Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 Y_RNA.49-201ENST00000362714 112 ntBASIC1.19□□□□□ -2.22
VPS4BO75351 SNORA63.5-201ENST00000363548 123 ntBASIC1.19□□□□□ -2.22
VPS4BO75351 RNU6-755P-201ENST00000364400 103 ntBASIC1.19□□□□□ -2.22
VPS4BO75351 RNU4-67P-201ENST00000364569 141 ntBASIC1.19□□□□□ -2.22
VPS4BO75351 RNU6-1107P-201ENST00000364817 104 ntBASIC1.19□□□□□ -2.22
VPS4BO75351 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
VPS4BO75351 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
VPS4BO75351 RNU6-1307P-201ENST00000391012 103 ntBASIC1.19□□□□□ -2.22
VPS4BO75351 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VPS4BO75351 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.19□□□□□ -2.22
VPS4BO75351 RPS26P5-201ENST00000418544 335 ntBASIC1.19□□□□□ -2.22
VPS4BO75351 AC004223.1-201ENST00000479840 271 ntBASIC1.19□□□□□ -2.22
VPS4BO75351 RNA5SP404-201ENST00000517118 132 ntBASIC1.19□□□□□ -2.22
VPS4BO75351 MIR5009-201ENST00000578736 100 ntBASIC1.19□□□□□ -2.22
VPS4BO75351 MIR3660-201ENST00000584845 100 ntBASIC1.19□□□□□ -2.22
VPS4BO75351 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.19□□□□□ -2.22
VPS4BO75351 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
VPS4BO75351 U8.6-201ENST00000364939 135 ntBASIC1.18□□□□□ -2.22
VPS4BO75351 MIR618-201ENST00000385287 98 ntBASIC1.18□□□□□ -2.22
VPS4BO75351 RNU6-1321P-201ENST00000390905 107 ntBASIC1.18□□□□□ -2.22
VPS4BO75351 RNU6-816P-201ENST00000390914 107 ntBASIC1.18□□□□□ -2.22
VPS4BO75351 RNU6-1268P-201ENST00000391214 107 ntBASIC1.18□□□□□ -2.22
VPS4BO75351 RNU6-1239P-201ENST00000391310 107 ntBASIC1.18□□□□□ -2.22
VPS4BO75351 SNORD83.1-201ENST00000411362 77 ntBASIC1.18□□□□□ -2.22
VPS4BO75351 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.18□□□□□ -2.22
VPS4BO75351 RNU7-185P-201ENST00000459215 60 ntBASIC1.18□□□□□ -2.22
VPS4BO75351 RNU6-1018P-201ENST00000516577 106 ntBASIC1.18□□□□□ -2.22
VPS4BO75351 RNU6-521P-201ENST00000516663 105 ntBASIC1.18□□□□□ -2.22
VPS4BO75351 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
VPS4BO75351 Y_RNA.205-201ENST00000364128 113 ntBASIC1.17□□□□□ -2.22
VPS4BO75351 RNU1-36P-201ENST00000365130 165 ntBASIC1.17□□□□□ -2.22
VPS4BO75351 Y_RNA.507-201ENST00000384500 99 ntBASIC1.17□□□□□ -2.22
VPS4BO75351 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
VPS4BO75351 Y_RNA.588-201ENST00000391254 102 ntBASIC1.17□□□□□ -2.22
VPS4BO75351 MIR548J-201ENST00000408833 112 ntBASIC1.17□□□□□ -2.22
VPS4BO75351 AL035461.1-201ENST00000421490 332 ntBASIC1.17□□□□□ -2.22
VPS4BO75351 RNU7-40P-201ENST00000516397 64 ntBASIC1.17□□□□□ -2.22
VPS4BO75351 AC020891.4-201ENST00000605745 93 ntBASIC1.17□□□□□ -2.22
VPS4BO75351 RNY1P2-201ENST00000364820 117 ntBASIC1.16□□□□□ -2.22
VPS4BO75351 RNU6-1014P-201ENST00000383940 103 ntBASIC1.16□□□□□ -2.22
VPS4BO75351 MIR200A-201ENST00000384875 90 ntBASIC1.16□□□□□ -2.22
VPS4BO75351 RNU6-679P-201ENST00000391003 106 ntBASIC1.16□□□□□ -2.22
VPS4BO75351 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.16□□□□□ -2.22
VPS4BO75351 RNU6-1313P-201ENST00000362622 102 ntBASIC1.15□□□□□ -2.23
VPS4BO75351 Y_RNA.328-201ENST00000365208 113 ntBASIC1.15□□□□□ -2.23
VPS4BO75351 RNU6-409P-201ENST00000384114 104 ntBASIC1.15□□□□□ -2.23
VPS4BO75351 MIR1827-201ENST00000408549 66 ntBASIC1.15□□□□□ -2.23
VPS4BO75351 RNU7-48P-201ENST00000458875 63 ntBASIC1.15□□□□□ -2.23
VPS4BO75351 AC087343.1-201ENST00000477341 475 ntBASIC1.15□□□□□ -2.23
VPS4BO75351 AC105081.1-201ENST00000617727 106 ntBASIC1.15□□□□□ -2.23
VPS4BO75351 AC023934.1-201ENST00000574529 2389 ntBASIC1.14□□□□□ -2.23
VPS4BO75351 Y_RNA.98-201ENST00000363109 102 ntBASIC1.14□□□□□ -2.23
VPS4BO75351 Y_RNA.448-201ENST00000384185 108 ntBASIC1.14□□□□□ -2.23
VPS4BO75351 RNU6-106P-201ENST00000384405 107 ntBASIC1.14□□□□□ -2.23
VPS4BO75351 MIR125B2-201ENST00000385128 89 ntBASIC1.14□□□□□ -2.23
VPS4BO75351 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
VPS4BO75351 RNU6-733P-201ENST00000410759 104 ntBASIC1.14□□□□□ -2.23
VPS4BO75351 RPS29P28-201ENST00000446439 141 ntBASIC1.14□□□□□ -2.23
VPS4BO75351 RPL39P25-201ENST00000449384 154 ntBASIC1.14□□□□□ -2.23
VPS4BO75351 AC138749.4-201ENST00000563970 127 ntBASIC1.14□□□□□ -2.23
VPS4BO75351 MIR4771-2-201ENST00000577758 74 ntBASIC1.14□□□□□ -2.23
VPS4BO75351 MIR4491-201ENST00000581087 68 ntBASIC1.14□□□□□ -2.23
VPS4BO75351 MIR4771-1-201ENST00000582617 74 ntBASIC1.14□□□□□ -2.23
VPS4BO75351 MIR4676-201ENST00000583078 72 ntBASIC1.14□□□□□ -2.23
VPS4BO75351 MIR4295-201ENST00000585286 85 ntBASIC1.14□□□□□ -2.23
VPS4BO75351 Y_RNA.360-201ENST00000365512 102 ntBASIC1.13□□□□□ -2.23
VPS4BO75351 Y_RNA.377-201ENST00000365644 108 ntBASIC1.13□□□□□ -2.23
VPS4BO75351 MIR605-201ENST00000385078 83 ntBASIC1.13□□□□□ -2.23
VPS4BO75351 MIR1257-201ENST00000408490 117 ntBASIC1.13□□□□□ -2.23
VPS4BO75351 SNORD93-201ENST00000408813 74 ntBASIC1.13□□□□□ -2.23
VPS4BO75351 FABP5P4-201ENST00000437203 171 ntBASIC1.13□□□□□ -2.23
VPS4BO75351 UBL5P1-201ENST00000507979 193 ntBASIC1.13□□□□□ -2.23
VPS4BO75351 RNU6-1110P-201ENST00000516462 101 ntBASIC1.13□□□□□ -2.23
VPS4BO75351 RNU6-1006P-201ENST00000516998 103 ntBASIC1.13□□□□□ -2.23
VPS4BO75351 AC133485.1-201ENST00000567176 124 ntBASIC1.13□□□□□ -2.23
VPS4BO75351 MIR4694-201ENST00000578534 80 ntBASIC1.13□□□□□ -2.23
VPS4BO75351 Y_RNA.78-201ENST00000362970 110 ntBASIC1.12□□□□□ -2.23
VPS4BO75351 Y_RNA.155-201ENST00000363632 101 ntBASIC1.12□□□□□ -2.23
VPS4BO75351 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.12□□□□□ -2.23
VPS4BO75351 RNU6-994P-201ENST00000410507 111 ntBASIC1.12□□□□□ -2.23
VPS4BO75351 SNORA7.5-201ENST00000410672 110 ntBASIC1.12□□□□□ -2.23
VPS4BO75351 SNORD124-201ENST00000459577 104 ntBASIC1.12□□□□□ -2.23
VPS4BO75351 MIR4804-201ENST00000581683 73 ntBASIC1.12□□□□□ -2.23
VPS4BO75351 SNORD92-201ENST00000585078 85 ntBASIC1.12□□□□□ -2.23
VPS4BO75351 MIR376B-201ENST00000614515 100 ntBASIC1.12□□□□□ -2.23
VPS4BO75351 MIR8066-201ENST00000617280 78 ntBASIC1.12□□□□□ -2.23
VPS4BO75351 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS4BO75351 MIR1-1-201ENST00000362147 71 ntBASIC1.11□□□□□ -2.23
VPS4BO75351 Y_RNA.163-201ENST00000363702 113 ntBASIC1.11□□□□□ -2.23
VPS4BO75351 SNORA22-201ENST00000383907 134 ntBASIC1.11□□□□□ -2.23
VPS4BO75351 RNU6-44P-201ENST00000384045 107 ntBASIC1.11□□□□□ -2.23
VPS4BO75351 RNU6-1201P-201ENST00000384227 107 ntBASIC1.11□□□□□ -2.23
VPS4BO75351 MIR34C-201ENST00000384831 77 ntBASIC1.11□□□□□ -2.23
VPS4BO75351 MIR577-201ENST00000385196 96 ntBASIC1.11□□□□□ -2.23
VPS4BO75351 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS4BO75351 RNU7-56P-201ENST00000458744 62 ntBASIC1.11□□□□□ -2.23
VPS4BO75351 U7.7-201ENST00000459276 60 ntBASIC1.11□□□□□ -2.23
VPS4BO75351 RNU6-1194P-201ENST00000516208 104 ntBASIC1.11□□□□□ -2.23
VPS4BO75351 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS4BO75351 AP001362.1-201ENST00000625165 124 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms