Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.79□□□□□ -2.54
SHOX2O60902 MIR548H5-201ENST00000580314 60 ntBASIC-0.79□□□□□ -2.54
SHOX2O60902 RNU7-10P-201ENST00000607194 63 ntBASIC-0.79□□□□□ -2.54
SHOX2O60902 AL445584.3-201ENST00000617173 78 ntBASIC-0.79□□□□□ -2.54
SHOX2O60902 MIR382-201ENST00000637119 76 ntBASIC-0.79□□□□□ -2.54
SHOX2O60902 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.8□□□□□ -2.54
SHOX2O60902 RNU6-449P-201ENST00000383914 107 ntBASIC-0.8□□□□□ -2.54
SHOX2O60902 RNU6-455P-201ENST00000384681 107 ntBASIC-0.8□□□□□ -2.54
SHOX2O60902 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.8□□□□□ -2.54
SHOX2O60902 RNU7-35P-201ENST00000517174 62 ntBASIC-0.8□□□□□ -2.54
SHOX2O60902 MIR5591-201ENST00000578248 65 ntBASIC-0.8□□□□□ -2.54
SHOX2O60902 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.81□□□□□ -2.54
SHOX2O60902 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.81□□□□□ -2.54
SHOX2O60902 SNORD74.6-201ENST00000364796 70 ntBASIC-0.81□□□□□ -2.54
SHOX2O60902 SNORD81.2-201ENST00000365153 76 ntBASIC-0.81□□□□□ -2.54
SHOX2O60902 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.81□□□□□ -2.54
SHOX2O60902 MIR518B-201ENST00000385127 83 ntBASIC-0.81□□□□□ -2.54
SHOX2O60902 MIR204-201ENST00000385200 110 ntBASIC-0.81□□□□□ -2.54
SHOX2O60902 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.81□□□□□ -2.54
SHOX2O60902 AL731563.1-201ENST00000442202 214 ntBASIC-0.81□□□□□ -2.54
SHOX2O60902 HSPE1P25-201ENST00000455484 251 ntBASIC-0.81□□□□□ -2.54
SHOX2O60902 MIR3920-201ENST00000581751 86 ntBASIC-0.81□□□□□ -2.54
SHOX2O60902 RNU6-86P-201ENST00000606534 107 ntBASIC-0.81□□□□□ -2.54
SHOX2O60902 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.81□□□□□ -2.54
SHOX2O60902 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.81□□□□□ -2.54
SHOX2O60902 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.81□□□□□ -2.54
SHOX2O60902 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.82□□□□□ -2.54
SHOX2O60902 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.82□□□□□ -2.54
SHOX2O60902 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.82□□□□□ -2.54
SHOX2O60902 RNU6-130P-201ENST00000411112 103 ntBASIC-0.82□□□□□ -2.54
SHOX2O60902 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.82□□□□□ -2.54
SHOX2O60902 RNU6-507P-201ENST00000516045 100 ntBASIC-0.82□□□□□ -2.54
SHOX2O60902 RNU6-118P-201ENST00000516552 102 ntBASIC-0.82□□□□□ -2.54
SHOX2O60902 MIR4520-1-201ENST00000582609 70 ntBASIC-0.82□□□□□ -2.54
SHOX2O60902 AC098479.1-201ENST00000609225 154 ntBASIC-0.82□□□□□ -2.54
SHOX2O60902 MIR376A1-201ENST00000616574 68 ntBASIC-0.82□□□□□ -2.54
SHOX2O60902 MIR599-201ENST00000385069 95 ntBASIC-0.83□□□□□ -2.54
SHOX2O60902 MIR124-2-201ENST00000385081 109 ntBASIC-0.83□□□□□ -2.54
SHOX2O60902 SNORD64-201ENST00000386683 67 ntBASIC-0.83□□□□□ -2.54
SHOX2O60902 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
SHOX2O60902 TRAJ51-201ENST00000504127 63 ntBASIC-0.83□□□□□ -2.54
SHOX2O60902 MIR3179-1-201ENST00000578940 84 ntBASIC-0.83□□□□□ -2.54
SHOX2O60902 MIR3179-2-201ENST00000579107 84 ntBASIC-0.83□□□□□ -2.54
SHOX2O60902 MIR3179-3-201ENST00000579566 84 ntBASIC-0.83□□□□□ -2.54
SHOX2O60902 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.83□□□□□ -2.54
SHOX2O60902 AC037487.3-201ENST00000606668 112 ntBASIC-0.83□□□□□ -2.54
SHOX2O60902 PART1_1.1-201ENST00000611761 217 ntBASIC-0.83□□□□□ -2.54
SHOX2O60902 MIR3179-4-201ENST00000617599 84 ntBASIC-0.83□□□□□ -2.54
SHOX2O60902 MTND5P18-201ENST00000445624 1801 ntBASIC-0.83□□□□□ -2.54
SHOX2O60902 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 RNU4-10P-201ENST00000364383 140 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 RNU1-141P-201ENST00000364623 158 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 MIR181B2-201ENST00000385004 89 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 MIR517B-201ENST00000385102 67 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 SNORD38.3-201ENST00000516599 73 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 MIR4473-201ENST00000583731 91 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 AC145423.2-201ENST00000610631 239 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 AC084782.3-201ENST00000612282 578 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 AC092794.1-201ENST00000612734 582 ntBASIC-0.84□□□□□ -2.54
SHOX2O60902 SNORA25.1-201ENST00000362326 128 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 MIR539-201ENST00000365690 78 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 RNU6-102P-201ENST00000384485 104 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
SHOX2O60902 AC097635.1-201ENST00000450678 155 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 RNU6-479P-201ENST00000516348 105 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 RNU7-137P-201ENST00000516788 62 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 MIR3129-201ENST00000581095 76 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 SNORD58B-201ENST00000607313 66 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 MTND4LP32-201ENST00000636111 270 ntBASIC-0.85□□□□□ -2.55
SHOX2O60902 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.86□□□□□ -2.55
SHOX2O60902 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.86□□□□□ -2.55
SHOX2O60902 SNORD116-29-201ENST00000384516 83 ntBASIC-0.86□□□□□ -2.55
SHOX2O60902 RNU6-429P-201ENST00000384582 108 ntBASIC-0.86□□□□□ -2.55
SHOX2O60902 SNORA53-201ENST00000391141 249 ntBASIC-0.86□□□□□ -2.55
SHOX2O60902 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.86□□□□□ -2.55
SHOX2O60902 RNU7-134P-201ENST00000458997 64 ntBASIC-0.86□□□□□ -2.55
SHOX2O60902 RNU7-74P-201ENST00000459104 62 ntBASIC-0.86□□□□□ -2.55
SHOX2O60902 MIR4770-201ENST00000579149 58 ntBASIC-0.86□□□□□ -2.55
SHOX2O60902 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.87□□□□□ -2.55
SHOX2O60902 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.87□□□□□ -2.55
SHOX2O60902 MIR29B1-201ENST00000385015 81 ntBASIC-0.87□□□□□ -2.55
SHOX2O60902 MIR889-201ENST00000401280 79 ntBASIC-0.87□□□□□ -2.55
SHOX2O60902 RNU7-152P-201ENST00000458982 64 ntBASIC-0.87□□□□□ -2.55
SHOX2O60902 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms