Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.26□□□□□ -2.45
CPSF4O95639 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.26□□□□□ -2.45
CPSF4O95639 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.26□□□□□ -2.45
CPSF4O95639 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.26□□□□□ -2.45
CPSF4O95639 MIR635-201ENST00000384830 98 ntBASIC-0.26□□□□□ -2.45
CPSF4O95639 MTND1P19-201ENST00000511780 315 ntBASIC-0.26□□□□□ -2.45
CPSF4O95639 AP001094.1-201ENST00000579805 193 ntBASIC-0.26□□□□□ -2.45
CPSF4O95639 AC044792.1-201ENST00000593294 196 ntBASIC-0.26□□□□□ -2.45
CPSF4O95639 RNU6-275P-201ENST00000364910 107 ntBASIC-0.27□□□□□ -2.45
CPSF4O95639 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.27□□□□□ -2.45
CPSF4O95639 MIR7-2-201ENST00000384970 110 ntBASIC-0.27□□□□□ -2.45
CPSF4O95639 MIR599-201ENST00000385069 95 ntBASIC-0.27□□□□□ -2.45
CPSF4O95639 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.27□□□□□ -2.45
CPSF4O95639 SNORD4A-201ENST00000459174 72 ntBASIC-0.27□□□□□ -2.45
CPSF4O95639 RNU6-320P-201ENST00000516511 106 ntBASIC-0.27□□□□□ -2.45
CPSF4O95639 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.27□□□□□ -2.45
CPSF4O95639 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.27□□□□□ -2.45
CPSF4O95639 RNU2-60P-201ENST00000517290 128 ntBASIC-0.27□□□□□ -2.45
CPSF4O95639 MIR4500-201ENST00000579472 76 ntBASIC-0.27□□□□□ -2.45
CPSF4O95639 MIR4645-201ENST00000583158 77 ntBASIC-0.27□□□□□ -2.45
CPSF4O95639 SNORA18.1-201ENST00000363418 128 ntBASIC-0.28□□□□□ -2.45
CPSF4O95639 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.28□□□□□ -2.45
CPSF4O95639 SNORD114-12-201ENST00000365400 75 ntBASIC-0.28□□□□□ -2.45
CPSF4O95639 SNORA75.1-201ENST00000391130 148 ntBASIC-0.28□□□□□ -2.45
CPSF4O95639 SNORD110-201ENST00000408189 75 ntBASIC-0.28□□□□□ -2.45
CPSF4O95639 RNU2-38P-201ENST00000410856 79 ntBASIC-0.28□□□□□ -2.45
CPSF4O95639 AC006210.1-201ENST00000424882 111 ntBASIC-0.28□□□□□ -2.45
CPSF4O95639 HMGN2P22-201ENST00000427588 175 ntBASIC-0.28□□□□□ -2.45
CPSF4O95639 RNU6-240P-201ENST00000516098 97 ntBASIC-0.28□□□□□ -2.45
CPSF4O95639 NAMPTP3-201ENST00000569273 224 ntBASIC-0.28□□□□□ -2.45
CPSF4O95639 AL670379.3-201ENST00000605040 251 ntBASIC-0.28□□□□□ -2.45
CPSF4O95639 MIR8064-201ENST00000612863 90 ntBASIC-0.28□□□□□ -2.45
CPSF4O95639 MIR6514-201ENST00000622549 70 ntBASIC-0.28□□□□□ -2.45
CPSF4O95639 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.28□□□□□ -2.45
CPSF4O95639 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 SNORD114-28-201ENST00000363610 72 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 RNU6-768P-201ENST00000384683 107 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 MIR106A-201ENST00000384870 81 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 MIR548F4-201ENST00000408515 105 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 MIR548H3-201ENST00000408771 118 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 RNU4-69P-201ENST00000410677 143 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 MTND2P23-201ENST00000422990 651 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 AC097635.1-201ENST00000450678 155 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 RNA5SP484-201ENST00000458857 111 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
CPSF4O95639 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
CPSF4O95639 AC138907.4-201ENST00000570107 226 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 AC021443.1-201ENST00000604478 211 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 AC011603.4-201ENST00000611325 277 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 U6.106-201ENST00000636360 105 ntBASIC-0.29□□□□□ -2.46
CPSF4O95639 RNU6-797P-201ENST00000363101 109 ntBASIC-0.3□□□□□ -2.46
CPSF4O95639 RNA5SP98-201ENST00000363158 137 ntBASIC-0.3□□□□□ -2.46
CPSF4O95639 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.3□□□□□ -2.46
CPSF4O95639 RNU6-865P-201ENST00000364772 107 ntBASIC-0.3□□□□□ -2.46
CPSF4O95639 RNU6-46P-201ENST00000383860 107 ntBASIC-0.3□□□□□ -2.46
CPSF4O95639 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.3□□□□□ -2.46
CPSF4O95639 MIR206-201ENST00000384872 86 ntBASIC-0.3□□□□□ -2.46
CPSF4O95639 BX276092.1-201ENST00000427368 251 ntBASIC-0.3□□□□□ -2.46
CPSF4O95639 RNU7-48P-201ENST00000458875 63 ntBASIC-0.3□□□□□ -2.46
CPSF4O95639 SNORD127-201ENST00000458892 86 ntBASIC-0.3□□□□□ -2.46
CPSF4O95639 RNU7-164P-201ENST00000459221 62 ntBASIC-0.3□□□□□ -2.46
CPSF4O95639 CR383656.4-201ENST00000546909 122 ntBASIC-0.3□□□□□ -2.46
CPSF4O95639 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.3□□□□□ -2.46
CPSF4O95639 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.3□□□□□ -2.46
CPSF4O95639 AC084368.1-201ENST00000620935 65 ntBASIC-0.3□□□□□ -2.46
CPSF4O95639 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.31□□□□□ -2.46
CPSF4O95639 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.31□□□□□ -2.46
CPSF4O95639 RNU6-509P-201ENST00000363519 107 ntBASIC-0.31□□□□□ -2.46
CPSF4O95639 RNA5SP275-201ENST00000363936 118 ntBASIC-0.31□□□□□ -2.46
CPSF4O95639 SNORD27-201ENST00000363981 72 ntBASIC-0.31□□□□□ -2.46
CPSF4O95639 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.31□□□□□ -2.46
CPSF4O95639 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.31□□□□□ -2.46
CPSF4O95639 AC096531.1-201ENST00000419107 107 ntBASIC-0.31□□□□□ -2.46
CPSF4O95639 RNU7-123P-201ENST00000515911 60 ntBASIC-0.31□□□□□ -2.46
CPSF4O95639 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.31□□□□□ -2.46
CPSF4O95639 MIR3920-201ENST00000581751 86 ntBASIC-0.31□□□□□ -2.46
CPSF4O95639 MIR6759-201ENST00000638110 65 ntBASIC-0.31□□□□□ -2.46
CPSF4O95639 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.32□□□□□ -2.46
CPSF4O95639 RNU6-818P-201ENST00000364837 108 ntBASIC-0.32□□□□□ -2.46
CPSF4O95639 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.32□□□□□ -2.46
CPSF4O95639 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.32□□□□□ -2.46
CPSF4O95639 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.32□□□□□ -2.46
CPSF4O95639 MIR876-201ENST00000401147 81 ntBASIC-0.32□□□□□ -2.46
CPSF4O95639 MIR548I2-201ENST00000408348 149 ntBASIC-0.32□□□□□ -2.46
CPSF4O95639 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.32□□□□□ -2.46
CPSF4O95639 MTATP6P21-201ENST00000440681 189 ntBASIC-0.32□□□□□ -2.46
CPSF4O95639 SNORA25.13-201ENST00000516395 103 ntBASIC-0.32□□□□□ -2.46
CPSF4O95639 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.32□□□□□ -2.46
CPSF4O95639 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.33□□□□□ -2.46
CPSF4O95639 MIR516B1-201ENST00000385211 90 ntBASIC-0.33□□□□□ -2.46
CPSF4O95639 MIR519A1-201ENST00000385257 85 ntBASIC-0.33□□□□□ -2.46
CPSF4O95639 RNU7-195P-201ENST00000458793 62 ntBASIC-0.33□□□□□ -2.46
CPSF4O95639 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.33□□□□□ -2.46
CPSF4O95639 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.33□□□□□ -2.46
CPSF4O95639 RNU7-13P-201ENST00000516413 62 ntBASIC-0.33□□□□□ -2.46
CPSF4O95639 MIR3149-201ENST00000584629 83 ntBASIC-0.33□□□□□ -2.46
CPSF4O95639 AC009779.6-201ENST00000603972 165 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms