Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 AC141846.1-201ENST00000568348 142 ntBASIC0.65□□□□□ -2.31
GTF3C4Q9UKN8 MIR3121-201ENST00000579680 77 ntBASIC0.65□□□□□ -2.31
GTF3C4Q9UKN8 MIR4305-201ENST00000583252 102 ntBASIC0.65□□□□□ -2.31
GTF3C4Q9UKN8 AC021443.1-201ENST00000604478 211 ntBASIC0.65□□□□□ -2.31
GTF3C4Q9UKN8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.65□□□□□ -2.31
GTF3C4Q9UKN8 RNU6-235P-201ENST00000362644 107 ntBASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 Y_RNA.464-201ENST00000384282 110 ntBASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 MIR520F-201ENST00000384824 87 ntBASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 RNU6-1307P-201ENST00000391012 103 ntBASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 RNU6-257P-201ENST00000410238 98 ntBASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 RNU6-735P-201ENST00000410612 107 ntBASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 AC244098.3-201ENST00000424803 96 ntBASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 RNU7-164P-201ENST00000459221 62 ntBASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 RNU6-781P-201ENST00000516377 101 ntBASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 RNU4-54P-201ENST00000516428 129 ntBASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 RNY4P20-201ENST00000516678 93 ntBASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 AC133485.4-201ENST00000561835 220 ntBASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 AC138907.4-201ENST00000570107 226 ntBASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 MIR4804-201ENST00000581683 73 ntBASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 MIR3133-201ENST00000583157 78 ntBASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
GTF3C4Q9UKN8 Y_RNA.114-201ENST00000363265 113 ntBASIC0.63□□□□□ -2.31
GTF3C4Q9UKN8 MIR520H-201ENST00000385126 88 ntBASIC0.63□□□□□ -2.31
GTF3C4Q9UKN8 MIR513C-201ENST00000401352 84 ntBASIC0.63□□□□□ -2.31
GTF3C4Q9UKN8 MTND4LP9-201ENST00000427694 174 ntBASIC0.63□□□□□ -2.31
GTF3C4Q9UKN8 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.63□□□□□ -2.31
GTF3C4Q9UKN8 RNU7-56P-201ENST00000458744 62 ntBASIC0.63□□□□□ -2.31
GTF3C4Q9UKN8 RNU7-113P-201ENST00000459273 62 ntBASIC0.63□□□□□ -2.31
GTF3C4Q9UKN8 RNA5SP33-201ENST00000516687 98 ntBASIC0.63□□□□□ -2.31
GTF3C4Q9UKN8 AC018659.1-201ENST00000551083 169 ntBASIC0.63□□□□□ -2.31
GTF3C4Q9UKN8 AC105081.1-201ENST00000617727 106 ntBASIC0.63□□□□□ -2.31
GTF3C4Q9UKN8 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.63□□□□□ -2.31
GTF3C4Q9UKN8 Y_RNA.280-201ENST00000364765 112 ntBASIC0.62□□□□□ -2.31
GTF3C4Q9UKN8 Y_RNA.298-201ENST00000364960 107 ntBASIC0.62□□□□□ -2.31
GTF3C4Q9UKN8 Y_RNA.488-201ENST00000384403 102 ntBASIC0.62□□□□□ -2.31
GTF3C4Q9UKN8 Y_RNA.531-201ENST00000384589 121 ntBASIC0.62□□□□□ -2.31
GTF3C4Q9UKN8 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
GTF3C4Q9UKN8 Y_RNA.588-201ENST00000391254 102 ntBASIC0.62□□□□□ -2.31
GTF3C4Q9UKN8 RNA5SP222-201ENST00000411039 105 ntBASIC0.62□□□□□ -2.31
GTF3C4Q9UKN8 RNU7-102P-201ENST00000458948 62 ntBASIC0.62□□□□□ -2.31
GTF3C4Q9UKN8 RNU6-977P-201ENST00000516411 103 ntBASIC0.62□□□□□ -2.31
GTF3C4Q9UKN8 MIR3152-201ENST00000579801 74 ntBASIC0.62□□□□□ -2.31
GTF3C4Q9UKN8 PVT1_3.1-201ENST00000620853 95 ntBASIC0.62□□□□□ -2.31
GTF3C4Q9UKN8 MIR6513-201ENST00000621188 64 ntBASIC0.62□□□□□ -2.31
GTF3C4Q9UKN8 Y_RNA.36-201ENST00000362602 112 ntBASIC0.61□□□□□ -2.31
GTF3C4Q9UKN8 RNA5SP499-201ENST00000363982 119 ntBASIC0.61□□□□□ -2.31
GTF3C4Q9UKN8 Y_RNA.540-201ENST00000384638 111 ntBASIC0.61□□□□□ -2.31
GTF3C4Q9UKN8 MIR7-2-201ENST00000384970 110 ntBASIC0.61□□□□□ -2.31
GTF3C4Q9UKN8 MIR125B2-201ENST00000385128 89 ntBASIC0.61□□□□□ -2.31
GTF3C4Q9UKN8 RNA5SP237-201ENST00000410414 113 ntBASIC0.61□□□□□ -2.31
GTF3C4Q9UKN8 RNU6-1086P-201ENST00000410930 100 ntBASIC0.61□□□□□ -2.31
GTF3C4Q9UKN8 RNU7-79P-201ENST00000516082 62 ntBASIC0.61□□□□□ -2.31
GTF3C4Q9UKN8 SNORD67.1-201ENST00000516618 108 ntBASIC0.61□□□□□ -2.31
GTF3C4Q9UKN8 SNORA25.16-201ENST00000516741 121 ntBASIC0.61□□□□□ -2.31
GTF3C4Q9UKN8 AP001328.1-201ENST00000528550 176 ntBASIC0.61□□□□□ -2.31
GTF3C4Q9UKN8 AL137067.1-201ENST00000615933 120 ntBASIC0.61□□□□□ -2.31
GTF3C4Q9UKN8 MIR8066-201ENST00000617280 78 ntBASIC0.61□□□□□ -2.31
GTF3C4Q9UKN8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
GTF3C4Q9UKN8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.61□□□□□ -2.31
GTF3C4Q9UKN8 SNORD114-26-201ENST00000363543 72 ntBASIC0.6□□□□□ -2.31
GTF3C4Q9UKN8 SNORD18B-201ENST00000365659 72 ntBASIC0.6□□□□□ -2.31
GTF3C4Q9UKN8 Y_RNA.568-201ENST00000384742 113 ntBASIC0.6□□□□□ -2.31
GTF3C4Q9UKN8 SNORD93-201ENST00000408813 74 ntBASIC0.6□□□□□ -2.31
GTF3C4Q9UKN8 Y_RNA.630-201ENST00000411370 108 ntBASIC0.6□□□□□ -2.31
GTF3C4Q9UKN8 AL022718.1-201ENST00000412004 84 ntBASIC0.6□□□□□ -2.31
GTF3C4Q9UKN8 AC098934.3-201ENST00000430450 190 ntBASIC0.6□□□□□ -2.31
GTF3C4Q9UKN8 RNU7-35P-201ENST00000517174 62 ntBASIC0.6□□□□□ -2.31
GTF3C4Q9UKN8 MIR4491-201ENST00000581087 68 ntBASIC0.6□□□□□ -2.31
GTF3C4Q9UKN8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.6□□□□□ -2.31
GTF3C4Q9UKN8 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
GTF3C4Q9UKN8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.6□□□□□ -2.31
GTF3C4Q9UKN8 Y_RNA.13-201ENST00000362403 112 ntBASIC0.59□□□□□ -2.31
GTF3C4Q9UKN8 RNA5SP347-201ENST00000362445 119 ntBASIC0.59□□□□□ -2.31
GTF3C4Q9UKN8 SNORD115-2-201ENST00000362842 82 ntBASIC0.59□□□□□ -2.31
GTF3C4Q9UKN8 SNORD115-20-201ENST00000365099 82 ntBASIC0.59□□□□□ -2.31
GTF3C4Q9UKN8 SNORA36.2-201ENST00000384004 127 ntBASIC0.59□□□□□ -2.31
GTF3C4Q9UKN8 MIR18B-201ENST00000454574 71 ntBASIC0.59□□□□□ -2.31
GTF3C4Q9UKN8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.59□□□□□ -2.31
GTF3C4Q9UKN8 RNU7-107P-201ENST00000459121 61 ntBASIC0.59□□□□□ -2.31
GTF3C4Q9UKN8 RNU6-971P-201ENST00000516920 106 ntBASIC0.59□□□□□ -2.31
GTF3C4Q9UKN8 RNU7-156P-201ENST00000517214 74 ntBASIC0.59□□□□□ -2.31
GTF3C4Q9UKN8 AP001340.1-201ENST00000624405 217 ntBASIC0.59□□□□□ -2.31
GTF3C4Q9UKN8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
GTF3C4Q9UKN8 RNU6-403P-201ENST00000363163 104 ntBASIC0.58□□□□□ -2.32
GTF3C4Q9UKN8 RNU6-949P-201ENST00000384040 107 ntBASIC0.58□□□□□ -2.32
GTF3C4Q9UKN8 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
GTF3C4Q9UKN8 MIR936-201ENST00000401264 98 ntBASIC0.58□□□□□ -2.32
GTF3C4Q9UKN8 MIR1263-201ENST00000408324 86 ntBASIC0.58□□□□□ -2.32
GTF3C4Q9UKN8 MIR1257-201ENST00000408490 117 ntBASIC0.58□□□□□ -2.32
GTF3C4Q9UKN8 RNA5SP261-201ENST00000410536 106 ntBASIC0.58□□□□□ -2.32
GTF3C4Q9UKN8 MTATP6P21-201ENST00000440681 189 ntBASIC0.58□□□□□ -2.32
GTF3C4Q9UKN8 RN7SKP19-201ENST00000516016 252 ntBASIC0.58□□□□□ -2.32
GTF3C4Q9UKN8 RNU6-1234P-201ENST00000516877 103 ntBASIC0.58□□□□□ -2.32
GTF3C4Q9UKN8 MTND5P34-201ENST00000568888 325 ntBASIC0.58□□□□□ -2.32
GTF3C4Q9UKN8 Y_RNA.773-201ENST00000607168 90 ntBASIC0.58□□□□□ -2.32
GTF3C4Q9UKN8 AC011603.4-201ENST00000611325 277 ntBASIC0.58□□□□□ -2.32
GTF3C4Q9UKN8 Y_RNA.42-201ENST00000362660 108 ntBASIC0.57□□□□□ -2.32
GTF3C4Q9UKN8 RNU6-945P-201ENST00000383947 107 ntBASIC0.57□□□□□ -2.32
GTF3C4Q9UKN8 MT-TF-201ENST00000387314 71 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 256.2 ms