Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RNU7-6P-201ENST00000516845 62 ntBASIC0.66□□□□□ -2.3
CDX4O14627 RNU6-789P-201ENST00000517105 102 ntBASIC0.66□□□□□ -2.3
CDX4O14627 RNU7-35P-201ENST00000517174 62 ntBASIC0.66□□□□□ -2.3
CDX4O14627 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.66□□□□□ -2.3
CDX4O14627 MIR4771-2-201ENST00000577758 74 ntBASIC0.66□□□□□ -2.3
CDX4O14627 MIR4771-1-201ENST00000582617 74 ntBASIC0.66□□□□□ -2.3
CDX4O14627 AC023934.1-201ENST00000574529 2389 ntBASIC0.65□□□□□ -2.3
CDX4O14627 RNU6-369P-201ENST00000362515 102 ntBASIC0.65□□□□□ -2.31
CDX4O14627 RNU6-716P-201ENST00000365621 103 ntBASIC0.65□□□□□ -2.31
CDX4O14627 RNU6-1117P-201ENST00000384525 104 ntBASIC0.65□□□□□ -2.31
CDX4O14627 MIR608-201ENST00000384820 100 ntBASIC0.65□□□□□ -2.31
CDX4O14627 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.65□□□□□ -2.31
CDX4O14627 RPS26P5-201ENST00000418544 335 ntBASIC0.65□□□□□ -2.31
CDX4O14627 AC098934.3-201ENST00000430450 190 ntBASIC0.65□□□□□ -2.31
CDX4O14627 AC092628.1-201ENST00000436250 252 ntBASIC0.65□□□□□ -2.31
CDX4O14627 MIR18B-201ENST00000454574 71 ntBASIC0.65□□□□□ -2.31
CDX4O14627 RNU6-406P-201ENST00000516470 107 ntBASIC0.65□□□□□ -2.31
CDX4O14627 Y_RNA.712-201ENST00000517011 92 ntBASIC0.65□□□□□ -2.31
CDX4O14627 AC020891.4-201ENST00000605745 93 ntBASIC0.65□□□□□ -2.31
CDX4O14627 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.65□□□□□ -2.31
CDX4O14627 AC243829.3-201ENST00000622177 108 ntBASIC0.65□□□□□ -2.31
CDX4O14627 MIR3914-2-201ENST00000637339 95 ntBASIC0.65□□□□□ -2.31
CDX4O14627 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.31
CDX4O14627 Y_RNA.213-201ENST00000364178 111 ntBASIC0.64□□□□□ -2.31
CDX4O14627 Y_RNA.299-201ENST00000364973 94 ntBASIC0.64□□□□□ -2.31
CDX4O14627 RNU6-949P-201ENST00000384040 107 ntBASIC0.64□□□□□ -2.31
CDX4O14627 RNU6-22P-201ENST00000384355 107 ntBASIC0.64□□□□□ -2.31
CDX4O14627 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
CDX4O14627 U8.15-201ENST00000390947 134 ntBASIC0.64□□□□□ -2.31
CDX4O14627 SNORD89-201ENST00000390981 114 ntBASIC0.64□□□□□ -2.31
CDX4O14627 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
CDX4O14627 SNORD67.1-201ENST00000516618 108 ntBASIC0.64□□□□□ -2.31
CDX4O14627 MIR4653-201ENST00000585107 83 ntBASIC0.64□□□□□ -2.31
CDX4O14627 AL359881.1-201ENST00000602916 267 ntBASIC0.64□□□□□ -2.31
CDX4O14627 AC105081.1-201ENST00000617727 106 ntBASIC0.64□□□□□ -2.31
CDX4O14627 AC087741.2-201ENST00000619415 172 ntBASIC0.64□□□□□ -2.31
CDX4O14627 MIR1-1-201ENST00000362147 71 ntBASIC0.63□□□□□ -2.31
CDX4O14627 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
CDX4O14627 SNORD113-1-201ENST00000365321 69 ntBASIC0.63□□□□□ -2.31
CDX4O14627 Y_RNA.346-201ENST00000365385 112 ntBASIC0.63□□□□□ -2.31
CDX4O14627 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CDX4O14627 RNU6-616P-201ENST00000384353 107 ntBASIC0.63□□□□□ -2.31
CDX4O14627 MIR605-201ENST00000385078 83 ntBASIC0.63□□□□□ -2.31
CDX4O14627 MT-TF-201ENST00000387314 71 ntBASIC0.63□□□□□ -2.31
CDX4O14627 MIR759-201ENST00000390224 91 ntBASIC0.63□□□□□ -2.31
CDX4O14627 SNORD93-201ENST00000408813 74 ntBASIC0.63□□□□□ -2.31
CDX4O14627 AC096949.1-201ENST00000412047 152 ntBASIC0.63□□□□□ -2.31
CDX4O14627 AL606490.4-201ENST00000423117 127 ntBASIC0.63□□□□□ -2.31
CDX4O14627 AC008267.6-201ENST00000441664 139 ntBASIC0.63□□□□□ -2.31
CDX4O14627 RPL39P25-201ENST00000449384 154 ntBASIC0.63□□□□□ -2.31
CDX4O14627 RNU7-185P-201ENST00000459215 60 ntBASIC0.63□□□□□ -2.31
CDX4O14627 SNORD33.1-201ENST00000516213 88 ntBASIC0.63□□□□□ -2.31
CDX4O14627 RNU6-62P-201ENST00000516526 102 ntBASIC0.63□□□□□ -2.31
CDX4O14627 MIR3163-201ENST00000581592 73 ntBASIC0.63□□□□□ -2.31
CDX4O14627 MIR4676-201ENST00000583078 72 ntBASIC0.63□□□□□ -2.31
CDX4O14627 Y_RNA.773-201ENST00000607168 90 ntBASIC0.63□□□□□ -2.31
CDX4O14627 U2.22-201ENST00000636441 106 ntBASIC0.63□□□□□ -2.31
CDX4O14627 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.62□□□□□ -2.31
CDX4O14627 HSBP1P2-201ENST00000299671 229 ntBASIC0.62□□□□□ -2.31
CDX4O14627 RNU6-1335P-201ENST00000365426 107 ntBASIC0.62□□□□□ -2.31
CDX4O14627 MIR548A1-201ENST00000385041 97 ntBASIC0.62□□□□□ -2.31
CDX4O14627 RNU6-1168P-201ENST00000390831 104 ntBASIC0.62□□□□□ -2.31
CDX4O14627 RNU6-1154P-201ENST00000391001 104 ntBASIC0.62□□□□□ -2.31
CDX4O14627 SNORD77B-201ENST00000391112 67 ntBASIC0.62□□□□□ -2.31
CDX4O14627 MIR1827-201ENST00000408549 66 ntBASIC0.62□□□□□ -2.31
CDX4O14627 Y_RNA.649-201ENST00000459077 103 ntBASIC0.62□□□□□ -2.31
CDX4O14627 RNU6-977P-201ENST00000516411 103 ntBASIC0.62□□□□□ -2.31
CDX4O14627 RNU7-137P-201ENST00000516788 62 ntBASIC0.62□□□□□ -2.31
CDX4O14627 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
CDX4O14627 MIR520F-201ENST00000384824 87 ntBASIC0.61□□□□□ -2.31
CDX4O14627 MIR548D2-201ENST00000384955 97 ntBASIC0.61□□□□□ -2.31
CDX4O14627 MIR125B2-201ENST00000385128 89 ntBASIC0.61□□□□□ -2.31
CDX4O14627 RNU6-1307P-201ENST00000391012 103 ntBASIC0.61□□□□□ -2.31
CDX4O14627 MIR1257-201ENST00000408490 117 ntBASIC0.61□□□□□ -2.31
CDX4O14627 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.61□□□□□ -2.31
CDX4O14627 RNA5SP395-201ENST00000516567 118 ntBASIC0.61□□□□□ -2.31
CDX4O14627 MIR4491-201ENST00000581087 68 ntBASIC0.61□□□□□ -2.31
CDX4O14627 AL353765.1-201ENST00000605514 183 ntBASIC0.61□□□□□ -2.31
CDX4O14627 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.61□□□□□ -2.31
CDX4O14627 MIR2909-201ENST00000617113 69 ntBASIC0.61□□□□□ -2.31
CDX4O14627 MIR1255B1-201ENST00000636325 63 ntBASIC0.61□□□□□ -2.31
CDX4O14627 RNU6-403P-201ENST00000363163 104 ntBASIC0.6□□□□□ -2.31
CDX4O14627 Y_RNA.344-201ENST00000365381 112 ntBASIC0.6□□□□□ -2.31
CDX4O14627 Y_RNA.353-201ENST00000365440 108 ntBASIC0.6□□□□□ -2.31
CDX4O14627 RNU6-110P-201ENST00000384508 104 ntBASIC0.6□□□□□ -2.31
CDX4O14627 MIR206-201ENST00000384872 86 ntBASIC0.6□□□□□ -2.31
CDX4O14627 MIR548A3-201ENST00000385297 97 ntBASIC0.6□□□□□ -2.31
CDX4O14627 RNU4-83P-201ENST00000410863 133 ntBASIC0.6□□□□□ -2.31
CDX4O14627 RNU7-156P-201ENST00000517214 74 ntBASIC0.6□□□□□ -2.31
CDX4O14627 MIR4804-201ENST00000581683 73 ntBASIC0.6□□□□□ -2.31
CDX4O14627 U6.95-201ENST00000636931 70 ntBASIC0.6□□□□□ -2.31
CDX4O14627 SNORD114-10-201ENST00000363409 72 ntBASIC0.59□□□□□ -2.31
CDX4O14627 RNY4P6-201ENST00000363667 96 ntBASIC0.59□□□□□ -2.31
CDX4O14627 RNA5SP205-201ENST00000364653 136 ntBASIC0.59□□□□□ -2.31
CDX4O14627 RNU6-364P-201ENST00000384387 107 ntBASIC0.59□□□□□ -2.31
CDX4O14627 Y_RNA.549-201ENST00000384657 102 ntBASIC0.59□□□□□ -2.31
CDX4O14627 Y_RNA.563-201ENST00000384707 108 ntBASIC0.59□□□□□ -2.31
CDX4O14627 RNU6-1321P-201ENST00000390905 107 ntBASIC0.59□□□□□ -2.31
CDX4O14627 Y_RNA.588-201ENST00000391254 102 ntBASIC0.59□□□□□ -2.31
CDX4O14627 MIR938-201ENST00000401216 83 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms