Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 Y_RNA.555-201ENST00000384673 110 ntBASIC0.61□□□□□ -2.31
TSPAN3O60637 RNU4-69P-201ENST00000410677 143 ntBASIC0.61□□□□□ -2.31
TSPAN3O60637 AC098934.3-201ENST00000430450 190 ntBASIC0.61□□□□□ -2.31
TSPAN3O60637 AC092628.1-201ENST00000436250 252 ntBASIC0.61□□□□□ -2.31
TSPAN3O60637 Y_RNA.697-201ENST00000516776 113 ntBASIC0.61□□□□□ -2.31
TSPAN3O60637 RNU7-137P-201ENST00000516788 62 ntBASIC0.61□□□□□ -2.31
TSPAN3O60637 AP003327.1-201ENST00000529684 127 ntBASIC0.61□□□□□ -2.31
TSPAN3O60637 RNA5SP499-201ENST00000363982 119 ntBASIC0.6□□□□□ -2.31
TSPAN3O60637 RNA5SP272-201ENST00000516095 111 ntBASIC0.6□□□□□ -2.31
TSPAN3O60637 RNU6-531P-201ENST00000516694 104 ntBASIC0.6□□□□□ -2.31
TSPAN3O60637 RNU6-765P-201ENST00000516916 99 ntBASIC0.6□□□□□ -2.31
TSPAN3O60637 AC018659.1-201ENST00000551083 169 ntBASIC0.6□□□□□ -2.31
TSPAN3O60637 MTND5P34-201ENST00000568888 325 ntBASIC0.6□□□□□ -2.31
TSPAN3O60637 MIR3678-201ENST00000578455 94 ntBASIC0.6□□□□□ -2.31
TSPAN3O60637 MIR3121-201ENST00000579680 77 ntBASIC0.6□□□□□ -2.31
TSPAN3O60637 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.6□□□□□ -2.31
TSPAN3O60637 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
TSPAN3O60637 Y_RNA.115-201ENST00000363272 98 ntBASIC0.59□□□□□ -2.31
TSPAN3O60637 Y_RNA.294-201ENST00000364916 102 ntBASIC0.59□□□□□ -2.31
TSPAN3O60637 Y_RNA.299-201ENST00000364973 94 ntBASIC0.59□□□□□ -2.31
TSPAN3O60637 MIR569-201ENST00000385228 96 ntBASIC0.59□□□□□ -2.31
TSPAN3O60637 RNU6-469P-201ENST00000516253 101 ntBASIC0.59□□□□□ -2.31
TSPAN3O60637 RNU6-229P-201ENST00000516614 102 ntBASIC0.59□□□□□ -2.31
TSPAN3O60637 RNA5SP330-201ENST00000517096 96 ntBASIC0.59□□□□□ -2.31
TSPAN3O60637 AC243829.3-201ENST00000622177 108 ntBASIC0.59□□□□□ -2.31
TSPAN3O60637 RNU6-1104P-201ENST00000384723 104 ntBASIC0.58□□□□□ -2.32
TSPAN3O60637 MIR644A-201ENST00000385262 94 ntBASIC0.58□□□□□ -2.32
TSPAN3O60637 SNORD77B-201ENST00000391112 67 ntBASIC0.58□□□□□ -2.32
TSPAN3O60637 MIR1270-201ENST00000459320 83 ntBASIC0.58□□□□□ -2.32
TSPAN3O60637 RNU6-1194P-201ENST00000516208 104 ntBASIC0.58□□□□□ -2.32
TSPAN3O60637 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
TSPAN3O60637 AC092634.7-201ENST00000621022 103 ntBASIC0.58□□□□□ -2.32
TSPAN3O60637 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
TSPAN3O60637 Y_RNA.32-201ENST00000362589 110 ntBASIC0.57□□□□□ -2.32
TSPAN3O60637 RNU4-58P-201ENST00000363192 141 ntBASIC0.57□□□□□ -2.32
TSPAN3O60637 Y_RNA.114-201ENST00000363265 113 ntBASIC0.57□□□□□ -2.32
TSPAN3O60637 SNORD114-10-201ENST00000363409 72 ntBASIC0.57□□□□□ -2.32
TSPAN3O60637 Y_RNA.488-201ENST00000384403 102 ntBASIC0.57□□□□□ -2.32
TSPAN3O60637 RNU6-535P-201ENST00000384722 107 ntBASIC0.57□□□□□ -2.32
TSPAN3O60637 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
TSPAN3O60637 RNA5SP94-201ENST00000516917 108 ntBASIC0.57□□□□□ -2.32
TSPAN3O60637 MIR3668-201ENST00000582138 75 ntBASIC0.57□□□□□ -2.32
TSPAN3O60637 MIR8087-201ENST00000612745 78 ntBASIC0.57□□□□□ -2.32
TSPAN3O60637 MIR5087-201ENST00000635826 76 ntBASIC0.57□□□□□ -2.32
TSPAN3O60637 MIR330-201ENST00000362196 94 ntBASIC0.56□□□□□ -2.32
TSPAN3O60637 Y_RNA.170-201ENST00000363746 110 ntBASIC0.56□□□□□ -2.32
TSPAN3O60637 Y_RNA.536-201ENST00000384621 113 ntBASIC0.56□□□□□ -2.32
TSPAN3O60637 RNU6-291P-201ENST00000384720 107 ntBASIC0.56□□□□□ -2.32
TSPAN3O60637 Y_RNA.567-201ENST00000384736 106 ntBASIC0.56□□□□□ -2.32
TSPAN3O60637 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
TSPAN3O60637 RNU6-426P-201ENST00000516464 97 ntBASIC0.56□□□□□ -2.32
TSPAN3O60637 SNORA31.14-201ENST00000516728 116 ntBASIC0.56□□□□□ -2.32
TSPAN3O60637 AC138749.4-201ENST00000563970 127 ntBASIC0.56□□□□□ -2.32
TSPAN3O60637 AP001340.1-201ENST00000624405 217 ntBASIC0.56□□□□□ -2.32
TSPAN3O60637 Y_RNA.85-201ENST00000363014 111 ntBASIC0.55□□□□□ -2.32
TSPAN3O60637 Y_RNA.180-201ENST00000363867 113 ntBASIC0.55□□□□□ -2.32
TSPAN3O60637 Y_RNA.258-201ENST00000364613 105 ntBASIC0.55□□□□□ -2.32
TSPAN3O60637 IGKV1-22-201ENST00000524313 326 ntBASIC0.55□□□□□ -2.32
TSPAN3O60637 MIR101-2-201ENST00000362195 79 ntBASIC0.54□□□□□ -2.32
TSPAN3O60637 Y_RNA.119-201ENST00000363301 96 ntBASIC0.54□□□□□ -2.32
TSPAN3O60637 RNA5SP517-201ENST00000364724 117 ntBASIC0.54□□□□□ -2.32
TSPAN3O60637 AL109933.3-201ENST00000619095 188 ntBASIC0.54□□□□□ -2.32
TSPAN3O60637 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
TSPAN3O60637 uc_338.16-201ENST00000621804 95 ntBASIC0.54□□□□□ -2.32
TSPAN3O60637 Y_RNA.174-201ENST00000363781 105 ntBASIC0.53□□□□□ -2.32
TSPAN3O60637 RNU6-647P-201ENST00000364243 107 ntBASIC0.53□□□□□ -2.32
TSPAN3O60637 Y_RNA.448-201ENST00000384185 108 ntBASIC0.53□□□□□ -2.32
TSPAN3O60637 Y_RNA.464-201ENST00000384282 110 ntBASIC0.53□□□□□ -2.32
TSPAN3O60637 MIR206-201ENST00000384872 86 ntBASIC0.53□□□□□ -2.32
TSPAN3O60637 RNU6-1321P-201ENST00000390905 107 ntBASIC0.53□□□□□ -2.32
TSPAN3O60637 MIR1263-201ENST00000408324 86 ntBASIC0.53□□□□□ -2.32
TSPAN3O60637 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
TSPAN3O60637 RN7SKP19-201ENST00000516016 252 ntBASIC0.53□□□□□ -2.32
TSPAN3O60637 RNU7-200P-201ENST00000516105 62 ntBASIC0.53□□□□□ -2.32
TSPAN3O60637 RN7SKP12-201ENST00000516275 143 ntBASIC0.53□□□□□ -2.32
TSPAN3O60637 RNU7-6P-201ENST00000516845 62 ntBASIC0.53□□□□□ -2.32
TSPAN3O60637 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.53□□□□□ -2.32
TSPAN3O60637 SNORA25.18-201ENST00000607153 114 ntBASIC0.52□□□□□ -2.33
TSPAN3O60637 U7.2-201ENST00000607576 63 ntBASIC0.52□□□□□ -2.33
TSPAN3O60637 RNU6-616P-201ENST00000384353 107 ntBASIC0.51□□□□□ -2.33
TSPAN3O60637 SNORD71-201ENST00000411292 86 ntBASIC0.51□□□□□ -2.33
TSPAN3O60637 SNORA68.3-201ENST00000515906 83 ntBASIC0.51□□□□□ -2.33
TSPAN3O60637 RNU6-255P-201ENST00000516957 105 ntBASIC0.51□□□□□ -2.33
TSPAN3O60637 SNORD18A-201ENST00000363753 72 ntBASIC0.5□□□□□ -2.33
TSPAN3O60637 RNU6-716P-201ENST00000365621 103 ntBASIC0.5□□□□□ -2.33
TSPAN3O60637 RNU6-346P-201ENST00000516288 111 ntBASIC0.5□□□□□ -2.33
TSPAN3O60637 Y_RNA.681-201ENST00000516445 113 ntBASIC0.5□□□□□ -2.33
TSPAN3O60637 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
TSPAN3O60637 SNORA63.5-201ENST00000363548 123 ntBASIC0.49□□□□□ -2.33
TSPAN3O60637 RNU6-1229P-201ENST00000364295 107 ntBASIC0.49□□□□□ -2.33
TSPAN3O60637 RNY1P2-201ENST00000364820 117 ntBASIC0.49□□□□□ -2.33
TSPAN3O60637 SNORA40.8-201ENST00000411034 126 ntBASIC0.49□□□□□ -2.33
TSPAN3O60637 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
TSPAN3O60637 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.49□□□□□ -2.33
TSPAN3O60637 AL158147.1-201ENST00000443970 75 ntBASIC0.49□□□□□ -2.33
TSPAN3O60637 RNU7-48P-201ENST00000458875 63 ntBASIC0.49□□□□□ -2.33
TSPAN3O60637 RNU7-2P-201ENST00000516096 62 ntBASIC0.49□□□□□ -2.33
TSPAN3O60637 RNU6-235P-201ENST00000362644 107 ntBASIC0.48□□□□□ -2.33
TSPAN3O60637 RNA5SP257-201ENST00000363023 116 ntBASIC0.48□□□□□ -2.33
TSPAN3O60637 RNA5SP245-201ENST00000364239 121 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms