Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 Y_RNA.536-201ENST00000384621 113 ntBASIC2.75□□□□□ -1.97
RNF40O75150 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.75□□□□□ -1.97
RNF40O75150 RPS27P16-201ENST00000425758 201 ntBASIC2.75□□□□□ -1.97
RNF40O75150 MIR4696-201ENST00000581431 70 ntBASIC2.75□□□□□ -1.97
RNF40O75150 MIR3140-201ENST00000583685 90 ntBASIC2.75□□□□□ -1.97
RNF40O75150 MIR6516-201ENST00000630554 81 ntBASIC2.75□□□□□ -1.97
RNF40O75150 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RNF40O75150 RNA5SP432-201ENST00000362480 116 ntBASIC2.74□□□□□ -1.97
RNF40O75150 Y_RNA.239-201ENST00000364444 113 ntBASIC2.74□□□□□ -1.97
RNF40O75150 RN7SL274P-201ENST00000492268 272 ntBASIC2.74□□□□□ -1.97
RNF40O75150 MIR3675-201ENST00000583661 73 ntBASIC2.74□□□□□ -1.97
RNF40O75150 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.74□□□□□ -1.97
RNF40O75150 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RNF40O75150 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.74□□□□□ -1.97
RNF40O75150 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
RNF40O75150 ZNF209P-201ENST00000593450 2304 ntBASIC2.74□□□□□ -1.97
RNF40O75150 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.73□□□□□ -1.97
RNF40O75150 RNU6-664P-201ENST00000362381 107 ntBASIC2.73□□□□□ -1.97
RNF40O75150 SNORD115-22-201ENST00000364456 82 ntBASIC2.73□□□□□ -1.97
RNF40O75150 RNU1-36P-201ENST00000365130 165 ntBASIC2.73□□□□□ -1.97
RNF40O75150 RNU6-580P-201ENST00000365159 107 ntBASIC2.73□□□□□ -1.97
RNF40O75150 SNORA70B-201ENST00000384210 135 ntBASIC2.73□□□□□ -1.97
RNF40O75150 SNORD116-24-201ENST00000384549 92 ntBASIC2.73□□□□□ -1.97
RNF40O75150 AC092628.1-201ENST00000436250 252 ntBASIC2.73□□□□□ -1.97
RNF40O75150 SNORA31.11-201ENST00000516528 139 ntBASIC2.73□□□□□ -1.97
RNF40O75150 SNORA31.25-201ENST00000517242 134 ntBASIC2.73□□□□□ -1.97
RNF40O75150 MIR4446-201ENST00000578505 67 ntBASIC2.73□□□□□ -1.97
RNF40O75150 MIR5089-201ENST00000580047 84 ntBASIC2.73□□□□□ -1.97
RNF40O75150 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
RNF40O75150 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
RNF40O75150 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.72□□□□□ -1.97
RNF40O75150 RNY4P3-201ENST00000365254 95 ntBASIC2.72□□□□□ -1.97
RNF40O75150 RNA5SP259-201ENST00000365541 109 ntBASIC2.72□□□□□ -1.97
RNF40O75150 RNU6-669P-201ENST00000365575 107 ntBASIC2.72□□□□□ -1.97
RNF40O75150 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.72□□□□□ -1.97
RNF40O75150 MIR1185-1-201ENST00000408598 86 ntBASIC2.72□□□□□ -1.97
RNF40O75150 RNU1-41P-201ENST00000516161 162 ntBASIC2.72□□□□□ -1.97
RNF40O75150 RNU1-48P-201ENST00000516400 162 ntBASIC2.72□□□□□ -1.97
RNF40O75150 SNORD53-201ENST00000579969 78 ntBASIC2.72□□□□□ -1.97
RNF40O75150 MIR4635-201ENST00000583759 79 ntBASIC2.72□□□□□ -1.97
RNF40O75150 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.72□□□□□ -1.97
RNF40O75150 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
RNF40O75150 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNF40O75150 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RNF40O75150 RNU6-824P-201ENST00000363724 104 ntBASIC2.71□□□□□ -1.98
RNF40O75150 RNU6-681P-201ENST00000364012 104 ntBASIC2.71□□□□□ -1.98
RNF40O75150 SNORD101-201ENST00000384027 73 ntBASIC2.71□□□□□ -1.98
RNF40O75150 SNORA67.4-201ENST00000384688 142 ntBASIC2.71□□□□□ -1.98
RNF40O75150 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.71□□□□□ -1.98
RNF40O75150 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.7□□□□□ -1.98
RNF40O75150 MIR337-201ENST00000362281 93 ntBASIC2.7□□□□□ -1.98
RNF40O75150 RNA5SP270-201ENST00000411361 118 ntBASIC2.7□□□□□ -1.98
RNF40O75150 MIR18B-201ENST00000454574 71 ntBASIC2.7□□□□□ -1.98
RNF40O75150 Y_RNA.809-201ENST00000516058 95 ntBASIC2.7□□□□□ -1.98
RNF40O75150 RNA5SP24-201ENST00000516478 95 ntBASIC2.7□□□□□ -1.98
RNF40O75150 RNU6-881P-201ENST00000516813 102 ntBASIC2.7□□□□□ -1.98
RNF40O75150 MIR5194-201ENST00000582634 120 ntBASIC2.7□□□□□ -1.98
RNF40O75150 MIR4511-201ENST00000582784 87 ntBASIC2.7□□□□□ -1.98
RNF40O75150 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RNF40O75150 RNU6-654P-201ENST00000364373 107 ntBASIC2.69□□□□□ -1.98
RNF40O75150 JTBP1-201ENST00000441314 247 ntBASIC2.69□□□□□ -1.98
RNF40O75150 AC097510.1-201ENST00000510945 133 ntBASIC2.69□□□□□ -1.98
RNF40O75150 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF40O75150 MIR548H5-201ENST00000580314 60 ntBASIC2.69□□□□□ -1.98
RNF40O75150 MIR5092-201ENST00000583139 88 ntBASIC2.69□□□□□ -1.98
RNF40O75150 MIR8053-201ENST00000613344 75 ntBASIC2.69□□□□□ -1.98
RNF40O75150 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RNF40O75150 SNORD93-201ENST00000408813 74 ntBASIC2.68□□□□□ -1.98
RNF40O75150 SUMO1P4-201ENST00000429430 302 ntBASIC2.68□□□□□ -1.98
RNF40O75150 AC013244.2-201ENST00000603396 103 ntBASIC2.68□□□□□ -1.98
RNF40O75150 RNU7-10P-201ENST00000607194 63 ntBASIC2.68□□□□□ -1.98
RNF40O75150 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.68□□□□□ -1.98
RNF40O75150 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RNF40O75150 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RNF40O75150 Y_RNA.56-201ENST00000362798 112 ntBASIC2.67□□□□□ -1.98
RNF40O75150 RNU6-895P-201ENST00000384125 103 ntBASIC2.67□□□□□ -1.98
RNF40O75150 RNU6-141P-201ENST00000410499 105 ntBASIC2.67□□□□□ -1.98
RNF40O75150 AC097635.1-201ENST00000450678 155 ntBASIC2.67□□□□□ -1.98
RNF40O75150 RNU6-1265P-201ENST00000516342 103 ntBASIC2.67□□□□□ -1.98
RNF40O75150 GHRLOS.1-201ENST00000610995 70 ntBASIC2.67□□□□□ -1.98
RNF40O75150 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.67□□□□□ -1.98
RNF40O75150 AC103706.3-201ENST00000636297 85 ntBASIC2.67□□□□□ -1.98
RNF40O75150 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RNF40O75150 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
RNF40O75150 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.66□□□□□ -1.98
RNF40O75150 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
RNF40O75150 U8.2-201ENST00000363156 134 ntBASIC2.66□□□□□ -1.98
RNF40O75150 RNA5SP95-201ENST00000410319 137 ntBASIC2.66□□□□□ -1.98
RNF40O75150 RNA5SP282-201ENST00000516355 108 ntBASIC2.66□□□□□ -1.98
RNF40O75150 AC015688.6-201ENST00000577737 104 ntBASIC2.66□□□□□ -1.98
RNF40O75150 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
RNF40O75150 AP006437.1-201ENST00000641440 3685 ntBASIC2.65□□□□□ -1.99
RNF40O75150 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
RNF40O75150 SNORA3A-201ENST00000364113 130 ntBASIC2.65□□□□□ -1.99
RNF40O75150 SNORA3.2-201ENST00000408221 125 ntBASIC2.65□□□□□ -1.99
RNF40O75150 RNU6-935P-201ENST00000410371 100 ntBASIC2.65□□□□□ -1.99
RNF40O75150 AC110620.1-201ENST00000416042 228 ntBASIC2.65□□□□□ -1.99
RNF40O75150 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.65□□□□□ -1.99
RNF40O75150 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
RNF40O75150 MIR101-2-201ENST00000362195 79 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 284.1 ms