-1.72□□□□□ -2.68
APOEP02649 SNORD115-35-201ENST00000365122 82 ntBASIC-1.72□□□□□ -2.68
APOEP02649 RNU6-121P-201ENST00000410525 99 ntBASIC-1.72□□□□□ -2.68
APOEP02649 RNU4-69P-201ENST00000410677 143 ntBASIC-1.72□□□□□ -2.68
APOEP02649 AC092794.1-201ENST00000612734 582 ntBASIC-1.72□□□□□ -2.68
APOEP02649 MIR376B-201ENST00000614515 100 ntBASIC-1.72□□□□□ -2.68
APOEP02649 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.73□□□□□ -2.69
APOEP02649 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.73□□□□□ -2.69
APOEP02649 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms