Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC007012.1-201ENST00000567192 175 ntBASIC-1.58□□□□□ -2.66
SSNA1O43805 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.58□□□□□ -2.66
SSNA1O43805 MIR4499-201ENST00000584834 69 ntBASIC-1.58□□□□□ -2.66
SSNA1O43805 uc_338.19-201ENST00000616808 99 ntBASIC-1.58□□□□□ -2.66
SSNA1O43805 UBE2WP1-201ENST00000362030 340 ntBASIC-1.59□□□□□ -2.66
SSNA1O43805 RNU6-728P-201ENST00000365375 104 ntBASIC-1.59□□□□□ -2.66
SSNA1O43805 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.59□□□□□ -2.66
SSNA1O43805 MIR517B-201ENST00000385102 67 ntBASIC-1.59□□□□□ -2.66
SSNA1O43805 MIR1912-201ENST00000410389 80 ntBASIC-1.59□□□□□ -2.66
SSNA1O43805 AC092794.1-201ENST00000612734 582 ntBASIC-1.59□□□□□ -2.66
SSNA1O43805 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.6□□□□□ -2.67
SSNA1O43805 RNU6-973P-201ENST00000364690 107 ntBASIC-1.6□□□□□ -2.67
SSNA1O43805 AC022137.1-201ENST00000483735 151 ntBASIC-1.6□□□□□ -2.67
SSNA1O43805 MIR5704-201ENST00000584029 77 ntBASIC-1.6□□□□□ -2.67
SSNA1O43805 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.61□□□□□ -2.67
SSNA1O43805 RNU6-121P-201ENST00000410525 99 ntBASIC-1.61□□□□□ -2.67
SSNA1O43805 RNU4-43P-201ENST00000410628 137 ntBASIC-1.61□□□□□ -2.67
SSNA1O43805 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.62□□□□□ -2.67
SSNA1O43805 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.62□□□□□ -2.67
SSNA1O43805 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.62□□□□□ -2.67
SSNA1O43805 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.62□□□□□ -2.67
SSNA1O43805 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.62□□□□□ -2.67
SSNA1O43805 MIR516A2-201ENST00000384888 90 ntBASIC-1.62□□□□□ -2.67
SSNA1O43805 MIR516A1-201ENST00000385033 90 ntBASIC-1.62□□□□□ -2.67
SSNA1O43805 RNU4-69P-201ENST00000410677 143 ntBASIC-1.62□□□□□ -2.67
SSNA1O43805 MIR4636-201ENST00000582271 80 ntBASIC-1.62□□□□□ -2.67
SSNA1O43805 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.63□□□□□ -2.67
SSNA1O43805 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.63□□□□□ -2.67
SSNA1O43805 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.63□□□□□ -2.67
SSNA1O43805 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.63□□□□□ -2.67
SSNA1O43805 RNU6-690P-201ENST00000365242 106 ntBASIC-1.63□□□□□ -2.67
SSNA1O43805 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.63□□□□□ -2.67
SSNA1O43805 AP000533.3-201ENST00000447704 118 ntBASIC-1.63□□□□□ -2.67
SSNA1O43805 RNU6-850P-201ENST00000516934 103 ntBASIC-1.63□□□□□ -2.67
SSNA1O43805 AC009779.6-201ENST00000603972 165 ntBASIC-1.63□□□□□ -2.67
SSNA1O43805 RNU2-4P-201ENST00000606190 192 ntBASIC-1.63□□□□□ -2.67
SSNA1O43805 MIR376B-201ENST00000614515 100 ntBASIC-1.63□□□□□ -2.67
SSNA1O43805 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.64□□□□□ -2.67
SSNA1O43805 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.64□□□□□ -2.67
SSNA1O43805 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.64□□□□□ -2.67
SSNA1O43805 RNU7-152P-201ENST00000458982 64 ntBASIC-1.64□□□□□ -2.67
SSNA1O43805 RNU6-274P-201ENST00000459566 107 ntBASIC-1.64□□□□□ -2.67
SSNA1O43805 RNU7-2P-201ENST00000516096 62 ntBASIC-1.64□□□□□ -2.67
SSNA1O43805 AC090574.1-201ENST00000623186 233 ntBASIC-1.64□□□□□ -2.67
SSNA1O43805 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.65□□□□□ -2.67
SSNA1O43805 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.65□□□□□ -2.67
SSNA1O43805 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.65□□□□□ -2.67
SSNA1O43805 SNORD116-2-201ENST00000384274 95 ntBASIC-1.65□□□□□ -2.67
SSNA1O43805 RNU6-472P-201ENST00000384299 107 ntBASIC-1.65□□□□□ -2.67
SSNA1O43805 SNORD116-6-201ENST00000384711 96 ntBASIC-1.65□□□□□ -2.67
SSNA1O43805 RNU6-381P-201ENST00000391259 108 ntBASIC-1.65□□□□□ -2.67
SSNA1O43805 MIR1302-11-201ENST00000408051 138 ntBASIC-1.65□□□□□ -2.67
SSNA1O43805 MIR1302-9-201ENST00000408365 138 ntBASIC-1.65□□□□□ -2.67
SSNA1O43805 MIR1302-10-201ENST00000408734 138 ntBASIC-1.65□□□□□ -2.67
SSNA1O43805 MTATP6P23-201ENST00000440153 476 ntBASIC-1.65□□□□□ -2.67
SSNA1O43805 MIR1302-2-201ENST00000607096 138 ntBASIC-1.65□□□□□ -2.67
SSNA1O43805 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.65□□□□□ -2.67
SSNA1O43805 SNORD95.1-201ENST00000364099 68 ntBASIC-1.66□□□□□ -2.68
SSNA1O43805 SNORD115-35-201ENST00000365122 82 ntBASIC-1.66□□□□□ -2.68
SSNA1O43805 SNORA63.7-201ENST00000365579 123 ntBASIC-1.66□□□□□ -2.68
SSNA1O43805 RNU6-431P-201ENST00000383874 107 ntBASIC-1.66□□□□□ -2.68
SSNA1O43805 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.66□□□□□ -2.68
SSNA1O43805 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1.66□□□□□ -2.68
SSNA1O43805 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.66□□□□□ -2.68
SSNA1O43805 AC087741.2-201ENST00000619415 172 ntBASIC-1.66□□□□□ -2.68
SSNA1O43805 TRDV1-202ENST00000621643 102 ntBASIC-1.66□□□□□ -2.68
SSNA1O43805 U6.100-201ENST00000636230 99 ntBASIC-1.66□□□□□ -2.68
SSNA1O43805 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.67□□□□□ -2.68
SSNA1O43805 RNU6-758P-201ENST00000516292 89 ntBASIC-1.67□□□□□ -2.68
SSNA1O43805 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.67□□□□□ -2.68
SSNA1O43805 AC140658.3-201ENST00000567603 271 ntBASIC-1.67□□□□□ -2.68
SSNA1O43805 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.68□□□□□ -2.68
SSNA1O43805 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.68□□□□□ -2.68
SSNA1O43805 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.68□□□□□ -2.68
SSNA1O43805 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.68□□□□□ -2.68
SSNA1O43805 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.68□□□□□ -2.68
SSNA1O43805 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.68□□□□□ -2.68
SSNA1O43805 SNORD64-201ENST00000386683 67 ntBASIC-1.68□□□□□ -2.68
SSNA1O43805 SCARNA18B-201ENST00000458806 135 ntBASIC-1.68□□□□□ -2.68
SSNA1O43805 RNU6-976P-201ENST00000516086 111 ntBASIC-1.68□□□□□ -2.68
SSNA1O43805 RNU6-277P-201ENST00000516272 106 ntBASIC-1.68□□□□□ -2.68
SSNA1O43805 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.68□□□□□ -2.68
SSNA1O43805 MIR6854-201ENST00000614935 69 ntBASIC-1.68□□□□□ -2.68
SSNA1O43805 RNA5SP368-201ENST00000364298 116 ntBASIC-1.69□□□□□ -2.68
SSNA1O43805 RNU6-476P-201ENST00000384726 107 ntBASIC-1.69□□□□□ -2.68
SSNA1O43805 SNORD77B-201ENST00000391112 67 ntBASIC-1.69□□□□□ -2.68
SSNA1O43805 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.69□□□□□ -2.68
SSNA1O43805 AL161932.1-201ENST00000437408 146 ntBASIC-1.69□□□□□ -2.68
SSNA1O43805 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.69□□□□□ -2.68
SSNA1O43805 MIR8068-201ENST00000618032 68 ntBASIC-1.69□□□□□ -2.68
SSNA1O43805 SNORD2-201ENST00000459163 69 ntBASIC-1.7□□□□□ -2.68
SSNA1O43805 RNA5SP236-201ENST00000516169 116 ntBASIC-1.7□□□□□ -2.68
SSNA1O43805 AC026407.1-201ENST00000518369 204 ntBASIC-1.7□□□□□ -2.68
SSNA1O43805 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.7□□□□□ -2.68
SSNA1O43805 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.7□□□□□ -2.68
SSNA1O43805 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.71□□□□□ -2.68
SSNA1O43805 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.71□□□□□ -2.68
SSNA1O43805 MIR147A-201ENST00000385079 72 ntBASIC-1.71□□□□□ -2.68
SSNA1O43805 Z95118.1-201ENST00000421372 247 ntBASIC-1.71□□□□□ -2.68
SSNA1O43805 AL121914.1-201ENST00000450188 156 ntBASIC-1.71□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 258.5 ms