Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC092628.1-201ENST00000436250 252 ntBASIC0.37□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RN7SKP19-201ENST00000516016 252 ntBASIC0.37□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNU6-229P-201ENST00000516614 102 ntBASIC0.37□□□□□ -2.35
TRBV4-1A0A0J9YWV2 Y_RNA.56-201ENST00000362798 112 ntBASIC0.36□□□□□ -2.35
TRBV4-1A0A0J9YWV2 Y_RNA.294-201ENST00000364916 102 ntBASIC0.36□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNU6-429P-201ENST00000384582 108 ntBASIC0.36□□□□□ -2.35
TRBV4-1A0A0J9YWV2 MIRLET7F2-201ENST00000385277 83 ntBASIC0.36□□□□□ -2.35
TRBV4-1A0A0J9YWV2 MT-TI-201ENST00000387365 69 ntBASIC0.36□□□□□ -2.35
TRBV4-1A0A0J9YWV2 MIR1276-201ENST00000408707 83 ntBASIC0.36□□□□□ -2.35
TRBV4-1A0A0J9YWV2 AL158147.1-201ENST00000443970 75 ntBASIC0.36□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNU6-426P-201ENST00000516464 97 ntBASIC0.36□□□□□ -2.35
TRBV4-1A0A0J9YWV2 MIR6828-201ENST00000636181 60 ntBASIC0.36□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNA5SP245-201ENST00000364239 121 ntBASIC0.35□□□□□ -2.35
TRBV4-1A0A0J9YWV2 Y_RNA.448-201ENST00000384185 108 ntBASIC0.35□□□□□ -2.35
TRBV4-1A0A0J9YWV2 SNORD28-201ENST00000384706 75 ntBASIC0.35□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNU6-1307P-201ENST00000391012 103 ntBASIC0.35□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNA5SP136-201ENST00000410906 107 ntBASIC0.35□□□□□ -2.35
TRBV4-1A0A0J9YWV2 SNORD71-201ENST00000411292 86 ntBASIC0.35□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNU7-48P-201ENST00000458875 63 ntBASIC0.35□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNU6-237P-201ENST00000515985 71 ntBASIC0.35□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNU7-2P-201ENST00000516096 62 ntBASIC0.35□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNU6-255P-201ENST00000516957 105 ntBASIC0.35□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNA5SP47-201ENST00000517230 109 ntBASIC0.35□□□□□ -2.35
TRBV4-1A0A0J9YWV2 MIR4639-201ENST00000584938 69 ntBASIC0.35□□□□□ -2.35
TRBV4-1A0A0J9YWV2 AC087741.2-201ENST00000619415 172 ntBASIC0.35□□□□□ -2.35
TRBV4-1A0A0J9YWV2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
TRBV4-1A0A0J9YWV2 MIR101-2-201ENST00000362195 79 ntBASIC0.34□□□□□ -2.36
TRBV4-1A0A0J9YWV2 SNORD115-19-201ENST00000363098 82 ntBASIC0.34□□□□□ -2.36
TRBV4-1A0A0J9YWV2 Y_RNA.98-201ENST00000363109 102 ntBASIC0.34□□□□□ -2.36
TRBV4-1A0A0J9YWV2 SNORD44.1-201ENST00000363202 61 ntBASIC0.34□□□□□ -2.36
TRBV4-1A0A0J9YWV2 SNORD115-18-201ENST00000363293 82 ntBASIC0.34□□□□□ -2.36
TRBV4-1A0A0J9YWV2 Y_RNA.198-201ENST00000364013 98 ntBASIC0.34□□□□□ -2.36
TRBV4-1A0A0J9YWV2 SNORD115-17-201ENST00000364612 82 ntBASIC0.34□□□□□ -2.36
TRBV4-1A0A0J9YWV2 SNORD115-35-201ENST00000365122 82 ntBASIC0.34□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNY1P5-201ENST00000383890 115 ntBASIC0.34□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNU6-616P-201ENST00000384353 107 ntBASIC0.34□□□□□ -2.36
TRBV4-1A0A0J9YWV2 MIR216A-201ENST00000385063 110 ntBASIC0.34□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNU6-907P-201ENST00000390924 102 ntBASIC0.34□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNA5SP272-201ENST00000516095 111 ntBASIC0.34□□□□□ -2.36
TRBV4-1A0A0J9YWV2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.34□□□□□ -2.36
TRBV4-1A0A0J9YWV2 MIR3163-201ENST00000581592 73 ntBASIC0.34□□□□□ -2.36
TRBV4-1A0A0J9YWV2 SNORA25.18-201ENST00000607153 114 ntBASIC0.34□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNA5SP347-201ENST00000362445 119 ntBASIC0.33□□□□□ -2.36
TRBV4-1A0A0J9YWV2 SNORA63.5-201ENST00000363548 123 ntBASIC0.33□□□□□ -2.36
TRBV4-1A0A0J9YWV2 Y_RNA.506-201ENST00000384494 102 ntBASIC0.33□□□□□ -2.36
TRBV4-1A0A0J9YWV2 MIR548I1-201ENST00000408810 149 ntBASIC0.33□□□□□ -2.36
TRBV4-1A0A0J9YWV2 AC244505.6-201ENST00000452829 130 ntBASIC0.33□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNA5SP268-201ENST00000516828 124 ntBASIC0.33□□□□□ -2.36
TRBV4-1A0A0J9YWV2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.33□□□□□ -2.36
TRBV4-1A0A0J9YWV2 MIR3668-201ENST00000582138 75 ntBASIC0.33□□□□□ -2.36
TRBV4-1A0A0J9YWV2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
TRBV4-1A0A0J9YWV2 AC090625.1-201ENST00000357130 210 ntBASIC0.32□□□□□ -2.36
TRBV4-1A0A0J9YWV2 Y_RNA.127-201ENST00000363386 109 ntBASIC0.32□□□□□ -2.36
TRBV4-1A0A0J9YWV2 Y_RNA.328-201ENST00000365208 113 ntBASIC0.32□□□□□ -2.36
TRBV4-1A0A0J9YWV2 MTND4LP9-201ENST00000427694 174 ntBASIC0.32□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNU7-6P-201ENST00000516845 62 ntBASIC0.32□□□□□ -2.36
TRBV4-1A0A0J9YWV2 MIR548H5-201ENST00000580314 60 ntBASIC0.32□□□□□ -2.36
TRBV4-1A0A0J9YWV2 TUG1_4.1-201ENST00000619464 181 ntBASIC0.32□□□□□ -2.36
TRBV4-1A0A0J9YWV2 AP001362.1-201ENST00000625165 124 ntBASIC0.32□□□□□ -2.36
TRBV4-1A0A0J9YWV2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.32□□□□□ -2.36
TRBV4-1A0A0J9YWV2 Y_RNA.213-201ENST00000364178 111 ntBASIC0.31□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNU6-1229P-201ENST00000364295 107 ntBASIC0.31□□□□□ -2.36
TRBV4-1A0A0J9YWV2 Y_RNA.568-201ENST00000384742 113 ntBASIC0.31□□□□□ -2.36
TRBV4-1A0A0J9YWV2 SUMO1P3-201ENST00000439961 304 ntBASIC0.31□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNU6-863P-201ENST00000515989 104 ntBASIC0.31□□□□□ -2.36
TRBV4-1A0A0J9YWV2 MIR7107-201ENST00000611489 80 ntBASIC0.31□□□□□ -2.36
TRBV4-1A0A0J9YWV2 AC244669.1-204ENST00000621564 178 ntBASIC0.31□□□□□ -2.36
TRBV4-1A0A0J9YWV2 MIR103A1-201ENST00000362165 78 ntBASIC0.3□□□□□ -2.36
TRBV4-1A0A0J9YWV2 MIR337-201ENST00000362281 93 ntBASIC0.3□□□□□ -2.36
TRBV4-1A0A0J9YWV2 MIR1263-201ENST00000408324 86 ntBASIC0.3□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.3□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNU6-781P-201ENST00000516377 101 ntBASIC0.3□□□□□ -2.36
TRBV4-1A0A0J9YWV2 AC138869.1-201ENST00000568623 124 ntBASIC0.3□□□□□ -2.36
TRBV4-1A0A0J9YWV2 MIR4500-201ENST00000579472 76 ntBASIC0.3□□□□□ -2.36
TRBV4-1A0A0J9YWV2 Y_RNA.773-201ENST00000607168 90 ntBASIC0.3□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNU7-10P-201ENST00000607194 63 ntBASIC0.3□□□□□ -2.36
TRBV4-1A0A0J9YWV2 MIR376B-201ENST00000614515 100 ntBASIC0.3□□□□□ -2.36
TRBV4-1A0A0J9YWV2 AC091304.10-201ENST00000641554 121 ntBASIC0.3□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNU6-865P-201ENST00000364772 107 ntBASIC0.29□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNU6-1327P-201ENST00000365302 105 ntBASIC0.29□□□□□ -2.36
TRBV4-1A0A0J9YWV2 Y_RNA.343-201ENST00000365354 112 ntBASIC0.29□□□□□ -2.36
TRBV4-1A0A0J9YWV2 MIR548J-201ENST00000408833 112 ntBASIC0.29□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNU6-735P-201ENST00000410612 107 ntBASIC0.29□□□□□ -2.36
TRBV4-1A0A0J9YWV2 SNRPGP12-201ENST00000449481 213 ntBASIC0.29□□□□□ -2.36
TRBV4-1A0A0J9YWV2 AC108740.1-201ENST00000498629 225 ntBASIC0.29□□□□□ -2.36
TRBV4-1A0A0J9YWV2 MIR5087-201ENST00000635826 76 ntBASIC0.29□□□□□ -2.36
TRBV4-1A0A0J9YWV2 SNORA50A-201ENST00000384225 134 ntBASIC0.28□□□□□ -2.36
TRBV4-1A0A0J9YWV2 Y_RNA.528-201ENST00000384575 108 ntBASIC0.28□□□□□ -2.36
TRBV4-1A0A0J9YWV2 SNORA40-201ENST00000388090 126 ntBASIC0.28□□□□□ -2.36
TRBV4-1A0A0J9YWV2 MIR759-201ENST00000390224 91 ntBASIC0.28□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNU6-257P-201ENST00000410238 98 ntBASIC0.28□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNU2-59P-201ENST00000410482 191 ntBASIC0.28□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNA5SP227-201ENST00000516184 113 ntBASIC0.28□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNU6-1234P-201ENST00000516877 103 ntBASIC0.28□□□□□ -2.36
TRBV4-1A0A0J9YWV2 MIR6788-201ENST00000618842 66 ntBASIC0.28□□□□□ -2.36
TRBV4-1A0A0J9YWV2 RNU6-235P-201ENST00000362644 107 ntBASIC0.27□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU6-209P-201ENST00000384118 107 ntBASIC0.27□□□□□ -2.37
TRBV4-1A0A0J9YWV2 MIR548I2-201ENST00000408348 149 ntBASIC0.27□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU6-346P-201ENST00000516288 111 ntBASIC0.27□□□□□ -2.37
TRBV4-1A0A0J9YWV2 RNU6-521P-201ENST00000516663 105 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 230.6 ms