Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HOXA2O43364 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HOXA2O43364 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
HOXA2O43364 RNU6-403P-201ENST00000363163 104 ntBASIC2.53□□□□□ -2
HOXA2O43364 Y_RNA.264-201ENST00000364665 102 ntBASIC2.53□□□□□ -2
HOXA2O43364 RNU6-132P-201ENST00000383863 107 ntBASIC2.53□□□□□ -2
HOXA2O43364 SNORA40.18-201ENST00000391200 128 ntBASIC2.53□□□□□ -2
HOXA2O43364 Y_RNA.588-201ENST00000391254 102 ntBASIC2.53□□□□□ -2
HOXA2O43364 MIR4299-201ENST00000577899 72 ntBASIC2.53□□□□□ -2
HOXA2O43364 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HOXA2O43364 MIR101-2-201ENST00000362195 79 ntBASIC2.52□□□□□ -2.01
HOXA2O43364 RNU6-654P-201ENST00000364373 107 ntBASIC2.52□□□□□ -2.01
HOXA2O43364 RNU1-36P-201ENST00000365130 165 ntBASIC2.52□□□□□ -2.01
HOXA2O43364 RNU6-411P-201ENST00000384451 107 ntBASIC2.52□□□□□ -2.01
HOXA2O43364 SCARNA18B-201ENST00000458806 135 ntBASIC2.52□□□□□ -2.01
HOXA2O43364 RNU7-106P-201ENST00000459514 67 ntBASIC2.52□□□□□ -2.01
HOXA2O43364 RNU6-237P-201ENST00000515985 71 ntBASIC2.52□□□□□ -2.01
HOXA2O43364 RNU6-1194P-201ENST00000516208 104 ntBASIC2.52□□□□□ -2.01
HOXA2O43364 SNRPGP19-201ENST00000603826 189 ntBASIC2.52□□□□□ -2.01
HOXA2O43364 RNU7-10P-201ENST00000607194 63 ntBASIC2.52□□□□□ -2.01
HOXA2O43364 MIR8063-201ENST00000621930 81 ntBASIC2.52□□□□□ -2.01
HOXA2O43364 AL359851.1-201ENST00000569460 4997 ntBASIC2.52□□□□□ -2.01
HOXA2O43364 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
HOXA2O43364 RNU6-580P-201ENST00000365159 107 ntBASIC2.51□□□□□ -2.01
HOXA2O43364 RNA5SP95-201ENST00000410319 137 ntBASIC2.51□□□□□ -2.01
HOXA2O43364 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXA2O43364 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXA2O43364 MIR1297-201ENST00000637311 77 ntBASIC2.51□□□□□ -2.01
HOXA2O43364 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HOXA2O43364 MIR635-201ENST00000384830 98 ntBASIC2.5□□□□□ -2.01
HOXA2O43364 AC015818.7-201ENST00000428754 109 ntBASIC2.5□□□□□ -2.01
HOXA2O43364 RNU6-523P-201ENST00000516304 54 ntBASIC2.5□□□□□ -2.01
HOXA2O43364 MIR3134-201ENST00000579433 74 ntBASIC2.5□□□□□ -2.01
HOXA2O43364 MIR4524B-201ENST00000581569 115 ntBASIC2.5□□□□□ -2.01
HOXA2O43364 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
HOXA2O43364 MIRLET7F1-201ENST00000362202 87 ntBASIC2.49□□□□□ -2.01
HOXA2O43364 RNU6-957P-201ENST00000363652 99 ntBASIC2.49□□□□□ -2.01
HOXA2O43364 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HOXA2O43364 SNORD100-201ENST00000408573 76 ntBASIC2.49□□□□□ -2.01
HOXA2O43364 RNU6-871P-201ENST00000516122 100 ntBASIC2.49□□□□□ -2.01
HOXA2O43364 MIR548H5-201ENST00000580314 60 ntBASIC2.49□□□□□ -2.01
HOXA2O43364 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
HOXA2O43364 AC080100.1-201ENST00000624239 5356 ntBASIC2.49□□□□□ -2.01
HOXA2O43364 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HOXA2O43364 RNU6-208P-201ENST00000362431 107 ntBASIC2.48□□□□□ -2.01
HOXA2O43364 RNU6-590P-201ENST00000365039 107 ntBASIC2.48□□□□□ -2.01
HOXA2O43364 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HOXA2O43364 SNORD114-1-201ENST00000362705 72 ntBASIC2.47□□□□□ -2.01
HOXA2O43364 Y_RNA.536-201ENST00000384621 113 ntBASIC2.47□□□□□ -2.01
HOXA2O43364 MIR518E-201ENST00000385252 88 ntBASIC2.47□□□□□ -2.01
HOXA2O43364 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
HOXA2O43364 MIR1257-201ENST00000408490 117 ntBASIC2.47□□□□□ -2.01
HOXA2O43364 SNORA31.11-201ENST00000516528 139 ntBASIC2.47□□□□□ -2.01
HOXA2O43364 MIR514B-201ENST00000516774 80 ntBASIC2.47□□□□□ -2.01
HOXA2O43364 AL096840.1-201ENST00000603287 93 ntBASIC2.47□□□□□ -2.01
HOXA2O43364 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.47□□□□□ -2.01
HOXA2O43364 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.46□□□□□ -2.02
HOXA2O43364 snoU13.9-201ENST00000458927 103 ntBASIC2.46□□□□□ -2.02
HOXA2O43364 Y_RNA.681-201ENST00000516445 113 ntBASIC2.46□□□□□ -2.02
HOXA2O43364 MIR6132-201ENST00000622083 109 ntBASIC2.46□□□□□ -2.02
HOXA2O43364 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.46□□□□□ -2.02
HOXA2O43364 AC023934.1-201ENST00000574529 2389 ntBASIC2.46□□□□□ -2.02
HOXA2O43364 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
HOXA2O43364 MIR519A1-201ENST00000385257 85 ntBASIC2.45□□□□□ -2.02
HOXA2O43364 snoU13.23-201ENST00000458863 104 ntBASIC2.45□□□□□ -2.02
HOXA2O43364 MIR4484-201ENST00000582855 83 ntBASIC2.45□□□□□ -2.02
HOXA2O43364 MIR3670-2-201ENST00000582974 65 ntBASIC2.45□□□□□ -2.02
HOXA2O43364 MIR3670-1-201ENST00000584160 65 ntBASIC2.45□□□□□ -2.02
HOXA2O43364 MIR3670-3-201ENST00000584855 65 ntBASIC2.45□□□□□ -2.02
HOXA2O43364 MIR3670-4-201ENST00000612260 65 ntBASIC2.45□□□□□ -2.02
HOXA2O43364 SNORD33-201ENST00000362761 85 ntBASIC2.44□□□□□ -2.02
HOXA2O43364 SNORA67.3-201ENST00000384366 140 ntBASIC2.44□□□□□ -2.02
HOXA2O43364 RNU6-1065P-201ENST00000384513 106 ntBASIC2.44□□□□□ -2.02
HOXA2O43364 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.44□□□□□ -2.02
HOXA2O43364 RNU7-195P-201ENST00000458793 62 ntBASIC2.44□□□□□ -2.02
HOXA2O43364 RNU7-185P-201ENST00000459215 60 ntBASIC2.44□□□□□ -2.02
HOXA2O43364 TRAJ51-201ENST00000504127 63 ntBASIC2.44□□□□□ -2.02
HOXA2O43364 AC013244.2-201ENST00000603396 103 ntBASIC2.44□□□□□ -2.02
HOXA2O43364 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.44□□□□□ -2.02
HOXA2O43364 MIR6766-201ENST00000622641 72 ntBASIC2.44□□□□□ -2.02
HOXA2O43364 RNU5F-1-201ENST00000362507 117 ntBASIC2.43□□□□□ -2.02
HOXA2O43364 Y_RNA.532-201ENST00000384590 113 ntBASIC2.43□□□□□ -2.02
HOXA2O43364 MIR520H-201ENST00000385126 88 ntBASIC2.43□□□□□ -2.02
HOXA2O43364 MIR221-201ENST00000385135 110 ntBASIC2.43□□□□□ -2.02
HOXA2O43364 HMGN2P19-201ENST00000425149 265 ntBASIC2.43□□□□□ -2.02
HOXA2O43364 AC079140.2-201ENST00000506193 142 ntBASIC2.43□□□□□ -2.02
HOXA2O43364 Y_RNA.809-201ENST00000516058 95 ntBASIC2.43□□□□□ -2.02
HOXA2O43364 RNU6-448P-201ENST00000517052 107 ntBASIC2.43□□□□□ -2.02
HOXA2O43364 RNU6-303P-201ENST00000517091 106 ntBASIC2.43□□□□□ -2.02
HOXA2O43364 AC019176.1-201ENST00000518519 225 ntBASIC2.43□□□□□ -2.02
HOXA2O43364 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.43□□□□□ -2.02
HOXA2O43364 MIR219B-201ENST00000637023 88 ntBASIC2.43□□□□□ -2.02
HOXA2O43364 Y_RNA.56-201ENST00000362798 112 ntBASIC2.42□□□□□ -2.02
HOXA2O43364 MIR676-201ENST00000390702 67 ntBASIC2.42□□□□□ -2.02
HOXA2O43364 U8.13-201ENST00000390842 128 ntBASIC2.42□□□□□ -2.02
HOXA2O43364 RPL23AP42-201ENST00000471152 471 ntBASIC2.42□□□□□ -2.02
HOXA2O43364 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.42□□□□□ -2.02
HOXA2O43364 RNA5SP200-201ENST00000516360 103 ntBASIC2.42□□□□□ -2.02
HOXA2O43364 RNU6-70P-201ENST00000516438 60 ntBASIC2.42□□□□□ -2.02
HOXA2O43364 RNU6-539P-201ENST00000516665 103 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms