Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 Y_RNA.400-201ENST00000383963 111 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-616P-201ENST00000384353 107 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 Y_RNA.555-201ENST00000384673 110 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 SNORD100-201ENST00000408573 76 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 MIR548I1-201ENST00000408810 149 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-447P-201ENST00000410293 104 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-1118P-201ENST00000410382 104 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-1076P-201ENST00000410397 104 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-355P-201ENST00000410427 104 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-791P-201ENST00000410467 104 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 RNA5SP261-201ENST00000410536 106 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-705P-201ENST00000410601 104 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-1100P-201ENST00000410691 104 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-860P-201ENST00000410860 104 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-1217P-201ENST00000411276 104 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-785P-201ENST00000411324 104 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 Y_RNA.630-201ENST00000411370 108 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 RPL39P25-201ENST00000449384 154 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-448P-201ENST00000517052 107 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 MIR548X2-201ENST00000579776 100 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 AC098479.1-201ENST00000609225 154 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 U6.90-201ENST00000614007 104 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 U6.70-201ENST00000620287 104 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 AC243829.3-201ENST00000622177 108 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 MIR1255B1-201ENST00000636325 63 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 Y_RNA.180-201ENST00000363867 113 ntBASIC0.4□□□□□ -2.35
TRIM49D1C9J1S8 MIR206-201ENST00000384872 86 ntBASIC0.4□□□□□ -2.35
TRIM49D1C9J1S8 MIR216A-201ENST00000385063 110 ntBASIC0.4□□□□□ -2.35
TRIM49D1C9J1S8 RNU6-257P-201ENST00000410238 98 ntBASIC0.4□□□□□ -2.35
TRIM49D1C9J1S8 MTND4LP9-201ENST00000427694 174 ntBASIC0.4□□□□□ -2.35
TRIM49D1C9J1S8 RNA5SP94-201ENST00000516917 108 ntBASIC0.4□□□□□ -2.35
TRIM49D1C9J1S8 AC018659.1-201ENST00000551083 169 ntBASIC0.4□□□□□ -2.35
TRIM49D1C9J1S8 MIR3678-201ENST00000578455 94 ntBASIC0.4□□□□□ -2.35
TRIM49D1C9J1S8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.4□□□□□ -2.35
TRIM49D1C9J1S8 uc_338.16-201ENST00000621804 95 ntBASIC0.4□□□□□ -2.35
TRIM49D1C9J1S8 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.4□□□□□ -2.35
TRIM49D1C9J1S8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.4□□□□□ -2.35
TRIM49D1C9J1S8 RNU6-209P-201ENST00000384118 107 ntBASIC0.39□□□□□ -2.35
TRIM49D1C9J1S8 RNU6-187P-201ENST00000384139 106 ntBASIC0.39□□□□□ -2.35
TRIM49D1C9J1S8 Y_RNA.448-201ENST00000384185 108 ntBASIC0.39□□□□□ -2.35
TRIM49D1C9J1S8 MIR1263-201ENST00000408324 86 ntBASIC0.39□□□□□ -2.35
TRIM49D1C9J1S8 RNU7-107P-201ENST00000459121 61 ntBASIC0.39□□□□□ -2.35
TRIM49D1C9J1S8 RN7SL793P-201ENST00000583259 296 ntBASIC0.39□□□□□ -2.35
TRIM49D1C9J1S8 AC011603.4-201ENST00000611325 277 ntBASIC0.39□□□□□ -2.35
TRIM49D1C9J1S8 AC087741.2-201ENST00000619415 172 ntBASIC0.39□□□□□ -2.35
TRIM49D1C9J1S8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
TRIM49D1C9J1S8 MIR103A1-201ENST00000362165 78 ntBASIC0.38□□□□□ -2.35
TRIM49D1C9J1S8 Y_RNA.567-201ENST00000384736 106 ntBASIC0.38□□□□□ -2.35
TRIM49D1C9J1S8 MIR513C-201ENST00000401352 84 ntBASIC0.38□□□□□ -2.35
TRIM49D1C9J1S8 MTATP6P21-201ENST00000440681 189 ntBASIC0.38□□□□□ -2.35
TRIM49D1C9J1S8 RNA5SP480-201ENST00000516840 109 ntBASIC0.38□□□□□ -2.35
TRIM49D1C9J1S8 RNU6-1234P-201ENST00000516877 103 ntBASIC0.38□□□□□ -2.35
TRIM49D1C9J1S8 AP001328.1-201ENST00000528550 176 ntBASIC0.38□□□□□ -2.35
TRIM49D1C9J1S8 Y_RNA.119-201ENST00000363301 96 ntBASIC0.37□□□□□ -2.35
TRIM49D1C9J1S8 SNORD18B-201ENST00000365659 72 ntBASIC0.37□□□□□ -2.35
TRIM49D1C9J1S8 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
TRIM49D1C9J1S8 Y_RNA.488-201ENST00000384403 102 ntBASIC0.37□□□□□ -2.35
TRIM49D1C9J1S8 RNU6-535P-201ENST00000384722 107 ntBASIC0.37□□□□□ -2.35
TRIM49D1C9J1S8 RNU4-69P-201ENST00000410677 143 ntBASIC0.37□□□□□ -2.35
TRIM49D1C9J1S8 BX276092.1-201ENST00000427368 251 ntBASIC0.37□□□□□ -2.35
TRIM49D1C9J1S8 SUMO1P3-201ENST00000439961 304 ntBASIC0.37□□□□□ -2.35
TRIM49D1C9J1S8 AL353813.1-201ENST00000440700 253 ntBASIC0.37□□□□□ -2.35
TRIM49D1C9J1S8 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.37□□□□□ -2.35
TRIM49D1C9J1S8 RN7SKP19-201ENST00000516016 252 ntBASIC0.37□□□□□ -2.35
TRIM49D1C9J1S8 Y_RNA.697-201ENST00000516776 113 ntBASIC0.37□□□□□ -2.35
TRIM49D1C9J1S8 DEFB131E-201ENST00000532329 154 ntBASIC0.37□□□□□ -2.35
TRIM49D1C9J1S8 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.37□□□□□ -2.35
TRIM49D1C9J1S8 Y_RNA.536-201ENST00000384621 113 ntBASIC0.36□□□□□ -2.35
TRIM49D1C9J1S8 RNU6-1194P-201ENST00000516208 104 ntBASIC0.36□□□□□ -2.35
TRIM49D1C9J1S8 RNU7-6P-201ENST00000516845 62 ntBASIC0.36□□□□□ -2.35
TRIM49D1C9J1S8 RNU6-971P-201ENST00000516920 106 ntBASIC0.36□□□□□ -2.35
TRIM49D1C9J1S8 RNU6-1212P-201ENST00000517023 104 ntBASIC0.36□□□□□ -2.35
TRIM49D1C9J1S8 MIR3133-201ENST00000583157 78 ntBASIC0.36□□□□□ -2.35
TRIM49D1C9J1S8 MIR376B-201ENST00000614515 100 ntBASIC0.36□□□□□ -2.35
TRIM49D1C9J1S8 MIR5087-201ENST00000635826 76 ntBASIC0.36□□□□□ -2.35
TRIM49D1C9J1S8 SNORD114-23-201ENST00000363536 72 ntBASIC0.35□□□□□ -2.35
TRIM49D1C9J1S8 SNORD114-26-201ENST00000363543 72 ntBASIC0.35□□□□□ -2.35
TRIM49D1C9J1S8 RNY1P4-201ENST00000384595 115 ntBASIC0.35□□□□□ -2.35
TRIM49D1C9J1S8 Y_RNA.568-201ENST00000384742 113 ntBASIC0.35□□□□□ -2.35
TRIM49D1C9J1S8 MIR34C-201ENST00000384831 77 ntBASIC0.35□□□□□ -2.35
TRIM49D1C9J1S8 AL158147.1-201ENST00000443970 75 ntBASIC0.35□□□□□ -2.35
TRIM49D1C9J1S8 MIR4752-201ENST00000579672 72 ntBASIC0.35□□□□□ -2.35
TRIM49D1C9J1S8 MIR3668-201ENST00000582138 75 ntBASIC0.35□□□□□ -2.35
TRIM49D1C9J1S8 MIR7107-201ENST00000611489 80 ntBASIC0.35□□□□□ -2.35
TRIM49D1C9J1S8 AC243829.6-201ENST00000612652 106 ntBASIC0.35□□□□□ -2.35
TRIM49D1C9J1S8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
TRIM49D1C9J1S8 Y_RNA.36-201ENST00000362602 112 ntBASIC0.34□□□□□ -2.36
TRIM49D1C9J1S8 Y_RNA.247-201ENST00000364500 92 ntBASIC0.34□□□□□ -2.36
TRIM49D1C9J1S8 Y_RNA.344-201ENST00000365381 112 ntBASIC0.34□□□□□ -2.36
TRIM49D1C9J1S8 Y_RNA.464-201ENST00000384282 110 ntBASIC0.34□□□□□ -2.36
TRIM49D1C9J1S8 SNORA8.2-201ENST00000384372 139 ntBASIC0.34□□□□□ -2.36
TRIM49D1C9J1S8 RNU6-772P-201ENST00000516042 105 ntBASIC0.34□□□□□ -2.36
TRIM49D1C9J1S8 Y_RNA.692-201ENST00000516627 105 ntBASIC0.34□□□□□ -2.36
TRIM49D1C9J1S8 AC092634.7-201ENST00000621022 103 ntBASIC0.34□□□□□ -2.36
TRIM49D1C9J1S8 AP001340.1-201ENST00000624405 217 ntBASIC0.34□□□□□ -2.36
TRIM49D1C9J1S8 Y_RNA.218-201ENST00000364218 104 ntBASIC0.33□□□□□ -2.36
TRIM49D1C9J1S8 RNA5SP117-201ENST00000365294 118 ntBASIC0.33□□□□□ -2.36
TRIM49D1C9J1S8 Y_RNA.466-201ENST00000384294 113 ntBASIC0.33□□□□□ -2.36
TRIM49D1C9J1S8 RNU6-1211P-201ENST00000459179 105 ntBASIC0.33□□□□□ -2.36
TRIM49D1C9J1S8 TRAJ51-201ENST00000504127 63 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms