Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AL022718.1-201ENST00000412004 84 ntBASIC0.18□□□□□ -2.38
TRAV40A0A0B4J280 RNU7-164P-201ENST00000459221 62 ntBASIC0.18□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-1232P-201ENST00000516299 86 ntBASIC0.18□□□□□ -2.38
TRAV40A0A0B4J280 RNA5SP268-201ENST00000516828 124 ntBASIC0.18□□□□□ -2.38
TRAV40A0A0B4J280 AP003327.1-201ENST00000529684 127 ntBASIC0.18□□□□□ -2.38
TRAV40A0A0B4J280 DEFB131E-201ENST00000532329 154 ntBASIC0.18□□□□□ -2.38
TRAV40A0A0B4J280 AP002392.1-201ENST00000537692 208 ntBASIC0.18□□□□□ -2.38
TRAV40A0A0B4J280 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
TRAV40A0A0B4J280 AC021443.1-201ENST00000604478 211 ntBASIC0.18□□□□□ -2.38
TRAV40A0A0B4J280 Y_RNA.119-201ENST00000363301 96 ntBASIC0.17□□□□□ -2.38
TRAV40A0A0B4J280 RNA5SP62-201ENST00000363457 110 ntBASIC0.17□□□□□ -2.38
TRAV40A0A0B4J280 Y_RNA.357-201ENST00000365487 109 ntBASIC0.17□□□□□ -2.38
TRAV40A0A0B4J280 Y_RNA.489-201ENST00000384410 101 ntBASIC0.17□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-460P-201ENST00000391158 108 ntBASIC0.17□□□□□ -2.38
TRAV40A0A0B4J280 AL603914.1-201ENST00000401964 204 ntBASIC0.17□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-1135P-201ENST00000411083 103 ntBASIC0.17□□□□□ -2.38
TRAV40A0A0B4J280 RNU5E-3P-201ENST00000515913 68 ntBASIC0.17□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-1194P-201ENST00000516208 104 ntBASIC0.17□□□□□ -2.38
TRAV40A0A0B4J280 RNA5SP134-201ENST00000516492 96 ntBASIC0.17□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-765P-201ENST00000516916 99 ntBASIC0.17□□□□□ -2.38
TRAV40A0A0B4J280 RNA5SP47-201ENST00000517230 109 ntBASIC0.17□□□□□ -2.38
TRAV40A0A0B4J280 IGKV1-22-201ENST00000524313 326 ntBASIC0.17□□□□□ -2.38
TRAV40A0A0B4J280 AC138907.4-201ENST00000570107 226 ntBASIC0.17□□□□□ -2.38
TRAV40A0A0B4J280 Y_RNA.240-201ENST00000364469 95 ntBASIC0.16□□□□□ -2.38
TRAV40A0A0B4J280 Y_RNA.294-201ENST00000364916 102 ntBASIC0.16□□□□□ -2.38
TRAV40A0A0B4J280 SNORD28-201ENST00000384706 75 ntBASIC0.16□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-1321P-201ENST00000390905 107 ntBASIC0.16□□□□□ -2.38
TRAV40A0A0B4J280 SNORD37.2-201ENST00000391075 66 ntBASIC0.16□□□□□ -2.38
TRAV40A0A0B4J280 RNU7-197P-201ENST00000458836 62 ntBASIC0.16□□□□□ -2.38
TRAV40A0A0B4J280 Y_RNA.690-201ENST00000516603 95 ntBASIC0.16□□□□□ -2.38
TRAV40A0A0B4J280 AC072026.1-201ENST00000605023 201 ntBASIC0.16□□□□□ -2.38
TRAV40A0A0B4J280 AL109933.3-201ENST00000619095 188 ntBASIC0.16□□□□□ -2.38
TRAV40A0A0B4J280 AC244669.1-204ENST00000621564 178 ntBASIC0.16□□□□□ -2.38
TRAV40A0A0B4J280 MIR6828-201ENST00000636181 60 ntBASIC0.16□□□□□ -2.38
TRAV40A0A0B4J280 RNA5SP457-201ENST00000363657 124 ntBASIC0.15□□□□□ -2.39
TRAV40A0A0B4J280 RNU6-200P-201ENST00000364743 107 ntBASIC0.15□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.298-201ENST00000364960 107 ntBASIC0.15□□□□□ -2.39
TRAV40A0A0B4J280 RNU4-11P-201ENST00000365287 132 ntBASIC0.15□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.423-201ENST00000384057 113 ntBASIC0.15□□□□□ -2.39
TRAV40A0A0B4J280 SNORD71-201ENST00000411292 86 ntBASIC0.15□□□□□ -2.39
TRAV40A0A0B4J280 RNU6-469P-201ENST00000516253 101 ntBASIC0.15□□□□□ -2.39
TRAV40A0A0B4J280 DNAJC19P2-201ENST00000593340 302 ntBASIC0.15□□□□□ -2.39
TRAV40A0A0B4J280 RNU1-29P-201ENST00000606574 126 ntBASIC0.15□□□□□ -2.39
TRAV40A0A0B4J280 TUG1_4.1-201ENST00000619464 181 ntBASIC0.15□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.49-201ENST00000362714 112 ntBASIC0.14□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.85-201ENST00000363014 111 ntBASIC0.14□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.272-201ENST00000364696 102 ntBASIC0.14□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.515-201ENST00000384535 112 ntBASIC0.14□□□□□ -2.39
TRAV40A0A0B4J280 MIR206-201ENST00000384872 86 ntBASIC0.14□□□□□ -2.39
TRAV40A0A0B4J280 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.584-201ENST00000391090 114 ntBASIC0.14□□□□□ -2.39
TRAV40A0A0B4J280 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
TRAV40A0A0B4J280 AC073261.1-201ENST00000429409 121 ntBASIC0.14□□□□□ -2.39
TRAV40A0A0B4J280 RNU6-893P-201ENST00000458841 100 ntBASIC0.14□□□□□ -2.39
TRAV40A0A0B4J280 RNU7-120P-201ENST00000459334 63 ntBASIC0.14□□□□□ -2.39
TRAV40A0A0B4J280 RNA5SP272-201ENST00000516095 111 ntBASIC0.14□□□□□ -2.39
TRAV40A0A0B4J280 RNA5SP227-201ENST00000516184 113 ntBASIC0.14□□□□□ -2.39
TRAV40A0A0B4J280 RNY4P20-201ENST00000516678 93 ntBASIC0.14□□□□□ -2.39
TRAV40A0A0B4J280 SCARNA16.5-201ENST00000517114 183 ntBASIC0.14□□□□□ -2.39
TRAV40A0A0B4J280 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.14□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.174-201ENST00000363781 105 ntBASIC0.13□□□□□ -2.39
TRAV40A0A0B4J280 RNU6-151P-201ENST00000364158 107 ntBASIC0.13□□□□□ -2.39
TRAV40A0A0B4J280 RNU6-1327P-201ENST00000365302 105 ntBASIC0.13□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.441-201ENST00000384123 112 ntBASIC0.13□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.448-201ENST00000384185 108 ntBASIC0.13□□□□□ -2.39
TRAV40A0A0B4J280 RNU6-616P-201ENST00000384353 107 ntBASIC0.13□□□□□ -2.39
TRAV40A0A0B4J280 RNA5SP63-201ENST00000391225 112 ntBASIC0.13□□□□□ -2.39
TRAV40A0A0B4J280 PCNPP3-201ENST00000393579 471 ntBASIC0.13□□□□□ -2.39
TRAV40A0A0B4J280 RNU4-69P-201ENST00000410677 143 ntBASIC0.13□□□□□ -2.39
TRAV40A0A0B4J280 AC112693.2-201ENST00000556538 232 ntBASIC0.13□□□□□ -2.39
TRAV40A0A0B4J280 MIR3646-201ENST00000578301 84 ntBASIC0.13□□□□□ -2.39
TRAV40A0A0B4J280 AC004792.1-201ENST00000614523 137 ntBASIC0.13□□□□□ -2.39
TRAV40A0A0B4J280 RNU4-58P-201ENST00000363192 141 ntBASIC0.12□□□□□ -2.39
TRAV40A0A0B4J280 SNORD114-10-201ENST00000363409 72 ntBASIC0.12□□□□□ -2.39
TRAV40A0A0B4J280 RNU6-804P-201ENST00000384286 107 ntBASIC0.12□□□□□ -2.39
TRAV40A0A0B4J280 RNU2-59P-201ENST00000410482 191 ntBASIC0.12□□□□□ -2.39
TRAV40A0A0B4J280 BX276092.1-201ENST00000427368 251 ntBASIC0.12□□□□□ -2.39
TRAV40A0A0B4J280 TRAJ51-201ENST00000504127 63 ntBASIC0.12□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.662-201ENST00000516028 97 ntBASIC0.12□□□□□ -2.39
TRAV40A0A0B4J280 SNORA81.3-201ENST00000517283 198 ntBASIC0.12□□□□□ -2.39
TRAV40A0A0B4J280 RNU7-161P-201ENST00000517289 62 ntBASIC0.12□□□□□ -2.39
TRAV40A0A0B4J280 AC069113.3-201ENST00000521019 150 ntBASIC0.12□□□□□ -2.39
TRAV40A0A0B4J280 AC011603.4-201ENST00000611325 277 ntBASIC0.12□□□□□ -2.39
TRAV40A0A0B4J280 MIR6718-201ENST00000616153 80 ntBASIC0.12□□□□□ -2.39
TRAV40A0A0B4J280 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.12□□□□□ -2.39
TRAV40A0A0B4J280 AC090625.1-201ENST00000357130 210 ntBASIC0.11□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.8-201ENST00000362353 102 ntBASIC0.11□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.30-201ENST00000362572 97 ntBASIC0.11□□□□□ -2.39
TRAV40A0A0B4J280 SNORD115-24-201ENST00000363528 82 ntBASIC0.11□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.401-201ENST00000383965 117 ntBASIC0.11□□□□□ -2.39
TRAV40A0A0B4J280 RNU6-735P-201ENST00000410612 107 ntBASIC0.11□□□□□ -2.39
TRAV40A0A0B4J280 MIR4500-201ENST00000579472 76 ntBASIC0.11□□□□□ -2.39
TRAV40A0A0B4J280 MIR4639-201ENST00000584938 69 ntBASIC0.11□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.773-201ENST00000607168 90 ntBASIC0.11□□□□□ -2.39
TRAV40A0A0B4J280 AL137067.1-201ENST00000615933 120 ntBASIC0.11□□□□□ -2.39
TRAV40A0A0B4J280 MIR101-2-201ENST00000362195 79 ntBASIC0.1□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.150-201ENST00000363562 102 ntBASIC0.1□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.221-201ENST00000364248 96 ntBASIC0.1□□□□□ -2.39
TRAV40A0A0B4J280 RNU6-1229P-201ENST00000364295 107 ntBASIC0.1□□□□□ -2.39
TRAV40A0A0B4J280 Y_RNA.257-201ENST00000364596 102 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms