Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 MTND5P40-201ENST00000559945 246 ntBASIC-0.83□□□□□ -2.54
DFFAO00273 AC096720.1-201ENST00000604441 183 ntBASIC-0.83□□□□□ -2.54
DFFAO00273 AC139792.2-201ENST00000624218 587 ntBASIC-0.83□□□□□ -2.54
DFFAO00273 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.84□□□□□ -2.54
DFFAO00273 MIR548I2-201ENST00000408348 149 ntBASIC-0.84□□□□□ -2.54
DFFAO00273 RPS29P8-201ENST00000445109 171 ntBASIC-0.84□□□□□ -2.54
DFFAO00273 AL442663.2-201ENST00000554385 511 ntBASIC-0.84□□□□□ -2.54
DFFAO00273 MIR181B2-201ENST00000385004 89 ntBASIC-0.85□□□□□ -2.55
DFFAO00273 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
DFFAO00273 SNORD75.1-201ENST00000408373 60 ntBASIC-0.85□□□□□ -2.55
DFFAO00273 RNU7-48P-201ENST00000458875 63 ntBASIC-0.85□□□□□ -2.55
DFFAO00273 MIR1270-201ENST00000459320 83 ntBASIC-0.85□□□□□ -2.55
DFFAO00273 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.85□□□□□ -2.55
DFFAO00273 RNU6-758P-201ENST00000516292 89 ntBASIC-0.85□□□□□ -2.55
DFFAO00273 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.86□□□□□ -2.55
DFFAO00273 MIR224-201ENST00000384889 81 ntBASIC-0.86□□□□□ -2.55
DFFAO00273 AL603914.1-201ENST00000401964 204 ntBASIC-0.86□□□□□ -2.55
DFFAO00273 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.86□□□□□ -2.55
DFFAO00273 Z95118.1-201ENST00000421372 247 ntBASIC-0.86□□□□□ -2.55
DFFAO00273 RNU7-195P-201ENST00000458793 62 ntBASIC-0.86□□□□□ -2.55
DFFAO00273 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.86□□□□□ -2.55
DFFAO00273 MIR4795-201ENST00000584182 89 ntBASIC-0.86□□□□□ -2.55
DFFAO00273 AC069503.3-201ENST00000618674 145 ntBASIC-0.86□□□□□ -2.55
DFFAO00273 uc_338.10-201ENST00000621872 182 ntBASIC-0.86□□□□□ -2.55
DFFAO00273 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.87□□□□□ -2.55
DFFAO00273 SNORA25.7-201ENST00000364375 127 ntBASIC-0.87□□□□□ -2.55
DFFAO00273 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.87□□□□□ -2.55
DFFAO00273 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.87□□□□□ -2.55
DFFAO00273 SNORD63B-201ENST00000411005 70 ntBASIC-0.87□□□□□ -2.55
DFFAO00273 MTND3P22-201ENST00000510932 243 ntBASIC-0.87□□□□□ -2.55
DFFAO00273 RNU2-35P-201ENST00000516446 142 ntBASIC-0.87□□□□□ -2.55
DFFAO00273 U2.14-201ENST00000615943 113 ntBASIC-0.87□□□□□ -2.55
DFFAO00273 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.88□□□□□ -2.55
DFFAO00273 RNU6-690P-201ENST00000365242 106 ntBASIC-0.88□□□□□ -2.55
DFFAO00273 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.88□□□□□ -2.55
DFFAO00273 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.88□□□□□ -2.55
DFFAO00273 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.88□□□□□ -2.55
DFFAO00273 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.88□□□□□ -2.55
DFFAO00273 MIR206-201ENST00000384872 86 ntBASIC-0.88□□□□□ -2.55
DFFAO00273 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.88□□□□□ -2.55
DFFAO00273 RNA5SP66-201ENST00000517178 101 ntBASIC-0.88□□□□□ -2.55
DFFAO00273 AC113195.1-201ENST00000579952 141 ntBASIC-0.88□□□□□ -2.55
DFFAO00273 MIR4744-201ENST00000581563 82 ntBASIC-0.88□□□□□ -2.55
DFFAO00273 MIR4282-201ENST00000583613 67 ntBASIC-0.88□□□□□ -2.55
DFFAO00273 MIR4436A-201ENST00000585278 85 ntBASIC-0.88□□□□□ -2.55
DFFAO00273 AL391099.1-201ENST00000624635 187 ntBASIC-0.88□□□□□ -2.55
DFFAO00273 RNU6-170P-201ENST00000362832 104 ntBASIC-0.89□□□□□ -2.55
DFFAO00273 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.89□□□□□ -2.55
DFFAO00273 SNORD114-29-201ENST00000364819 70 ntBASIC-0.89□□□□□ -2.55
DFFAO00273 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.89□□□□□ -2.55
DFFAO00273 RNU6-524P-201ENST00000384270 107 ntBASIC-0.89□□□□□ -2.55
DFFAO00273 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.89□□□□□ -2.55
DFFAO00273 RNA5SP236-201ENST00000516169 116 ntBASIC-0.89□□□□□ -2.55
DFFAO00273 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.89□□□□□ -2.55
DFFAO00273 YWHAEP2-201ENST00000580066 112 ntBASIC-0.89□□□□□ -2.55
DFFAO00273 AC108676.2-201ENST00000605225 163 ntBASIC-0.89□□□□□ -2.55
DFFAO00273 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.9□□□□□ -2.55
DFFAO00273 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.9□□□□□ -2.55
DFFAO00273 MIR519E-201ENST00000385075 84 ntBASIC-0.9□□□□□ -2.55
DFFAO00273 AC093423.1-201ENST00000440817 142 ntBASIC-0.9□□□□□ -2.55
DFFAO00273 RNA5SP169-201ENST00000517268 117 ntBASIC-0.9□□□□□ -2.55
DFFAO00273 RNU6-988P-201ENST00000519081 107 ntBASIC-0.9□□□□□ -2.55
DFFAO00273 AP001362.1-201ENST00000625165 124 ntBASIC-0.9□□□□□ -2.55
DFFAO00273 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.91□□□□□ -2.56
DFFAO00273 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.91□□□□□ -2.56
DFFAO00273 MIR617-201ENST00000385030 97 ntBASIC-0.91□□□□□ -2.56
DFFAO00273 RNU4-69P-201ENST00000410677 143 ntBASIC-0.91□□□□□ -2.56
DFFAO00273 MIR548AG2-201ENST00000581228 64 ntBASIC-0.91□□□□□ -2.56
DFFAO00273 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.92□□□□□ -2.56
DFFAO00273 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.92□□□□□ -2.56
DFFAO00273 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.92□□□□□ -2.56
DFFAO00273 RNU6-455P-201ENST00000384681 107 ntBASIC-0.92□□□□□ -2.56
DFFAO00273 RNU6-578P-201ENST00000390980 103 ntBASIC-0.92□□□□□ -2.56
DFFAO00273 AC074198.2-201ENST00000508153 258 ntBASIC-0.92□□□□□ -2.56
DFFAO00273 RNU6-175P-201ENST00000516896 107 ntBASIC-0.92□□□□□ -2.56
DFFAO00273 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.92□□□□□ -2.56
DFFAO00273 AC011603.4-201ENST00000611325 277 ntBASIC-0.92□□□□□ -2.56
DFFAO00273 SNORD115-44-201ENST00000365391 82 ntBASIC-0.93□□□□□ -2.56
DFFAO00273 MIR539-201ENST00000365690 78 ntBASIC-0.93□□□□□ -2.56
DFFAO00273 RNU6-47P-201ENST00000383866 107 ntBASIC-0.93□□□□□ -2.56
DFFAO00273 RNU6-643P-201ENST00000384018 107 ntBASIC-0.93□□□□□ -2.56
DFFAO00273 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.93□□□□□ -2.56
DFFAO00273 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.93□□□□□ -2.56
DFFAO00273 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.93□□□□□ -2.56
DFFAO00273 SNORD114-14-201ENST00000362723 75 ntBASIC-0.94□□□□□ -2.56
DFFAO00273 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.94□□□□□ -2.56
DFFAO00273 RNU4-84P-201ENST00000364200 139 ntBASIC-0.94□□□□□ -2.56
DFFAO00273 RNA5SP368-201ENST00000364298 116 ntBASIC-0.94□□□□□ -2.56
DFFAO00273 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.94□□□□□ -2.56
DFFAO00273 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.94□□□□□ -2.56
DFFAO00273 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.94□□□□□ -2.56
DFFAO00273 MIR548AE1-201ENST00000583292 70 ntBASIC-0.94□□□□□ -2.56
DFFAO00273 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.95□□□□□ -2.56
DFFAO00273 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.95□□□□□ -2.56
DFFAO00273 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.95□□□□□ -2.56
DFFAO00273 RNU6-571P-201ENST00000384128 107 ntBASIC-0.95□□□□□ -2.56
DFFAO00273 RNU6-154P-201ENST00000384306 106 ntBASIC-0.95□□□□□ -2.56
DFFAO00273 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.95□□□□□ -2.56
DFFAO00273 MT-TQ-201ENST00000387372 72 ntBASIC-0.95□□□□□ -2.56
DFFAO00273 SNORA3B-201ENST00000391305 131 ntBASIC-0.95□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms