Protein–RNA interactions for Protein: E9PKD4

NPIPA5, Nuclear pore complex-interacting protein family member A5, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA5E9PKD4 MIR3658-201ENST00000636291 56 ntBASIC0.14□□□□□ -2.39
NPIPA5E9PKD4 Y_RNA.49-201ENST00000362714 112 ntBASIC0.13□□□□□ -2.39
NPIPA5E9PKD4 Y_RNA.119-201ENST00000363301 96 ntBASIC0.13□□□□□ -2.39
NPIPA5E9PKD4 Y_RNA.357-201ENST00000365487 109 ntBASIC0.13□□□□□ -2.39
NPIPA5E9PKD4 Y_RNA.366-201ENST00000365540 102 ntBASIC0.13□□□□□ -2.39
NPIPA5E9PKD4 SNORD37.2-201ENST00000391075 66 ntBASIC0.13□□□□□ -2.39
NPIPA5E9PKD4 SNORA75.5-201ENST00000391291 81 ntBASIC0.13□□□□□ -2.39
NPIPA5E9PKD4 RNU7-164P-201ENST00000459221 62 ntBASIC0.13□□□□□ -2.39
NPIPA5E9PKD4 RNU6-863P-201ENST00000515989 104 ntBASIC0.13□□□□□ -2.39
NPIPA5E9PKD4 RNU2-60P-201ENST00000517290 128 ntBASIC0.13□□□□□ -2.39
NPIPA5E9PKD4 MIR4639-201ENST00000584938 69 ntBASIC0.13□□□□□ -2.39
NPIPA5E9PKD4 MIR6755-201ENST00000619993 66 ntBASIC0.13□□□□□ -2.39
NPIPA5E9PKD4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.13□□□□□ -2.39
NPIPA5E9PKD4 Y_RNA.476-201ENST00000384347 108 ntBASIC0.12□□□□□ -2.39
NPIPA5E9PKD4 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
NPIPA5E9PKD4 RNU6-135P-201ENST00000516769 101 ntBASIC0.12□□□□□ -2.39
NPIPA5E9PKD4 TUG1_4.1-201ENST00000619464 181 ntBASIC0.12□□□□□ -2.39
NPIPA5E9PKD4 MIR6828-201ENST00000636181 60 ntBASIC0.12□□□□□ -2.39
NPIPA5E9PKD4 AC091304.10-201ENST00000641554 121 ntBASIC0.12□□□□□ -2.39
NPIPA5E9PKD4 RNU6-309P-201ENST00000364573 106 ntBASIC0.11□□□□□ -2.39
NPIPA5E9PKD4 RNU6-463P-201ENST00000384340 107 ntBASIC0.11□□□□□ -2.39
NPIPA5E9PKD4 MIRLET7F2-201ENST00000385277 83 ntBASIC0.11□□□□□ -2.39
NPIPA5E9PKD4 MTATP6P21-201ENST00000440681 189 ntBASIC0.11□□□□□ -2.39
NPIPA5E9PKD4 RNU5E-3P-201ENST00000515913 68 ntBASIC0.11□□□□□ -2.39
NPIPA5E9PKD4 RNU7-129P-201ENST00000516128 62 ntBASIC0.11□□□□□ -2.39
NPIPA5E9PKD4 MIR4752-201ENST00000579672 72 ntBASIC0.11□□□□□ -2.39
NPIPA5E9PKD4 RNU6-1099P-201ENST00000363533 107 ntBASIC0.1□□□□□ -2.39
NPIPA5E9PKD4 Y_RNA.297-201ENST00000364950 91 ntBASIC0.1□□□□□ -2.39
NPIPA5E9PKD4 SNORD18B-201ENST00000365659 72 ntBASIC0.1□□□□□ -2.39
NPIPA5E9PKD4 PCNPP3-201ENST00000393579 471 ntBASIC0.1□□□□□ -2.39
NPIPA5E9PKD4 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
NPIPA5E9PKD4 MIR1270-201ENST00000459320 83 ntBASIC0.1□□□□□ -2.39
NPIPA5E9PKD4 RNU7-123P-201ENST00000515911 60 ntBASIC0.1□□□□□ -2.39
NPIPA5E9PKD4 Y_RNA.681-201ENST00000516445 113 ntBASIC0.1□□□□□ -2.39
NPIPA5E9PKD4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.1□□□□□ -2.39
NPIPA5E9PKD4 AL353621.2-201ENST00000605340 133 ntBASIC0.1□□□□□ -2.39
NPIPA5E9PKD4 AC011603.4-201ENST00000611325 277 ntBASIC0.1□□□□□ -2.39
NPIPA5E9PKD4 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
NPIPA5E9PKD4 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
NPIPA5E9PKD4 SNORD114-10-201ENST00000363409 72 ntBASIC0.09□□□□□ -2.4
NPIPA5E9PKD4 Y_RNA.144-201ENST00000363521 113 ntBASIC0.09□□□□□ -2.4
NPIPA5E9PKD4 SNORD115-24-201ENST00000363528 82 ntBASIC0.09□□□□□ -2.4
NPIPA5E9PKD4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.09□□□□□ -2.4
NPIPA5E9PKD4 RNY1P2-201ENST00000364820 117 ntBASIC0.09□□□□□ -2.4
NPIPA5E9PKD4 Y_RNA.489-201ENST00000384410 101 ntBASIC0.09□□□□□ -2.4
NPIPA5E9PKD4 RNU6-239P-201ENST00000390990 99 ntBASIC0.09□□□□□ -2.4
NPIPA5E9PKD4 Y_RNA.644-201ENST00000459006 113 ntBASIC0.09□□□□□ -2.4
NPIPA5E9PKD4 Y_RNA.674-201ENST00000516362 113 ntBASIC0.09□□□□□ -2.4
NPIPA5E9PKD4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.09□□□□□ -2.4
NPIPA5E9PKD4 Y_RNA.584-201ENST00000391090 114 ntBASIC0.08□□□□□ -2.4
NPIPA5E9PKD4 Y_RNA.651-201ENST00000459380 103 ntBASIC0.08□□□□□ -2.4
NPIPA5E9PKD4 Y_RNA.686-201ENST00000516548 134 ntBASIC0.08□□□□□ -2.4
NPIPA5E9PKD4 AP002392.1-201ENST00000537692 208 ntBASIC0.08□□□□□ -2.4
NPIPA5E9PKD4 MIR4500-201ENST00000579472 76 ntBASIC0.08□□□□□ -2.4
NPIPA5E9PKD4 SNORA9.1-201ENST00000362412 131 ntBASIC0.07□□□□□ -2.4
NPIPA5E9PKD4 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
NPIPA5E9PKD4 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
NPIPA5E9PKD4 RNU4-84P-201ENST00000364200 139 ntBASIC0.07□□□□□ -2.4
NPIPA5E9PKD4 MIR760-201ENST00000390220 80 ntBASIC0.07□□□□□ -2.4
NPIPA5E9PKD4 RNU4-69P-201ENST00000410677 143 ntBASIC0.07□□□□□ -2.4
NPIPA5E9PKD4 Y_RNA.690-201ENST00000516603 95 ntBASIC0.07□□□□□ -2.4
NPIPA5E9PKD4 MIR3646-201ENST00000578301 84 ntBASIC0.07□□□□□ -2.4
NPIPA5E9PKD4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.07□□□□□ -2.4
NPIPA5E9PKD4 AC072026.1-201ENST00000605023 201 ntBASIC0.07□□□□□ -2.4
NPIPA5E9PKD4 AC141273.2-201ENST00000618989 130 ntBASIC0.07□□□□□ -2.4
NPIPA5E9PKD4 Y_RNA.56-201ENST00000362798 112 ntBASIC0.06□□□□□ -2.4
NPIPA5E9PKD4 Y_RNA.68-201ENST00000362881 102 ntBASIC0.06□□□□□ -2.4
NPIPA5E9PKD4 Y_RNA.298-201ENST00000364960 107 ntBASIC0.06□□□□□ -2.4
NPIPA5E9PKD4 RNU6-1321P-201ENST00000390905 107 ntBASIC0.06□□□□□ -2.4
NPIPA5E9PKD4 MIR548L-201ENST00000408303 86 ntBASIC0.06□□□□□ -2.4
NPIPA5E9PKD4 RNU6-861P-201ENST00000516745 106 ntBASIC0.06□□□□□ -2.4
NPIPA5E9PKD4 RNU6-1271P-201ENST00000517049 105 ntBASIC0.06□□□□□ -2.4
NPIPA5E9PKD4 MIR5190-201ENST00000581537 80 ntBASIC0.06□□□□□ -2.4
NPIPA5E9PKD4 MIR4719-201ENST00000585233 84 ntBASIC0.06□□□□□ -2.4
NPIPA5E9PKD4 AC098479.1-201ENST00000609225 154 ntBASIC0.06□□□□□ -2.4
NPIPA5E9PKD4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.05□□□□□ -2.4
NPIPA5E9PKD4 MIR643-201ENST00000385267 97 ntBASIC0.05□□□□□ -2.4
NPIPA5E9PKD4 AC108059.2-201ENST00000434626 151 ntBASIC0.05□□□□□ -2.4
NPIPA5E9PKD4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.05□□□□□ -2.4
NPIPA5E9PKD4 DNAJC19P2-201ENST00000593340 302 ntBASIC0.05□□□□□ -2.4
NPIPA5E9PKD4 AC104408.1-201ENST00000605241 170 ntBASIC0.05□□□□□ -2.4
NPIPA5E9PKD4 AC067863.3-201ENST00000624172 122 ntBASIC0.05□□□□□ -2.4
NPIPA5E9PKD4 MIR499B-201ENST00000636498 73 ntBASIC0.05□□□□□ -2.4
NPIPA5E9PKD4 Y_RNA.188-201ENST00000363952 111 ntBASIC0.04□□□□□ -2.4
NPIPA5E9PKD4 Y_RNA.448-201ENST00000384185 108 ntBASIC0.04□□□□□ -2.4
NPIPA5E9PKD4 RNU6-1104P-201ENST00000384723 104 ntBASIC0.04□□□□□ -2.4
NPIPA5E9PKD4 RNU7-121P-201ENST00000516604 62 ntBASIC0.04□□□□□ -2.4
NPIPA5E9PKD4 RNU6-388P-201ENST00000517012 105 ntBASIC0.04□□□□□ -2.4
NPIPA5E9PKD4 RNU6-389P-201ENST00000517048 105 ntBASIC0.04□□□□□ -2.4
NPIPA5E9PKD4 AC138869.1-201ENST00000568623 124 ntBASIC0.04□□□□□ -2.4
NPIPA5E9PKD4 RNU6-379P-201ENST00000363813 104 ntBASIC0.03□□□□□ -2.4
NPIPA5E9PKD4 Y_RNA.299-201ENST00000364973 94 ntBASIC0.03□□□□□ -2.4
NPIPA5E9PKD4 RNU6-429P-201ENST00000384582 108 ntBASIC0.03□□□□□ -2.4
NPIPA5E9PKD4 MIR206-201ENST00000384872 86 ntBASIC0.03□□□□□ -2.4
NPIPA5E9PKD4 RNU7-104P-201ENST00000459398 79 ntBASIC0.03□□□□□ -2.4
NPIPA5E9PKD4 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.03□□□□□ -2.4
NPIPA5E9PKD4 AC108081.1-201ENST00000604358 221 ntBASIC0.03□□□□□ -2.4
NPIPA5E9PKD4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.02□□□□□ -2.41
NPIPA5E9PKD4 SNORD114-9-201ENST00000364370 72 ntBASIC0.02□□□□□ -2.41
NPIPA5E9PKD4 RNU6-1318P-201ENST00000365389 103 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 310.7 ms