Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
TSC22D4Q9Y3Q8 SNORD115-37-201ENST00000363768 82 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 MIR520C-201ENST00000385005 87 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-447P-201ENST00000410293 104 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-1118P-201ENST00000410382 104 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-1076P-201ENST00000410397 104 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-355P-201ENST00000410427 104 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-791P-201ENST00000410467 104 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-519P-201ENST00000410590 108 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-705P-201ENST00000410601 104 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-1100P-201ENST00000410691 104 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-860P-201ENST00000410860 104 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-1217P-201ENST00000411276 104 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-785P-201ENST00000411324 104 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 AC027119.1-201ENST00000440877 241 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 RNA5SP182-201ENST00000516064 82 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 U6.90-201ENST00000614007 104 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 U6.70-201ENST00000620287 104 ntBASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TSC22D4Q9Y3Q8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TSC22D4Q9Y3Q8 RNA5SP276-201ENST00000362580 94 ntBASIC1.82□□□□□ -2.12
TSC22D4Q9Y3Q8 SNORD114-1-201ENST00000362705 72 ntBASIC1.82□□□□□ -2.12
TSC22D4Q9Y3Q8 Y_RNA.168-201ENST00000363740 102 ntBASIC1.82□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-480P-201ENST00000384332 107 ntBASIC1.82□□□□□ -2.12
TSC22D4Q9Y3Q8 snoU13.23-201ENST00000458863 104 ntBASIC1.82□□□□□ -2.12
TSC22D4Q9Y3Q8 RNA5SP481-201ENST00000516814 122 ntBASIC1.82□□□□□ -2.12
TSC22D4Q9Y3Q8 AC141846.1-201ENST00000568348 142 ntBASIC1.82□□□□□ -2.12
TSC22D4Q9Y3Q8 DEFB122-202ENST00000569013 197 ntBASIC1.82□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU4-32P-201ENST00000363404 141 ntBASIC1.81□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-788P-201ENST00000390967 104 ntBASIC1.81□□□□□ -2.12
TSC22D4Q9Y3Q8 AC108210.2-201ENST00000503681 201 ntBASIC1.81□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU7-41P-201ENST00000515917 61 ntBASIC1.81□□□□□ -2.12
TSC22D4Q9Y3Q8 MIR4299-201ENST00000577899 72 ntBASIC1.81□□□□□ -2.12
TSC22D4Q9Y3Q8 AC145423.2-201ENST00000610631 239 ntBASIC1.81□□□□□ -2.12
TSC22D4Q9Y3Q8 MIR4251-201ENST00000635819 61 ntBASIC1.81□□□□□ -2.12
TSC22D4Q9Y3Q8 RNA5SP133-201ENST00000363368 119 ntBASIC1.8□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-478P-201ENST00000363904 110 ntBASIC1.8□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-203P-201ENST00000384038 104 ntBASIC1.8□□□□□ -2.12
TSC22D4Q9Y3Q8 SNORD38B-201ENST00000384690 67 ntBASIC1.8□□□□□ -2.12
TSC22D4Q9Y3Q8 RNA5SP237-201ENST00000410414 113 ntBASIC1.8□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU4-83P-201ENST00000410863 133 ntBASIC1.8□□□□□ -2.12
TSC22D4Q9Y3Q8 AC133485.1-201ENST00000567176 124 ntBASIC1.8□□□□□ -2.12
TSC22D4Q9Y3Q8 AC090897.1-201ENST00000580909 226 ntBASIC1.8□□□□□ -2.12
TSC22D4Q9Y3Q8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.8□□□□□ -2.12
TSC22D4Q9Y3Q8 SNORD38B-202ENST00000625943 69 ntBASIC1.8□□□□□ -2.12
TSC22D4Q9Y3Q8 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.8□□□□□ -2.12
TSC22D4Q9Y3Q8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
TSC22D4Q9Y3Q8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TSC22D4Q9Y3Q8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TSC22D4Q9Y3Q8 HSBP1P2-201ENST00000299671 229 ntBASIC1.79□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-482P-201ENST00000391068 107 ntBASIC1.79□□□□□ -2.12
TSC22D4Q9Y3Q8 RNA5SP100-201ENST00000410903 110 ntBASIC1.79□□□□□ -2.12
TSC22D4Q9Y3Q8 RNA5SP59-201ENST00000410922 110 ntBASIC1.79□□□□□ -2.12
TSC22D4Q9Y3Q8 AL591806.2-201ENST00000433122 173 ntBASIC1.79□□□□□ -2.12
TSC22D4Q9Y3Q8 AL450471.1-201ENST00000447509 127 ntBASIC1.79□□□□□ -2.12
TSC22D4Q9Y3Q8 SNORA25.13-201ENST00000516395 103 ntBASIC1.79□□□□□ -2.12
TSC22D4Q9Y3Q8 SNORA31.17-201ENST00000516953 127 ntBASIC1.79□□□□□ -2.12
TSC22D4Q9Y3Q8 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.79□□□□□ -2.12
TSC22D4Q9Y3Q8 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.79□□□□□ -2.12
TSC22D4Q9Y3Q8 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.79□□□□□ -2.12
TSC22D4Q9Y3Q8 Y_RNA.57-201ENST00000362806 113 ntBASIC1.78□□□□□ -2.12
TSC22D4Q9Y3Q8 RNU6-129P-201ENST00000391022 107 ntBASIC1.78□□□□□ -2.12
TSC22D4Q9Y3Q8 AC009474.2-201ENST00000451383 136 ntBASIC1.78□□□□□ -2.12
TSC22D4Q9Y3Q8 SNORD4B-201ENST00000459083 72 ntBASIC1.78□□□□□ -2.12
TSC22D4Q9Y3Q8 RPS29P11-201ENST00000496507 171 ntBASIC1.78□□□□□ -2.12
TSC22D4Q9Y3Q8 AL662814.1-201ENST00000617364 121 ntBASIC1.78□□□□□ -2.12
TSC22D4Q9Y3Q8 Y_RNA.788-201ENST00000622394 112 ntBASIC1.78□□□□□ -2.12
TSC22D4Q9Y3Q8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.77□□□□□ -2.13
TSC22D4Q9Y3Q8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
TSC22D4Q9Y3Q8 MIR1236-201ENST00000408340 102 ntBASIC1.77□□□□□ -2.13
TSC22D4Q9Y3Q8 RNU7-85P-201ENST00000458851 63 ntBASIC1.77□□□□□ -2.13
TSC22D4Q9Y3Q8 AC004223.1-201ENST00000479840 271 ntBASIC1.77□□□□□ -2.13
TSC22D4Q9Y3Q8 AC015712.3-201ENST00000559380 164 ntBASIC1.77□□□□□ -2.13
TSC22D4Q9Y3Q8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.77□□□□□ -2.13
TSC22D4Q9Y3Q8 MIR4500-201ENST00000579472 76 ntBASIC1.77□□□□□ -2.13
TSC22D4Q9Y3Q8 SNRPGP19-201ENST00000603826 189 ntBASIC1.77□□□□□ -2.13
TSC22D4Q9Y3Q8 MIR8066-201ENST00000617280 78 ntBASIC1.77□□□□□ -2.13
TSC22D4Q9Y3Q8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
TSC22D4Q9Y3Q8 RNU6-315P-201ENST00000362666 107 ntBASIC1.76□□□□□ -2.13
TSC22D4Q9Y3Q8 SNORA16.1-201ENST00000364597 132 ntBASIC1.76□□□□□ -2.13
TSC22D4Q9Y3Q8 RNY1P2-201ENST00000364820 117 ntBASIC1.76□□□□□ -2.13
TSC22D4Q9Y3Q8 AC244023.1-201ENST00000426884 112 ntBASIC1.76□□□□□ -2.13
TSC22D4Q9Y3Q8 RNU6-548P-201ENST00000517083 115 ntBASIC1.76□□□□□ -2.13
TSC22D4Q9Y3Q8 AC138749.4-201ENST00000563970 127 ntBASIC1.76□□□□□ -2.13
TSC22D4Q9Y3Q8 AC242498.1-201ENST00000604134 111 ntBASIC1.76□□□□□ -2.13
TSC22D4Q9Y3Q8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.76□□□□□ -2.13
TSC22D4Q9Y3Q8 U7.4-201ENST00000614961 63 ntBASIC1.76□□□□□ -2.13
TSC22D4Q9Y3Q8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
TSC22D4Q9Y3Q8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
TSC22D4Q9Y3Q8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TSC22D4Q9Y3Q8 RNA5SP99-201ENST00000364020 114 ntBASIC1.75□□□□□ -2.13
TSC22D4Q9Y3Q8 RNU6-949P-201ENST00000384040 107 ntBASIC1.75□□□□□ -2.13
TSC22D4Q9Y3Q8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.75□□□□□ -2.13
TSC22D4Q9Y3Q8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.75□□□□□ -2.13
TSC22D4Q9Y3Q8 BX276092.1-201ENST00000427368 251 ntBASIC1.75□□□□□ -2.13
TSC22D4Q9Y3Q8 AC023790.1-201ENST00000482174 347 ntBASIC1.75□□□□□ -2.13
TSC22D4Q9Y3Q8 RNU6-850P-201ENST00000516934 103 ntBASIC1.75□□□□□ -2.13
TSC22D4Q9Y3Q8 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.75□□□□□ -2.13
TSC22D4Q9Y3Q8 U6.109-201ENST00000636749 87 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms