Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 Y_RNA.10-201ENST00000362371 110 ntBASIC1.33□□□□□ -2.2
PEX1O43933 Y_RNA.168-201ENST00000363740 102 ntBASIC1.33□□□□□ -2.2
PEX1O43933 SNORA7.1-201ENST00000363750 139 ntBASIC1.33□□□□□ -2.2
PEX1O43933 Y_RNA.342-201ENST00000365352 113 ntBASIC1.33□□□□□ -2.2
PEX1O43933 Y_RNA.467-201ENST00000384297 102 ntBASIC1.33□□□□□ -2.2
PEX1O43933 RNY1P7-201ENST00000384743 110 ntBASIC1.33□□□□□ -2.2
PEX1O43933 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
PEX1O43933 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.33□□□□□ -2.2
PEX1O43933 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.33□□□□□ -2.2
PEX1O43933 RNU6-321P-201ENST00000410912 106 ntBASIC1.33□□□□□ -2.2
PEX1O43933 AC004941.2-201ENST00000427009 228 ntBASIC1.33□□□□□ -2.2
PEX1O43933 RNU7-61P-201ENST00000515897 61 ntBASIC1.33□□□□□ -2.2
PEX1O43933 AC036111.3-201ENST00000526389 112 ntBASIC1.33□□□□□ -2.2
PEX1O43933 AC138749.4-201ENST00000563970 127 ntBASIC1.33□□□□□ -2.2
PEX1O43933 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
PEX1O43933 Y_RNA.95-201ENST00000363079 95 ntBASIC1.32□□□□□ -2.2
PEX1O43933 Y_RNA.98-201ENST00000363109 102 ntBASIC1.32□□□□□ -2.2
PEX1O43933 SNORD26-201ENST00000384147 75 ntBASIC1.32□□□□□ -2.2
PEX1O43933 SNORA2B-201ENST00000384583 137 ntBASIC1.32□□□□□ -2.2
PEX1O43933 RNU6-447P-201ENST00000410293 104 ntBASIC1.32□□□□□ -2.2
PEX1O43933 RNU6-1118P-201ENST00000410382 104 ntBASIC1.32□□□□□ -2.2
PEX1O43933 RNU6-1076P-201ENST00000410397 104 ntBASIC1.32□□□□□ -2.2
PEX1O43933 RNU6-355P-201ENST00000410427 104 ntBASIC1.32□□□□□ -2.2
PEX1O43933 RNU6-791P-201ENST00000410467 104 ntBASIC1.32□□□□□ -2.2
PEX1O43933 RNU6-705P-201ENST00000410601 104 ntBASIC1.32□□□□□ -2.2
PEX1O43933 RNU6-1100P-201ENST00000410691 104 ntBASIC1.32□□□□□ -2.2
PEX1O43933 RNU6-860P-201ENST00000410860 104 ntBASIC1.32□□□□□ -2.2
PEX1O43933 RNU6-1217P-201ENST00000411276 104 ntBASIC1.32□□□□□ -2.2
PEX1O43933 RNU6-785P-201ENST00000411324 104 ntBASIC1.32□□□□□ -2.2
PEX1O43933 AC109327.2-201ENST00000448339 378 ntBASIC1.32□□□□□ -2.2
PEX1O43933 TRMT112P2-201ENST00000512910 132 ntBASIC1.32□□□□□ -2.2
PEX1O43933 MIR4421-201ENST00000578133 69 ntBASIC1.32□□□□□ -2.2
PEX1O43933 U6.90-201ENST00000614007 104 ntBASIC1.32□□□□□ -2.2
PEX1O43933 U6.70-201ENST00000620287 104 ntBASIC1.32□□□□□ -2.2
PEX1O43933 MIR4679-1-201ENST00000637619 75 ntBASIC1.32□□□□□ -2.2
PEX1O43933 SNORD38.1-201ENST00000363863 68 ntBASIC1.31□□□□□ -2.2
PEX1O43933 RNU6-1163P-201ENST00000364516 107 ntBASIC1.31□□□□□ -2.2
PEX1O43933 SNORD45B-201ENST00000364617 72 ntBASIC1.31□□□□□ -2.2
PEX1O43933 Y_RNA.369-201ENST00000365568 117 ntBASIC1.31□□□□□ -2.2
PEX1O43933 RNU6-910P-201ENST00000390844 107 ntBASIC1.31□□□□□ -2.2
PEX1O43933 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.31□□□□□ -2.2
PEX1O43933 AC015818.7-201ENST00000428754 109 ntBASIC1.31□□□□□ -2.2
PEX1O43933 AC087499.7-201ENST00000441958 109 ntBASIC1.31□□□□□ -2.2
PEX1O43933 RPS29P28-201ENST00000446439 141 ntBASIC1.31□□□□□ -2.2
PEX1O43933 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.31□□□□□ -2.2
PEX1O43933 AC133485.1-201ENST00000567176 124 ntBASIC1.31□□□□□ -2.2
PEX1O43933 MIR4781-201ENST00000585250 76 ntBASIC1.31□□□□□ -2.2
PEX1O43933 MALAT1.1-201ENST00000618249 95 ntBASIC1.31□□□□□ -2.2
PEX1O43933 MIR337-201ENST00000362281 93 ntBASIC1.3□□□□□ -2.2
PEX1O43933 MT-TF-201ENST00000387314 71 ntBASIC1.3□□□□□ -2.2
PEX1O43933 SNORD83.1-201ENST00000411362 77 ntBASIC1.3□□□□□ -2.2
PEX1O43933 RNU7-21P-201ENST00000459430 62 ntBASIC1.3□□□□□ -2.2
PEX1O43933 AC023827.1-201ENST00000569247 97 ntBASIC1.3□□□□□ -2.2
PEX1O43933 AP001362.1-201ENST00000625165 124 ntBASIC1.3□□□□□ -2.2
PEX1O43933 U6.109-201ENST00000636749 87 ntBASIC1.3□□□□□ -2.2
PEX1O43933 SNORD113.3-201ENST00000364630 78 ntBASIC1.29□□□□□ -2.2
PEX1O43933 RNY1P2-201ENST00000364820 117 ntBASIC1.29□□□□□ -2.2
PEX1O43933 Y_RNA.290-201ENST00000364879 114 ntBASIC1.29□□□□□ -2.2
PEX1O43933 Y_RNA.588-201ENST00000391254 102 ntBASIC1.29□□□□□ -2.2
PEX1O43933 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.29□□□□□ -2.2
PEX1O43933 RNU6-162P-201ENST00000516228 103 ntBASIC1.29□□□□□ -2.2
PEX1O43933 AC090897.1-201ENST00000580909 226 ntBASIC1.29□□□□□ -2.2
PEX1O43933 AC096720.1-201ENST00000604441 183 ntBASIC1.29□□□□□ -2.2
PEX1O43933 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.29□□□□□ -2.2
PEX1O43933 AL157834.3-201ENST00000615543 103 ntBASIC1.29□□□□□ -2.2
PEX1O43933 AC012676.2-201ENST00000619258 186 ntBASIC1.29□□□□□ -2.2
PEX1O43933 RNY1P10-201ENST00000363268 113 ntBASIC1.28□□□□□ -2.2
PEX1O43933 RNA5SP133-201ENST00000363368 119 ntBASIC1.28□□□□□ -2.2
PEX1O43933 Y_RNA.327-201ENST00000365201 102 ntBASIC1.28□□□□□ -2.2
PEX1O43933 MIR548G-201ENST00000408442 89 ntBASIC1.28□□□□□ -2.2
PEX1O43933 MIR18B-201ENST00000454574 71 ntBASIC1.28□□□□□ -2.2
PEX1O43933 SNORD79.1-201ENST00000516069 84 ntBASIC1.28□□□□□ -2.2
PEX1O43933 MIR4491-201ENST00000581087 68 ntBASIC1.28□□□□□ -2.2
PEX1O43933 AC020891.4-201ENST00000605745 93 ntBASIC1.28□□□□□ -2.2
PEX1O43933 RNU6-86P-201ENST00000606534 107 ntBASIC1.28□□□□□ -2.2
PEX1O43933 U7.3-201ENST00000616123 62 ntBASIC1.28□□□□□ -2.2
PEX1O43933 MIR2052-201ENST00000636055 55 ntBASIC1.28□□□□□ -2.2
PEX1O43933 Y_RNA.119-201ENST00000363301 96 ntBASIC1.27□□□□□ -2.21
PEX1O43933 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
PEX1O43933 RNU1-36P-201ENST00000365130 165 ntBASIC1.27□□□□□ -2.21
PEX1O43933 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.27□□□□□ -2.21
PEX1O43933 SNORA25.16-201ENST00000516741 121 ntBASIC1.27□□□□□ -2.21
PEX1O43933 AC106800.4-201ENST00000614905 153 ntBASIC1.27□□□□□ -2.21
PEX1O43933 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.27□□□□□ -2.21
PEX1O43933 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
PEX1O43933 Y_RNA.173-201ENST00000363776 113 ntBASIC1.26□□□□□ -2.21
PEX1O43933 SNORA80D-201ENST00000384488 135 ntBASIC1.26□□□□□ -2.21
PEX1O43933 SNORD93-201ENST00000408813 74 ntBASIC1.26□□□□□ -2.21
PEX1O43933 AL591704.2-201ENST00000421658 181 ntBASIC1.26□□□□□ -2.21
PEX1O43933 SPINT5P-201ENST00000448174 155 ntBASIC1.26□□□□□ -2.21
PEX1O43933 RNU7-185P-201ENST00000459215 60 ntBASIC1.26□□□□□ -2.21
PEX1O43933 MIR4500-201ENST00000579472 76 ntBASIC1.26□□□□□ -2.21
PEX1O43933 RNU6-90P-201ENST00000606352 106 ntBASIC1.26□□□□□ -2.21
PEX1O43933 AL353770.2-201ENST00000620024 78 ntBASIC1.26□□□□□ -2.21
PEX1O43933 AC023934.1-201ENST00000574529 2389 ntBASIC1.26□□□□□ -2.21
PEX1O43933 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
PEX1O43933 AC008163.1-202ENST00000636004 2889 ntBASIC1.25□□□□□ -2.21
PEX1O43933 HSBP1P2-201ENST00000299671 229 ntBASIC1.25□□□□□ -2.21
PEX1O43933 RNA5SP327-201ENST00000362494 101 ntBASIC1.25□□□□□ -2.21
PEX1O43933 RNU6-1244P-201ENST00000363614 108 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms