Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 MIR1302-1-201ENST00000637932 143 ntBASIC-0.97□□□□□ -2.56
SDCBPO00560 MIR20A-201ENST00000362279 71 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 RNU6-450P-201ENST00000364654 107 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 RNU6-806P-201ENST00000365147 105 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 RNU6-728P-201ENST00000365375 104 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 SNORA79-201ENST00000408376 140 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 RNU6-721P-201ENST00000410155 105 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 Z83846.1-201ENST00000446798 265 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 FGF7P6-202ENST00000451282 293 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 SNORD116-25-201ENST00000516517 92 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 RNU6-881P-201ENST00000516813 102 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 AP001362.1-201ENST00000625165 124 ntBASIC-0.98□□□□□ -2.57
SDCBPO00560 SNORD115-44-201ENST00000365391 82 ntBASIC-0.99□□□□□ -2.57
SDCBPO00560 MIR652-201ENST00000385278 98 ntBASIC-0.99□□□□□ -2.57
SDCBPO00560 RNU7-55P-201ENST00000459426 62 ntBASIC-0.99□□□□□ -2.57
SDCBPO00560 SNORD19B-201ENST00000459623 84 ntBASIC-0.99□□□□□ -2.57
SDCBPO00560 RNU6-287P-201ENST00000516230 98 ntBASIC-0.99□□□□□ -2.57
SDCBPO00560 AC108676.2-201ENST00000605225 163 ntBASIC-0.99□□□□□ -2.57
SDCBPO00560 Y_RNA.98-201ENST00000363109 102 ntBASIC-1□□□□□ -2.57
SDCBPO00560 Y_RNA.318-201ENST00000365131 97 ntBASIC-1□□□□□ -2.57
SDCBPO00560 SNORA63.7-201ENST00000365579 123 ntBASIC-1□□□□□ -2.57
SDCBPO00560 Y_RNA.384-201ENST00000383909 102 ntBASIC-1□□□□□ -2.57
SDCBPO00560 Y_RNA.389-201ENST00000383924 113 ntBASIC-1□□□□□ -2.57
SDCBPO00560 SNORD116-4-201ENST00000384733 96 ntBASIC-1□□□□□ -2.57
SDCBPO00560 MT-TQ-201ENST00000387372 72 ntBASIC-1□□□□□ -2.57
SDCBPO00560 RNA5SP236-201ENST00000516169 116 ntBASIC-1□□□□□ -2.57
SDCBPO00560 AC009779.6-201ENST00000603972 165 ntBASIC-1□□□□□ -2.57
SDCBPO00560 AL132765.2-201ENST00000610812 351 ntBASIC-1□□□□□ -2.57
SDCBPO00560 AC093783.1-201ENST00000612976 329 ntBASIC-1□□□□□ -2.57
SDCBPO00560 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.01□□□□□ -2.57
SDCBPO00560 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.01□□□□□ -2.57
SDCBPO00560 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.01□□□□□ -2.57
SDCBPO00560 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.01□□□□□ -2.57
SDCBPO00560 MIR516A2-201ENST00000384888 90 ntBASIC-1.01□□□□□ -2.57
SDCBPO00560 MIR516A1-201ENST00000385033 90 ntBASIC-1.01□□□□□ -2.57
SDCBPO00560 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
SDCBPO00560 RNU6-823P-201ENST00000391042 103 ntBASIC-1.01□□□□□ -2.57
SDCBPO00560 Z95118.1-201ENST00000421372 247 ntBASIC-1.01□□□□□ -2.57
SDCBPO00560 ELOCP20-201ENST00000422460 345 ntBASIC-1.01□□□□□ -2.57
SDCBPO00560 AC244090.1-201ENST00000441884 93 ntBASIC-1.01□□□□□ -2.57
SDCBPO00560 SNORD2.1-201ENST00000458762 69 ntBASIC-1.01□□□□□ -2.57
SDCBPO00560 SERF1AP1-201ENST00000514575 187 ntBASIC-1.01□□□□□ -2.57
SDCBPO00560 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.01□□□□□ -2.57
SDCBPO00560 RNU2-4P-201ENST00000606190 192 ntBASIC-1.01□□□□□ -2.57
SDCBPO00560 MIR376B-201ENST00000614515 100 ntBASIC-1.01□□□□□ -2.57
SDCBPO00560 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.02□□□□□ -2.57
SDCBPO00560 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.02□□□□□ -2.57
SDCBPO00560 RNA5SP368-201ENST00000364298 116 ntBASIC-1.02□□□□□ -2.57
SDCBPO00560 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.02□□□□□ -2.57
SDCBPO00560 RNU6-571P-201ENST00000384128 107 ntBASIC-1.02□□□□□ -2.57
SDCBPO00560 MIR196A1-201ENST00000388006 70 ntBASIC-1.02□□□□□ -2.57
SDCBPO00560 RNU4-69P-201ENST00000410677 143 ntBASIC-1.02□□□□□ -2.57
SDCBPO00560 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.02□□□□□ -2.57
SDCBPO00560 RNU6-850P-201ENST00000516934 103 ntBASIC-1.02□□□□□ -2.57
SDCBPO00560 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.02□□□□□ -2.57
SDCBPO00560 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.02□□□□□ -2.57
SDCBPO00560 MTND5P18-201ENST00000445624 1801 ntBASIC-1.03□□□□□ -2.57
SDCBPO00560 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.03□□□□□ -2.57
SDCBPO00560 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.03□□□□□ -2.57
SDCBPO00560 RNU4-36P-201ENST00000364294 144 ntBASIC-1.03□□□□□ -2.57
SDCBPO00560 RNU6-690P-201ENST00000365242 106 ntBASIC-1.03□□□□□ -2.57
SDCBPO00560 RNU4-63P-201ENST00000411313 118 ntBASIC-1.03□□□□□ -2.57
SDCBPO00560 MTND5P22-201ENST00000458380 195 ntBASIC-1.03□□□□□ -2.57
SDCBPO00560 RNU7-2P-201ENST00000516096 62 ntBASIC-1.03□□□□□ -2.57
SDCBPO00560 AC007012.1-201ENST00000567192 175 ntBASIC-1.03□□□□□ -2.57
SDCBPO00560 MIR3681-201ENST00000580089 72 ntBASIC-1.03□□□□□ -2.57
SDCBPO00560 AL365265.1-201ENST00000621045 234 ntBASIC-1.03□□□□□ -2.57
SDCBPO00560 SNORD115-25-201ENST00000362619 82 ntBASIC-1.04□□□□□ -2.58
SDCBPO00560 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.04□□□□□ -2.58
SDCBPO00560 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.04□□□□□ -2.58
SDCBPO00560 RNU6-472P-201ENST00000384299 107 ntBASIC-1.04□□□□□ -2.58
SDCBPO00560 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.04□□□□□ -2.58
SDCBPO00560 MIR1252-201ENST00000408861 65 ntBASIC-1.04□□□□□ -2.58
SDCBPO00560 AL161932.1-201ENST00000437408 146 ntBASIC-1.04□□□□□ -2.58
SDCBPO00560 AL442663.2-201ENST00000554385 511 ntBASIC-1.04□□□□□ -2.58
SDCBPO00560 MIR3179-1-201ENST00000578940 84 ntBASIC-1.04□□□□□ -2.58
SDCBPO00560 MIR3179-2-201ENST00000579107 84 ntBASIC-1.04□□□□□ -2.58
SDCBPO00560 MIR3179-3-201ENST00000579566 84 ntBASIC-1.04□□□□□ -2.58
SDCBPO00560 MIR5704-201ENST00000584029 77 ntBASIC-1.04□□□□□ -2.58
SDCBPO00560 MIR3179-4-201ENST00000617599 84 ntBASIC-1.04□□□□□ -2.58
SDCBPO00560 AC087741.2-201ENST00000619415 172 ntBASIC-1.04□□□□□ -2.58
SDCBPO00560 U6.100-201ENST00000636230 99 ntBASIC-1.04□□□□□ -2.58
SDCBPO00560 SNORD114-25-201ENST00000363742 72 ntBASIC-1.05□□□□□ -2.58
SDCBPO00560 SNORD95.1-201ENST00000364099 68 ntBASIC-1.05□□□□□ -2.58
SDCBPO00560 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.05□□□□□ -2.58
SDCBPO00560 AL121914.1-201ENST00000450188 156 ntBASIC-1.05□□□□□ -2.58
SDCBPO00560 AC074198.2-201ENST00000508153 258 ntBASIC-1.05□□□□□ -2.58
SDCBPO00560 RNU7-123P-201ENST00000515911 60 ntBASIC-1.05□□□□□ -2.58
SDCBPO00560 RNU6-240P-201ENST00000516098 97 ntBASIC-1.05□□□□□ -2.58
SDCBPO00560 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.06□□□□□ -2.58
SDCBPO00560 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.06□□□□□ -2.58
SDCBPO00560 RNU6-770P-201ENST00000363929 105 ntBASIC-1.06□□□□□ -2.58
SDCBPO00560 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms