Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AP003327.1-201ENST00000529684 127 ntBASIC0.45□□□□□ -2.34
O00370 MIR3144-201ENST00000579460 79 ntBASIC0.45□□□□□ -2.34
O00370 AL359881.1-201ENST00000602916 267 ntBASIC0.45□□□□□ -2.34
O00370 SNORA25.18-201ENST00000607153 114 ntBASIC0.45□□□□□ -2.34
O00370 FTX_2.1-201ENST00000618816 94 ntBASIC0.45□□□□□ -2.34
O00370 Y_RNA.30-201ENST00000362572 97 ntBASIC0.44□□□□□ -2.34
O00370 SNORD115-2-201ENST00000362842 82 ntBASIC0.44□□□□□ -2.34
O00370 Y_RNA.258-201ENST00000364613 105 ntBASIC0.44□□□□□ -2.34
O00370 SNORD115-20-201ENST00000365099 82 ntBASIC0.44□□□□□ -2.34
O00370 SNORD77B-201ENST00000391112 67 ntBASIC0.44□□□□□ -2.34
O00370 SNORA68.3-201ENST00000515906 83 ntBASIC0.44□□□□□ -2.34
O00370 SNORA31.14-201ENST00000516728 116 ntBASIC0.44□□□□□ -2.34
O00370 RNU7-137P-201ENST00000516788 62 ntBASIC0.44□□□□□ -2.34
O00370 RNA5SP330-201ENST00000517096 96 ntBASIC0.44□□□□□ -2.34
O00370 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.44□□□□□ -2.34
O00370 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.44□□□□□ -2.34
O00370 uc_338.16-201ENST00000621804 95 ntBASIC0.44□□□□□ -2.34
O00370 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
O00370 MIR101-2-201ENST00000362195 79 ntBASIC0.43□□□□□ -2.34
O00370 RNU4-58P-201ENST00000363192 141 ntBASIC0.43□□□□□ -2.34
O00370 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
O00370 RNA5SP517-201ENST00000364724 117 ntBASIC0.43□□□□□ -2.34
O00370 Y_RNA.420-201ENST00000384043 110 ntBASIC0.43□□□□□ -2.34
O00370 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
O00370 Y_RNA.536-201ENST00000384621 113 ntBASIC0.43□□□□□ -2.34
O00370 RNU6-291P-201ENST00000384720 107 ntBASIC0.43□□□□□ -2.34
O00370 RNU4-69P-201ENST00000410677 143 ntBASIC0.43□□□□□ -2.34
O00370 RNU6-394P-201ENST00000410735 107 ntBASIC0.43□□□□□ -2.34
O00370 RNA5SP272-201ENST00000516095 111 ntBASIC0.43□□□□□ -2.34
O00370 Y_RNA.692-201ENST00000516627 105 ntBASIC0.43□□□□□ -2.34
O00370 RNU6-765P-201ENST00000516916 99 ntBASIC0.43□□□□□ -2.34
O00370 MTND5P41-201ENST00000517498 206 ntBASIC0.43□□□□□ -2.34
O00370 AP001328.1-201ENST00000528550 176 ntBASIC0.43□□□□□ -2.34
O00370 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.43□□□□□ -2.34
O00370 MIR924-201ENST00000638017 53 ntBASIC0.43□□□□□ -2.34
O00370 Y_RNA.115-201ENST00000363272 98 ntBASIC0.42□□□□□ -2.34
O00370 RNU6-1229P-201ENST00000364295 107 ntBASIC0.42□□□□□ -2.34
O00370 Y_RNA.294-201ENST00000364916 102 ntBASIC0.42□□□□□ -2.34
O00370 RNU6-886P-201ENST00000384319 105 ntBASIC0.42□□□□□ -2.34
O00370 PCNPP3-201ENST00000393579 471 ntBASIC0.42□□□□□ -2.34
O00370 RNU7-197P-201ENST00000458836 62 ntBASIC0.42□□□□□ -2.34
O00370 MIR548X2-201ENST00000579776 100 ntBASIC0.42□□□□□ -2.34
O00370 AC021753.1-201ENST00000635724 168 ntBASIC0.42□□□□□ -2.34
O00370 Y_RNA.374-201ENST00000365606 101 ntBASIC0.41□□□□□ -2.34
O00370 Y_RNA.448-201ENST00000384185 108 ntBASIC0.41□□□□□ -2.34
O00370 Y_RNA.580-201ENST00000391004 95 ntBASIC0.41□□□□□ -2.34
O00370 AC138749.4-201ENST00000563970 127 ntBASIC0.41□□□□□ -2.34
O00370 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
O00370 MIR8087-201ENST00000612745 78 ntBASIC0.41□□□□□ -2.34
O00370 Y_RNA.119-201ENST00000363301 96 ntBASIC0.4□□□□□ -2.35
O00370 SNORA63.5-201ENST00000363548 123 ntBASIC0.4□□□□□ -2.35
O00370 Y_RNA.215-201ENST00000364204 112 ntBASIC0.4□□□□□ -2.35
O00370 Y_RNA.299-201ENST00000364973 94 ntBASIC0.4□□□□□ -2.35
O00370 RNU6-1104P-201ENST00000384723 104 ntBASIC0.4□□□□□ -2.35
O00370 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
O00370 SUMO1P3-201ENST00000439961 304 ntBASIC0.4□□□□□ -2.35
O00370 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
O00370 MIR1270-201ENST00000459320 83 ntBASIC0.4□□□□□ -2.35
O00370 RN7SKP12-201ENST00000516275 143 ntBASIC0.4□□□□□ -2.35
O00370 AC098479.1-201ENST00000609225 154 ntBASIC0.4□□□□□ -2.35
O00370 SNORD114-10-201ENST00000363409 72 ntBASIC0.39□□□□□ -2.35
O00370 RNA5SP457-201ENST00000363657 124 ntBASIC0.39□□□□□ -2.35
O00370 Y_RNA.174-201ENST00000363781 105 ntBASIC0.39□□□□□ -2.35
O00370 Y_RNA.400-201ENST00000383963 111 ntBASIC0.39□□□□□ -2.35
O00370 SNORA8.2-201ENST00000384372 139 ntBASIC0.39□□□□□ -2.35
O00370 MIR1263-201ENST00000408324 86 ntBASIC0.39□□□□□ -2.35
O00370 SNORA40.8-201ENST00000411034 126 ntBASIC0.39□□□□□ -2.35
O00370 MIR330-201ENST00000362196 94 ntBASIC0.38□□□□□ -2.35
O00370 Y_RNA.114-201ENST00000363265 113 ntBASIC0.38□□□□□ -2.35
O00370 RNU6-716P-201ENST00000365621 103 ntBASIC0.38□□□□□ -2.35
O00370 VTRNA1-3-201ENST00000365645 89 ntBASIC0.38□□□□□ -2.35
O00370 MIR206-201ENST00000384872 86 ntBASIC0.38□□□□□ -2.35
O00370 RNU6-1321P-201ENST00000390905 107 ntBASIC0.38□□□□□ -2.35
O00370 RNU7-6P-201ENST00000516845 62 ntBASIC0.38□□□□□ -2.35
O00370 RNU6-616P-201ENST00000384353 107 ntBASIC0.37□□□□□ -2.35
O00370 Y_RNA.488-201ENST00000384403 102 ntBASIC0.37□□□□□ -2.35
O00370 MIR518A1-201ENST00000385068 85 ntBASIC0.37□□□□□ -2.35
O00370 MIR569-201ENST00000385228 96 ntBASIC0.37□□□□□ -2.35
O00370 MIR1197-201ENST00000408818 88 ntBASIC0.37□□□□□ -2.35
O00370 RNU6-426P-201ENST00000516464 97 ntBASIC0.37□□□□□ -2.35
O00370 RNU6-794P-201ENST00000517261 64 ntBASIC0.37□□□□□ -2.35
O00370 MIR4500-201ENST00000579472 76 ntBASIC0.37□□□□□ -2.35
O00370 RNU6-865P-201ENST00000364772 107 ntBASIC0.36□□□□□ -2.35
O00370 RNY1P2-201ENST00000364820 117 ntBASIC0.36□□□□□ -2.35
O00370 MIRLET7F2-201ENST00000385277 83 ntBASIC0.36□□□□□ -2.35
O00370 RNU7-48P-201ENST00000458875 63 ntBASIC0.36□□□□□ -2.35
O00370 RNA5SP227-201ENST00000516184 113 ntBASIC0.36□□□□□ -2.35
O00370 IGKV1-22-201ENST00000524313 326 ntBASIC0.36□□□□□ -2.35
O00370 MIR3121-201ENST00000579680 77 ntBASIC0.36□□□□□ -2.35
O00370 MIR3671-201ENST00000580455 88 ntBASIC0.36□□□□□ -2.35
O00370 AL109933.3-201ENST00000619095 188 ntBASIC0.36□□□□□ -2.35
O00370 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.36□□□□□ -2.35
O00370 MIR103A1-201ENST00000362165 78 ntBASIC0.35□□□□□ -2.35
O00370 MIRLET7D-201ENST00000362263 87 ntBASIC0.35□□□□□ -2.35
O00370 SNORA36.1-201ENST00000363424 132 ntBASIC0.35□□□□□ -2.35
O00370 RNA5SP245-201ENST00000364239 121 ntBASIC0.35□□□□□ -2.35
O00370 AC108059.2-201ENST00000434626 151 ntBASIC0.35□□□□□ -2.35
O00370 RNA5SP268-201ENST00000516828 124 ntBASIC0.35□□□□□ -2.35
O00370 RNU6-235P-201ENST00000362644 107 ntBASIC0.34□□□□□ -2.36
O00370 Y_RNA.49-201ENST00000362714 112 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms