Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.43□□□□□ -2.48
SMPD2O60906 AL442663.2-201ENST00000554385 511 ntBASIC-0.43□□□□□ -2.48
SMPD2O60906 AL160413.1-201ENST00000622780 310 ntBASIC-0.43□□□□□ -2.48
SMPD2O60906 SNORA25.7-201ENST00000364375 127 ntBASIC-0.44□□□□□ -2.48
SMPD2O60906 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.44□□□□□ -2.48
SMPD2O60906 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.44□□□□□ -2.48
SMPD2O60906 RNA5SP300-201ENST00000391197 107 ntBASIC-0.44□□□□□ -2.48
SMPD2O60906 SNORD110-201ENST00000408189 75 ntBASIC-0.44□□□□□ -2.48
SMPD2O60906 RNU7-74P-201ENST00000459104 62 ntBASIC-0.44□□□□□ -2.48
SMPD2O60906 SNORD67.1-201ENST00000516618 108 ntBASIC-0.44□□□□□ -2.48
SMPD2O60906 AC084368.1-201ENST00000620935 65 ntBASIC-0.44□□□□□ -2.48
SMPD2O60906 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.44□□□□□ -2.48
SMPD2O60906 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.45□□□□□ -2.48
SMPD2O60906 RNY3P14-201ENST00000384309 102 ntBASIC-0.45□□□□□ -2.48
SMPD2O60906 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.45□□□□□ -2.48
SMPD2O60906 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.45□□□□□ -2.48
SMPD2O60906 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.45□□□□□ -2.48
SMPD2O60906 RNU6-578P-201ENST00000390980 103 ntBASIC-0.45□□□□□ -2.48
SMPD2O60906 AC006210.1-201ENST00000424882 111 ntBASIC-0.45□□□□□ -2.48
SMPD2O60906 AC097635.1-201ENST00000450678 155 ntBASIC-0.45□□□□□ -2.48
SMPD2O60906 MIR4680-201ENST00000580906 66 ntBASIC-0.45□□□□□ -2.48
SMPD2O60906 MIR4801-201ENST00000582704 82 ntBASIC-0.45□□□□□ -2.48
SMPD2O60906 AL356055.1-201ENST00000602528 446 ntBASIC-0.45□□□□□ -2.48
SMPD2O60906 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.45□□□□□ -2.48
SMPD2O60906 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.46□□□□□ -2.48
SMPD2O60906 SNORA32-201ENST00000384072 121 ntBASIC-0.46□□□□□ -2.48
SMPD2O60906 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.46□□□□□ -2.48
SMPD2O60906 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.46□□□□□ -2.48
SMPD2O60906 MIR548I2-201ENST00000408348 149 ntBASIC-0.46□□□□□ -2.48
SMPD2O60906 SNORA25.13-201ENST00000516395 103 ntBASIC-0.46□□□□□ -2.48
SMPD2O60906 MIR4263-201ENST00000584745 83 ntBASIC-0.46□□□□□ -2.48
SMPD2O60906 AL359881.1-201ENST00000602916 267 ntBASIC-0.46□□□□□ -2.48
SMPD2O60906 AC011603.4-201ENST00000611325 277 ntBASIC-0.46□□□□□ -2.48
SMPD2O60906 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.46□□□□□ -2.48
SMPD2O60906 RN7SL660P-201ENST00000614852 299 ntBASIC-0.46□□□□□ -2.48
SMPD2O60906 AC105081.1-201ENST00000617727 106 ntBASIC-0.46□□□□□ -2.48
SMPD2O60906 U6.104-201ENST00000637979 90 ntBASIC-0.46□□□□□ -2.48
SMPD2O60906 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.47□□□□□ -2.48
SMPD2O60906 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.47□□□□□ -2.48
SMPD2O60906 SNORD114-11-201ENST00000363738 75 ntBASIC-0.47□□□□□ -2.48
SMPD2O60906 SNORD14C-201ENST00000365382 88 ntBASIC-0.47□□□□□ -2.48
SMPD2O60906 MIR599-201ENST00000385069 95 ntBASIC-0.47□□□□□ -2.48
SMPD2O60906 MIR519A1-201ENST00000385257 85 ntBASIC-0.47□□□□□ -2.48
SMPD2O60906 MIR548P-201ENST00000408336 84 ntBASIC-0.47□□□□□ -2.48
SMPD2O60906 SNORD126-201ENST00000459475 77 ntBASIC-0.47□□□□□ -2.48
SMPD2O60906 MIR548AE2-201ENST00000583456 67 ntBASIC-0.47□□□□□ -2.48
SMPD2O60906 MTND4P29-201ENST00000503122 1372 ntBASIC-0.47□□□□□ -2.49
SMPD2O60906 MIR655-201ENST00000362159 97 ntBASIC-0.48□□□□□ -2.49
SMPD2O60906 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.48□□□□□ -2.49
SMPD2O60906 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.48□□□□□ -2.49
SMPD2O60906 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.48□□□□□ -2.49
SMPD2O60906 RNU6-985P-201ENST00000410182 104 ntBASIC-0.48□□□□□ -2.49
SMPD2O60906 snoU13.11-201ENST00000459219 104 ntBASIC-0.48□□□□□ -2.49
SMPD2O60906 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.48□□□□□ -2.49
SMPD2O60906 NAMPTP3-201ENST00000569273 224 ntBASIC-0.48□□□□□ -2.49
SMPD2O60906 MIR4436A-201ENST00000585278 85 ntBASIC-0.48□□□□□ -2.49
SMPD2O60906 AC006504.6-201ENST00000590142 199 ntBASIC-0.48□□□□□ -2.49
SMPD2O60906 AL162726.3-218ENST00000636401 95 ntBASIC-0.48□□□□□ -2.49
SMPD2O60906 MIR4788-201ENST00000639104 80 ntBASIC-0.48□□□□□ -2.49
SMPD2O60906 RNU6-643P-201ENST00000384018 107 ntBASIC-0.49□□□□□ -2.49
SMPD2O60906 RNU6-480P-201ENST00000384332 107 ntBASIC-0.49□□□□□ -2.49
SMPD2O60906 SNORA32.3-201ENST00000384772 121 ntBASIC-0.49□□□□□ -2.49
SMPD2O60906 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.49□□□□□ -2.49
SMPD2O60906 AC244250.2-201ENST00000418731 148 ntBASIC-0.49□□□□□ -2.49
SMPD2O60906 TRAJ51-201ENST00000504127 63 ntBASIC-0.49□□□□□ -2.49
SMPD2O60906 uc_338.36-201ENST00000622331 158 ntBASIC-0.49□□□□□ -2.49
SMPD2O60906 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.49□□□□□ -2.49
SMPD2O60906 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.5□□□□□ -2.49
SMPD2O60906 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.5□□□□□ -2.49
SMPD2O60906 RNU6-865P-201ENST00000364772 107 ntBASIC-0.5□□□□□ -2.49
SMPD2O60906 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.5□□□□□ -2.49
SMPD2O60906 RNU6-713P-201ENST00000384761 107 ntBASIC-0.5□□□□□ -2.49
SMPD2O60906 BX276092.1-201ENST00000427368 251 ntBASIC-0.5□□□□□ -2.49
SMPD2O60906 MIR6507-201ENST00000613630 70 ntBASIC-0.5□□□□□ -2.49
SMPD2O60906 MIR409-201ENST00000362237 79 ntBASIC-0.51□□□□□ -2.49
SMPD2O60906 RNU6-690P-201ENST00000365242 106 ntBASIC-0.51□□□□□ -2.49
SMPD2O60906 MIR516B1-201ENST00000385211 90 ntBASIC-0.51□□□□□ -2.49
SMPD2O60906 RNA5SP484-201ENST00000458857 111 ntBASIC-0.51□□□□□ -2.49
SMPD2O60906 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.51□□□□□ -2.49
SMPD2O60906 RNA5SP236-201ENST00000516169 116 ntBASIC-0.51□□□□□ -2.49
SMPD2O60906 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.51□□□□□ -2.49
SMPD2O60906 MIR4500-201ENST00000579472 76 ntBASIC-0.51□□□□□ -2.49
SMPD2O60906 MIR3920-201ENST00000581751 86 ntBASIC-0.51□□□□□ -2.49
SMPD2O60906 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.52□□□□□ -2.49
SMPD2O60906 RNA5SP205-201ENST00000364653 136 ntBASIC-0.52□□□□□ -2.49
SMPD2O60906 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.52□□□□□ -2.49
SMPD2O60906 RNA5SP331-201ENST00000364986 107 ntBASIC-0.52□□□□□ -2.49
SMPD2O60906 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.52□□□□□ -2.49
SMPD2O60906 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.52□□□□□ -2.49
SMPD2O60906 RNU4-69P-201ENST00000410677 143 ntBASIC-0.52□□□□□ -2.49
SMPD2O60906 RNU6-284P-201ENST00000411105 106 ntBASIC-0.52□□□□□ -2.49
SMPD2O60906 RNU7-48P-201ENST00000458875 63 ntBASIC-0.52□□□□□ -2.49
SMPD2O60906 AC074198.2-201ENST00000508153 258 ntBASIC-0.52□□□□□ -2.49
SMPD2O60906 RNU7-13P-201ENST00000516413 62 ntBASIC-0.52□□□□□ -2.49
SMPD2O60906 MIR3171-201ENST00000584270 74 ntBASIC-0.52□□□□□ -2.49
SMPD2O60906 FTX_2.1-201ENST00000618816 94 ntBASIC-0.52□□□□□ -2.49
SMPD2O60906 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.53□□□□□ -2.49
SMPD2O60906 RNU6-811P-201ENST00000384069 107 ntBASIC-0.53□□□□□ -2.49
SMPD2O60906 AC114755.3-201ENST00000481111 251 ntBASIC-0.53□□□□□ -2.49
SMPD2O60906 RNU2-35P-201ENST00000516446 142 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 256.7 ms